Naga_100063g12, gene6402 (gene) Nannochloropsis gaditana

Overview
NameNaga_100063g12
Unique Namegene6402
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:103863..106392 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100063g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:103863..106392 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00570NO16G00570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6623rna6623-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6623rna6623Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6623

>rna6623-protein ID=rna6623-protein|Name=rna6623|organism=Nannochloropsis gaditana|type=polypeptide|length=787bp
MRSSKIRKVAEVEVAFPLSSPPPSSASASGTPSSILTTIRDIERGILDGQ
DLQHLNGLTLLLVHVRALLQSMIGALEEESGAEKVLNNKDREVAGLQSMH
ALRRIFTALVNRGDVRKPITKDSTTASSPVNAITPDTSLAKTSGALGKGE
VLSGASRAQGRKRAGHVEIQEHQNETHAVNAEESLRIFRQWAYRQYATFL
SLLLDLVEGKAHDIAHHSSSSSSSSSLTSIKPAFSIKVRIRAAALRTIME
MVKVESVVLHKNYRSFGHELFYRLLMGLLSSSTNSISSRHSHKYGNSDKE
EESRKVVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGR
CRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALLP
NQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVPNVASLSA
HRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTA
AYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHR
ARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVV
LRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKH
EGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPK
KPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRKRRRKGLEGGQEE
GVALAHERKPRSGKLFQAGDVFDGLFVLPSLSAVRKE
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Synonyms
Publications