NO16G00570, NO16G00570 (gene) Nannochloropsis oceanica

Overview
NameNO16G00570
Unique NameNO16G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2826
Alignment locationchr16:199512..202337 -

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Properties
Property NameValue
DescriptionCCAAT-binding factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:199512..202337 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0042254ribosome biogenesis
Vocabulary: INTERPRO
TermDefinition
IPR027193Noc4
IPR005612CCAAT-binding_factor
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO16G00570 vs. NCBI_GenBank
Match: EWM24070.1 (CCAAT-binding factor [Nannochloropsis gaditana])

HSP 1 Score: 535.8 bits (1379), Expect = 2.300e-148
Identity = 367/821 (44.70%), Postives = 456/821 (55.54%), Query Frame = 0
Query:   14 SSTSGITTSAKSSSTSIFGRIREVERGVVDGQDLHHMNGLIELLGHVRRLFPAEHASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALRRIFLALVKRGDVCKPLT--TTIASDGKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGRDGVQ-----------KDALDEFNRWIYGQYQSFLSLLLDLIDPSS-----------PXXXCQSFSPSSSF-LRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYRLIARLVCCSSK----------GSANKSKXXXXXXXXXQ-AELMEVLRVDYILPYCDVRYWLLKSLRVLAG---KEGGREDGKDGQEA-RTAAILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTL---DKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRKVRKDQMGEGGKRGXXXXXXXXXXXXEGGVALAFEKMARPDKLFQPGDVFDGLFALPAVAVL 792
            SS    + SA  + +SI   IR++ERG++DGQDL H+NGL  LL HVR L  +   ++                             MHALRRIF ALV RGDV KP+T  +T AS                                     G   +Q           +++L  F +W Y QY +FLSLLLDL++  +            XXX  S  P+ S  +R +AAALRTIME+VKVESVV  K +R FG++LFYRL+  L+  S+           G+++K +           A+L+EVLRVDYI PYCDVRYWLLK L + A    KEG      + +EA RT   LK+LM+V + + E+ M   WVS   E+GDGAL+P  QG  XXXXXXXXX                                G   A ERVP+VA LS HRK LE AW+  LRLP   P+LYRS  Q VARHVLE +P PL LADFFTA+YAQGGLTA++ALEGLFVLMQAHNLEYP FY SLYRLL+PGPQ+LYSRHR+RFF+LLRLCL+S  VPAH+VAAFLKRL RL+L AP PS+IF LSL+ +VLRAHP+C AL+ R+  L   D+A A  +D FDP  +DPA AF                                               +  IQTSLWEVAALQ HYH +VA LAKGLE++TPEDPK    L  +M+ +ASYTY +LF  EGK  ++ +K++M      G            E GVALA E+  R  KLFQ GDVFDGLF LP+++ +
Sbjct:   19 SSPPPSSASASGTPSSILTTIRDIERGILDGQDLQHLNGLTLLLVHVRALLQSMIGAL-------EEESGAEKVLNNKDREVAGLQSMHALRRIFTALVNRGDVRKPITKDSTTASSPVNAITPDTSLAKTSGALGKGEVLSGASRAQGRKRAGHVEIQEHQNETHAVNAEESLRIFRQWAYRQYATFLSLLLDLVEGKAHDIAHXXXXXXXXXXXXSIKPAFSIKVRIRAAALRTIMEMVKVESVVLHKNYRSFGHELFYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALLPN-QGXXXXXXXXXXXGWDWSGDEGMGHEEDEEAL-------------GKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQA--VDRFDPGVEDPAAAFQM-------------------------TEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPK--KPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMA-----GRKRRRKGLEGGQEEGVALAHERKPRSGKLFQAGDVFDGLFVLPSLSAV 784          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: GAX13933.1 (U3 small nucleolar RNA-associated protein 19 [Fistulifera solaris])

HSP 1 Score: 178.7 bits (452), Expect = 7.000e-41
Identity = 165/514 (32.10%), Postives = 247/514 (48.05%), Query Frame = 0
Query:  281 LMEVLRVDYILPYCDVRYWLLKSLRVLAGKEGGRE-DGKDGQEARTAAILKMLMLVTVEKNEADMVS-FWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLV-SPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGL----EVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRKVRKDQMGEGGKRGXXXXXXXXXXXXEGGVALAFEKMARPDKLFQPGDVFDGLFALPA 788
            +  +L+ +++ PY DV+Y+ + ++   A +  G++ +GKD  E R   IL++L ++ +  ++ D+ S   + F   E     VPK                XXXXXXXXXXXX                   AA A + +    ++S HR    +AW+A L+L    P   +  ++F+  +VL  +PHPL+ +DFF  +Y  GG+ ++LAL+GLF+L+  H LEYP FY  LYRL+   P LLY ++R+RFF+LL  CL  +  +P H+VAAF+KRL R  L+AP PS++F+L+L   +LR     + L+ R     K      D FD    DP  A                                                 + +Q+SLWE+ AL+ HY+P+V+ LAK +    E+STP         + ++D+  ++TY  LF QE    R  RK Q G                  +G V L F    RPD LF   DVF GL A+P+
Sbjct:  134 IRNMLQAEFLNPYRDVQYYTMIAIARCAHELYGKQMEGKDIAE-RAERILEILTMMQLPTSQKDLDSQGGLLFCPPED---AVPKDDSNDDAEAIGFDDASXXXXXXXXXXXXPAAKRAKI----------SAAKAIKPMFTFQKVSCHRLAWSKAWLAMLKL-DLPPIALKKALRFLPGNVLPLVPHPLRFSDFFMEAYNHGGVVSVLALDGLFLLITTHGLEYPNFYKQLYRLIT--PSLLYVKYRTRFFRLLDKCLTRNEMLPTHVVAAFVKRLLRCTLVAPVPSVLFVLALCSNLLRKRLEMACLVHRNDDEWK------DGFDAETDDPEEA-------------------------------------------------NALQSSLWEICALERHYYPAVSTLAKSVGREQELSTP---------LYNLDDFLAHTYQSLFEQE----RNKRKQQKG------------------KGTVPLTF---VRPDSLFAEKDVFHGLLAVPS 541          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: CBJ31577.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 178.3 bits (451), Expect = 9.200e-41
Identity = 132/317 (41.64%), Postives = 181/317 (57.10%), Query Frame = 0
Query:  410 GAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGK 727
            GA     R+  + RL  H+K   +AW+A LRLP   P+LYR  + F+  +V+  MP P++LADF TA+Y  GG+ ++LAL+ LF+LMQAH+L+YP FY SLYRL+     ++Y+++R+RFF+++ LCL S  VPA++VAAFLKR  R  L APP   +F L+L+  ++  HP C  LI         S   L T            ++         XXXXXXXXXXXXXXXXXX             E+      + TSLWE+AALQ HYHP VA LA+G  +   +  +          +LA+ TY  LF Q G+
Sbjct:  476 GAEGKKMRMLAIERLRYHKKAFGDAWLACLRLP-LPPALYRRVLLFLPGNVIPYMPSPVRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVT--SDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLKNRPLPSSDGSAXXXXXXXXXXXXXXXXXXDEYDPGC------EDTKGAGAMNTSLWELAALQNHYHPGVATLARGF-LREADKKEAEGEAFAGPSKLAAETYQSLFDQAGR 782          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: GAX16792.1 (U3 small nucleolar RNA-associated protein 19 [Fistulifera solaris])

HSP 1 Score: 175.6 bits (444), Expect = 6.000e-40
Identity = 174/513 (33.92%), Postives = 256/513 (49.90%), Query Frame = 0
Query:  281 LMEVLRVDYILPYCDVRYWLLKSLRVLAGKEGGRE-DGKDGQEARTAAILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLV-SPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGL----EVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRKVRKDQMGEGGKRGXXXXXXXXXXXXEGGVALAFEKMARPDKLFQPGDVFDGLFALPA 788
            +  +L+ +++ PY DV+Y+ + ++   A +  G++ +GKD  E R   IL++L ++ +  ++ D+ S        +G    VP                        XXXXXXXXXXXXXXXXXXXXXX  AA A + +    ++S HR    +AW+A L+L     +L +  ++F+  +VL  +PHPL+ +DFF  +Y   G+ ++LAL+GLF+L+ AH LEYP FY  LYRL+   P LLY ++R+RFF+LL  CL  +  +P HIVAAF+KRL R  L+AP PS++F+L+L   +LR  P  + L+ R     K      D FD    DP  A                                                 + +Q+SLWE+ AL+ HY+P+V+ LAK +    E+STP         + ++D+  ++TY  LF QE    R  RK Q G                  +  V L F    RPD LF   DVF GL A+P+
Sbjct:  135 IRNMLQAEFLNPYRDVQYYTMIAIARCAHELYGQQTEGKDIAE-RAERILEILTMMQLPTSQKDLDS--------QGGLLFVPPEDA----VPQDDGNDEAEAIDYNXXXXXXXXXXXXXXXXXXXXXXISAAKAIKPMFTFQKVSCHRLAWSKAWLAVLKLDLPLVAL-KKALRFLPGNVLPHVPHPLRFSDFFMEAYNHNGVVSVLALDGLFLLITAHGLEYPNFYKQLYRLIT--PSLLYVKYRTRFFRLLDKCLTRNEMLPTHIVAAFVKRLLRSTLVAPVPSVLFVLALCSNLLRKRPEMACLVHRNDDEWK------DGFDAETDDPEEA-------------------------------------------------NALQSSLWELGALERHYYPAVSTLAKSVGREQELSTP---------LYNLDDFLAHTYQSLFEQE----RNKRKQQKG------------------KTTVPLTF---VRPDSLFAEKDVFHGLLAVPS 542          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: XP_002289604.1 (hypothetical protein THAPSDRAFT_268596 [Thalassiosira pseudonana CCMP1335] >EED93141.1 hypothetical protein THAPSDRAFT_268596 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 170.6 bits (431), Expect = 1.900e-38
Identity = 123/376 (32.71%), Postives = 189/376 (50.27%), Query Frame = 0
Query:  409 EGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLV-SPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRKVRKDQMGEGGKRGXXXXXXXXXXXXEGGVALAFEKMARPDKLFQPGDVFDGLF 784
            +G  V T + P+     +HR  L+EAW+++LRLP+  P   +  +Q ++ +VL   P PL+ A++FT S    GLTA+L+L GLF+LM  H LEYP+FY+SLY+LL   P++LY++HR+RF +LL   L  +  +PA++VA+F K+LCRLAL+ PP   +F+L+L+  +LR H  C+ LI R                    +P +   +                                        +++     +++SLWE+ AL  HYHP+++ LAK       ED KT    + DM++  ++TY  LF QE   +++V  D     GK              +G V+L F     P  LF   DVF  +F
Sbjct:    2 DGDQVVTWQQPY-----KHRNALQEAWLSTLRLPNLPPRTQKRVLQHLSTYVLGVCPSPLRFAEYFTRSNNNNGLTAILSLHGLFILMLDHQLEYPQFYTSLYQLL--HPRILYTKHRTRFLRLLSKSLSGNSMLPAYVVASFCKKLCRLALVGPPSGGLFVLALVSNLLRKHGECACLIHR------------------KGNPEDGLMEDVYVEEV---------------------------------DDLVKTRALESSLWELDALVKHYHPAISALAKSCGT---EDDKT---PLYDMEDFMAHTYKSLFEQE---KKRVGGDDKA-SGKGNNFDGGKGSKGGMKGKVSLTF---VEPKGLFGEDDVFGCMF 306          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: GAY01537.1 (nucleolar complex protein 4 [Pythium insidiosum])

HSP 1 Score: 167.5 bits (423), Expect = 1.600e-37
Identity = 171/585 (29.23%), Postives = 262/585 (44.79%), Query Frame = 0
Query:  163 SDGRDGVQKDALDEFNRWIYGQYQSFLSLLLDLIDPSSPXXXCQSFSPSSSFLRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYRLIARLVCCSSKGSANKSKXXXXXXXXXQAELMEVLRVDYILPYCDVRYWLLKSLRVLAG---------KEGGREDGKDGQEARTAA-ILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVP--HVARLSEHRKVLEEAWVASL--RLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTL---DKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRK 731
            SD +     DA+  F +W++G Y +F+  +L+ +                     Q  ALRT+ME V  E  +R      FGN+ F R++ +L                        E+  V + +Y+  Y DV+Y++L++L  L           K+ G+ D  D  +    A  L++L +V + +  +D+ +F V    E    A V  A                   XXXXXXXXXXXXXXXXXXX        A    ++ P   +  L +HR V    W+A+L  RLP+     Y+  +  +   ++  + +PL L+DF T SY+ GG+T+LLAL GLF+L+  HN +YP FY+ LY LL   P LL ++ R RFF LL L L S  +PA+++AAF KRL R AL A P +IIF++ ++  ++  H  C  LI R+  +   ++A     +    NA D A                                              +    + +Q+SLWE+ +++ HY+  VA  AK  E       + L     D+D+    TY   F Q+ K++ K
Sbjct:   67 SDAKKTKSTDAVATFRKWLWGIYVAFIKEMLEWLRHGQDE-------------HVQVNALRTLMEFVSREGDLRGASANVFGNETFMRVVQQLAALPK----------------LSGEVASVFKGEYVGAYIDVQYYMLRNLTQLLDADLDAKKKKKDEGKSDATDENDMTLIANALRLLNMVQMPEKPSDIKTFLVEVKPE----ARVADA-------------------XXXXXXXXXXXXXXXXXXXPVVGQKRKAKTEEDKAPKGSLYSLKQHRHVYSMCWIAALRHRLPT---DAYKKVLTQLPFEIMPHLENPLLLSDFLTDSYSIGGVTSLLALNGLFLLITEHNFDYPDFYNKLYVLL-QDPTLLTAKQRFRFFGLLELFLSSTHLPAYLIAAFAKRLSRAALTAEPGAIIFIIPMVYNLILRHKECLQLIHRSAAVTAAEQAKQRREELSSANAVDAA---------------------ARQLSRKTMAVVLKDGHDPYKSEEADPQQSNALQSSLWEIYSMRHHYNAEVAAKAKLFE-------EKLRSQFLDLDDCMEVTYKSTFEQQLKRKTK 567          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: GAX96795.1 (nucleolar complex protein 4 [Pythium insidiosum])

HSP 1 Score: 164.9 bits (416), Expect = 1.100e-36
Identity = 170/585 (29.06%), Postives = 260/585 (44.44%), Query Frame = 0
Query:  163 SDGRDGVQKDALDEFNRWIYGQYQSFLSLLLDLIDPSSPXXXCQSFSPSSSFLRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYRLIARLVCCSSKGSANKSKXXXXXXXXXQAELMEVLRVDYILPYCDVRYWLLKSLRVLAG---------KEGGREDGKDGQEARTAA-ILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVP--HVARLSEHRKVLEEAWVASL--RLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTL---DKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRK 731
            SD +     DA+  F +W++G Y +F+  +L+ +                     Q  ALRT+ME V  E  +R      FGN+ F R++ +L                        E+  V + +Y+  Y DV+Y++L++L  L           K+ G  D  D  +    A  L++L +V + +  +D+ +F V    E    A V  A                   XXXXXXXXXXXXXXXXXXXX       A    ++ P   +  L +HR V    W+A+L  RLP+     Y+  +  +   ++  + +PL L+DF T SY+ GG+T+LLAL GLF+L+  HN +YP FY+ LY      P LL ++ R RFF LL L L S  +PA+++AAF KRL R AL A P +IIF++ ++  ++  H  C  LI R+  +   ++A     +    NA D A                                              +    + +Q+SLWE+ +++ HY+  VA  AK  E       + L     D+D+    TY   F Q+ K++ K
Sbjct:   67 SDAKKAKSTDAVATFRKWLWGIYVAFIKEMLEWLRHGQDE-------------HVQVNALRTLMEFVSREGDLRGASANVFGNETFMRVVQQLAALPK----------------LSGEVASVFKGEYVGAYIDVQYYMLRNLTQLLDADLDAKKKKKDEGNSDATDENDMTLIANALRLLNMVQMPEKPSDIKTFLVEVKPE----ARVADA-------------------XXXXXXXXXXXXXXXXXXXXVVGQKRKAKTEEDKAPKGSLYSLKQHRHVYSMCWIAALRHRLPT---DAYKKVLTQLPFEIMPHLENPLLLSDFLTDSYSIGGVTSLLALNGLFLLITEHNFDYPDFYNKLY-----DPTLLTAKQRFRFFGLLELFLSSTHLPAYLIAAFAKRLSRAALTAEPGAIIFIIPMVYNLILRHKECLQLIHRSAAVTAAEQAKQRREELSSANAVDAA---------------------ARQLSRKTMAVVLKDGHDPYKSEEADPQQSNALQSSLWEIYSMRHHYNAEVAAKAKLFE-------EKLRSQFLDLDDCMEVTYKSTFEQQLKRKTK 563          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: XP_009519551.1 (hypothetical protein PHYSODRAFT_485830 [Phytophthora sojae] >EGZ24263.1 hypothetical protein PHYSODRAFT_485830 [Phytophthora sojae])

HSP 1 Score: 162.9 bits (411), Expect = 4.000e-36
Identity = 149/569 (26.19%), Postives = 243/569 (42.71%), Query Frame = 0
Query:  168 GVQKDALDEFNRWIYGQYQSFLSLLLDLIDPSSPXXXCQSFSPSSSFLRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYRLIARLVCCSSKGSANKSKXXXXXXXXXQAELMEVLRVDYILPYCDVRYWLLKSLRVLAGKEGGREDGKDGQEARTAA-ILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRA---LTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSV--STIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRK 731
            G    A+D+F+RW++  Y  F+  +L            Q    + +    +  ALRT+ME V  E  +R      FGN+ F R++  L       + +K K           EL+ V + +Y+  Y DV+Y+ LK+L  +  K   +E+  + +  +     L+ML +V +  ++ ++ SF V     E   A +P+ +                                        XXX        +   +  + +HR     AW+A LR      + Y+  +  +   ++  + +PL LADF T SY+ GG+T+LLAL  LF+L++ +N + P FY+ LY LL   P L  ++ R RFF LL L L S  +PA+ VAAF KRL R AL A P +I+F++ ++  ++  H  C  LI R       +KA+    +     A D A                                            N+E+  +  +  Q+SLWE+  ++ HY+  VA+ A+  E       + L H   D+DE    TY  LF ++ K++ K
Sbjct:   74 GGDSQAIDKFHRWLWDVYVGFIKEML------------QWIGDAEADANLRVGALRTLMEFVSREGEIRGGNGPLFGNETFTRVVQEL------ATTDKLK----------GELVSVFKGEYVAAYMDVQYYTLKNLAQILDKAHEKEETTEEENLKLVGNALRMLNMVQMPYDDKEITSFLV-----EPKDASLPEQE------------------------------------IVSSXXXXXXXXXXXKTRGLRNVKQHRHAFSLAWIAVLR-HKLPQTSYKKVLVQLPDEIMPHLTNPLLLADFLTDSYSIGGVTSLLALNSLFILIKDYNFDSPDFYNKLYALL-DDPTLYSAKQRDRFFGLLNLFLSSTHLPAYTVAAFAKRLSRSALTAEPGAILFIIPMVYNLILRHKECLQLIHRTGAFTAAEKAAKRREELASGTAVDAA-----------------------AKKLSKEKTELVLKDGHDPFVNDELDPIKCNAWQSSLWELYTMKHHYNADVAVKARMFE-------EKLRHQFVDVDESMEITYKSLFDKQLKRKEK 541          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: POM67091.1 (Nucleolar complex protein 4 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 162.9 bits (411), Expect = 4.000e-36
Identity = 146/568 (25.70%), Postives = 235/568 (41.37%), Query Frame = 0
Query:  168 GVQKDALDEFNRWIYGQYQSFLSLLLDLIDPSSPXXXCQSFSPSSSFLRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYRLIARLVCCSSKGSANKSKXXXXXXXXXQAELMEVLRVDYILPYCDVRYWLLKSLRVLAGKEGGREDGKDGQEARTAAILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRA---LTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSV--STIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRK 731
            G    A+D+F  WI+  Y +F+  +L  +  +           + S LR    ALRT+ME V  E  +R      FGN+ F R++  L                      + EL  V + +Y+  Y DV+Y++LK+L  +      +E+ +       A  L+ML +V +  +  ++ SF V            PK                                                   T++   +  + +H+     AW+A LR      + Y+  +  +   ++  + +PL LADF T SY+ GG+T+LLAL  LF+L+Q +N + P FY+ LY LL   P L  ++ R RFF LL L L S  +PA+ VAAF KRL R AL A P +I+F++ ++  ++  H  C  LI R       +KA+    +    +A D A                                            N+E+  +  + +Q+SLWE+  ++ HY+  VA+ A+  E       + L H   D+DE    TY  LF ++ K++ K
Sbjct:   72 GSDTQAIDKFRSWIWDVYVNFIQEMLQWLGDAQ----------TDSNLR--VGALRTLMEFVSREGEIRGGNAPTFGNETFTRVVQELTTTEK----------------LKGELASVFKGEYVGAYMDVQYYMLKNLAQILDSALSKENDETTDLTLVANALRMLGMVQMPYDAEEITSFLVE-----------PKNSN------------LSEQELVSSDNESDSDEEVLATAGTKRKTASDTKKTTKKTRGLRSVKQHQHAFSLAWIAVLR-HKLPQASYKKVLVQLPDEIMPHLVNPLLLADFLTDSYSIGGVTSLLALNSLFILIQDYNFDSPDFYNKLYALL-DDPTLYSAKQRDRFFGLLSLFLSSTHLPAYTVAAFAKRLSRSALTAEPGAILFIIPMVYNLILRHKECLQLIHRTGAFTAAEKAAKRREELSSGSAVDAA-----------------------AKKLSNEKTALVLKDGHDPFENDEIDPIKCNALQSSLWELYTMKHHYNADVALKARMFE-------EKLRHQFVDVDESMEITYKSLFDKQLKRKEK 556          
BLAST of NO16G00570 vs. NCBI_GenBank
Match: ETM49915.1 (hypothetical protein L914_05929 [Phytophthora parasitica])

HSP 1 Score: 162.5 bits (410), Expect = 5.200e-36
Identity = 166/568 (29.23%), Postives = 266/568 (46.83%), Query Frame = 0
Query:  168 GVQKDALDEFNRWIYGQYQSFLSLLLDLIDPSSPXXXCQSFSPSSSFLRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYRLIARLVCCSSKGSANKSKXXXXXXXXXQAELMEVLRVDYILPYCDVRYWLLKSLRVLAGKEGGREDGKDGQEARTAAILKMLMLVTVEKNEADMVSFWVSFAGEEGDGALVPKAQGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYRSTIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHNLEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAFLKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRA---LTLDKASAMHLDTFDPNAQDPANAFHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEEVGSV--STIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPKTLNHLVTDMDELASYTYADLFLQEGKQRRK 731
            G    A+D+F++W++  Y +F+  +L  +  +           + S LR    ALRT+ME V  E  +R +    FGN+ F R++  L        A   K         + EL  V + +Y+  Y DV+Y++LK+L  +       ++ ++      A  L++L +V +  +  ++ SF V     E   + +P+ +                  XXXXXXXXXXXXXXXXXXXX     +  A  T++   +  + +H+     AW+A LR      + Y+  +  +   ++  + +PL LADF T SY+ GG+T+LLAL  LF+L+Q +N + P FY+ LY LL   P L  ++ R RFF LL L L S  +PA+ VAAF KRL R AL A P +I+F++ ++  ++  H  C  LI R       +KA+    +    +A D A                                            N+E+  +  + +Q+SLWE+  ++ HY+  VA+ A+  E       + L H   D+DE    TY  LF ++ K++ K
Sbjct:   74 GTATQAIDKFHQWLWDVYVNFIKEMLQWLGDAQ----------ADSNLR--VGALRTLMEFVSREGEIRGENAPAFGNETFARVVQEL--------AKTEK--------LKGELASVFKGEYVGAYMDVQYYMLKNLAQIL------DNAEEQDLTLVANALRLLGMVQMPYDAEEITSFLV-----EPKNSNLPEQE-----------------LXXXXXXXXXXXXXXXXXXXXKRKAADSKANKTKKTRGLHSVKQHQHAFSLAWIAVLR-HKLPQASYKKVLVQLPDDIMPHLVNPLLLADFLTDSYSIGGVTSLLALNSLFILIQDYNFDSPDFYNKLYALL-DDPSLYSAKQRDRFFGLLNLFLSSTHLPAYTVAAFAKRLSRSALTAEPGAILFIIPMVYNLILRHKECLQLIHRTGAFTAAEKAAKRREELSSGSAVDAA-----------------------AKKLSSEKTELVLKDGHDPFINDELDPIKCNALQSSLWELYTMKHHYNADVALKARMFE-------EKLRHQFVDVDESMEITYKSLFDKQLKRKEK 553          
The following BLAST results are available for this feature:
BLAST of NO16G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24070.12.300e-14844.70CCAAT-binding factor [Nannochloropsis gaditana][more]
GAX13933.17.000e-4132.10U3 small nucleolar RNA-associated protein 19 [Fist... [more]
CBJ31577.19.200e-4141.64conserved unknown protein [Ectocarpus siliculosus][more]
GAX16792.16.000e-4033.92U3 small nucleolar RNA-associated protein 19 [Fist... [more]
XP_002289604.11.900e-3832.71hypothetical protein THAPSDRAFT_268596 [Thalassios... [more]
GAY01537.11.600e-3729.23nucleolar complex protein 4 [Pythium insidiosum][more]
GAX96795.11.100e-3629.06nucleolar complex protein 4 [Pythium insidiosum][more]
XP_009519551.14.000e-3626.19hypothetical protein PHYSODRAFT_485830 [Phytophtho... [more]
POM67091.14.000e-3625.70Nucleolar complex protein 4 [Phytophthora palmivor... [more]
ETM49915.15.200e-3629.23hypothetical protein L914_05929 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003046NSK003046Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00570.1NO16G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556724gene_5933Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g12gene6402Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00570.1NO16G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00570 ID=NO16G00570|Name=NO16G00570|organism=Nannochloropsis oceanica|type=gene|length=2826bp
ACAGATATTCGAAGCAGGAACTTGCCACTACCATGAAGGGCAAGCGAGTC
AAGACAATCAGGGGCTCGGCCTCCAGCACCAGCGGCATCACTACCAGTGC
TAAGAGCAGCAGCACAAGTATCTTCGGGCGTATACGGGAGGTGGAGCGAG
GCGTGGTGGACGGCCAGGATTTGCATCACATGAATGGACTAATCGAGCTT
CTGGGGCATGTTCGCAGGCTATTTCCCGCAGAGCATGCTTCGGTGGCAGA
CGAAGAAGATGAGGAGGGGAAGAAATCCGAGGCCAAGGGGATGAAGGAGG
CCAAGGAGGGAAAGGAGGCAGCCATCCAATCGATGCATGCGTTGCGTCGT
ATTTTTCTTGCATTGGTCAAGCGCGGGGATGTATGTAAGCCCCTTACTAC
TACCATAGCGTCCGACGGCAAAAAGGATAAGACGAAAGACAATGAGGCAA
ATACCAGCAGCAGCAGCAGCAGTAGCAGTAGAGGCCGAAAGCGTGCCCGG
GATACCGACATCAGCAACAGCGACGGTAGAGACGGCGTACAGAAGGATGC
CTTGGACGAATTCAACCGGTGGATTTACGGACAGTATCAATCCTTCCTCT
CCCTCCTCCTCGACCTTATTGACCCCTCCTCGCCTGTCTCCCCCTGTCAA
TCCTTTTCCCCCTCTTCCTCTTTTCTTCGCACCCAAGCCGCCGCCCTGCG
CACCATCATGGAGTTGGTCAAAGTGGAAAGTGTAGTCCGTCGGAAGCCTT
TCCGCTGCTTCGGCAACGACCTCTTCTACCGCTTGATTGCCCGCCTGGTC
TGCTGCAGCAGCAAGGGTTCAGCGAATAAATCGAAGAAGGAGAGGCAAGC
GCAGGCACATGCACAGGCAGAATTGATGGAAGTTCTGCGAGTGGATTATA
TTCTTCCCTATTGCGACGTGCGCTACTGGCTTCTGAAGAGCCTGCGAGTC
TTGGCAGGGAAGGAGGGCGGGAGGGAGGACGGGAAGGACGGACAGGAGGC
GAGGACGGCGGCAATCCTTAAGATGCTGATGTTGGTGACGGTGGAAAAGA
ACGAGGCGGACATGGTTTCGTTTTGGGTGTCTTTTGCAGGCGAGGAGGGG
GATGGGGCCTTGGTACCCAAGGCGCAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGACGGCGAAGAGGAGGACGAGGAAGGTTTTGATTTTA
TGGGTGAAGGATTTGGTGATGACGATTGGGATGAGGGCAAGGACGAGGAA
GAGAAGGAGGGAGCAGCGGTGGCGACGGAGAGGGTCCCTCATGTTGCCCG
TCTGTCCGAGCACCGCAAGGTCTTAGAGGAAGCCTGGGTGGCCTCCCTCC
GCCTGCCCTCCTTCACTCCCTCCCTCTACCGCTCCACCATCCAATTCGTC
GCGCGGCACGTGCTGGAGAAGATGCCTCATCCCTTGCAGCTGGCTGACTT
TTTTACGGCCTCCTATGCACAGGGGGGCTTGACGGCGCTGTTGGCGTTGG
AGGGATTGTTCGTTTTGATGCAGGCACATAACCTCGAATATCCTCGCTTT
TACTCCTCTCTCTATCGGTTGCTCGCACCGGGTCCTCAGCTCCTCTACTC
CAGGCACCGTTCGCGGTTTTTCAAGCTTCTTCGTCTTTGCTTGGTGTCAC
CCGCCGTCCCGGCCCATATTGTCGCTGCCTTTCTCAAGCGCCTTTGTCGG
CTCGCCCTCCTCGCCCCCCCGCCTTCCATCATCTTCCTCCTCTCCCTTAT
CGTCCTTGTCCTGCGAGCACACCCGGCGTGCTCAGCCTTGATACAGCGTG
CGTTAACTCTTGACAAGGCCAGTGCCATGCATTTAGATACTTTCGACCCC
AACGCCCAAGATCCCGCCAACGCTTTCCACCAGCAGCGGGAGCAACAGGG
ACATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGACGAAGAACAAGAAACTTCAA
AATGAAGAAGTAGGGTCCGTATCCACGATTCAAACCTCCTTATGGGAAGT
TGCGGCCTTACAATGGCACTATCATCCGAGTGTGGCCATGCTAGCCAAGG
GGCTCGAGGTCTCTACCCCGGAAGATCCAAAGACACTTAACCACCTTGTG
ACCGACATGGACGAGTTGGCCTCCTACACATATGCCGACTTGTTCTTGCA
AGAGGGAAAACAACGGCGGAAGGTCAGGAAGGATCAGATGGGGGAAGGAG
GAAAGAGGGGCGGGGGAAGGAGGGGGGAAGGAAAGGAGGAGAGGGGGGAG
GGAGGGGTGGCCTTGGCGTTTGAGAAGATGGCGAGGCCGGATAAGCTGTT
CCAGCCGGGAGATGTGTTTGATGGGTTGTTTGCTCTTCCCGCAGTGGCGG
TATTGGAGTGAGGTGGTGAGGGGCTGATGGTGGAGAGGATGGACATTGGG
GAGGGGAAGAGAGAGGACAAAACCCATAAAAAACGACCAGGGAGACGAGC
TATTAGGATGGAACATCATTCAGACGGAAGAAAAAGGGAGCAACTACGTA
TACTATTAGTCTCAAAACGACTCGAGGCTCGAGTATATGTAGCGGGGTTG
TCACAAGCCTTTTTCCTTGTCATCTCCTTCACTCTTGTTATCTTTCTCTA
TTTTTTCTCATTTTATACCTCAAACGTATATCTATCTTTTCATAACCGCT
TCCCTTTCTTCCTTCTCTACTTGTTGTACTGGATGTGCCCTCTTCAGGAT
TATTGAGGGGGATAACTGATTTAATTACGTGAGCACACTGTAAGCTGGAG
GAGAATGTTGTCAGCCAGGATTTGCT
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protein sequence of NO16G00570.1

>NO16G00570.1-protein ID=NO16G00570.1-protein|Name=NO16G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=793bp
MKGKRVKTIRGSASSTSGITTSAKSSSTSIFGRIREVERGVVDGQDLHHM
NGLIELLGHVRRLFPAEHASVADEEDEEGKKSEAKGMKEAKEGKEAAIQS
MHALRRIFLALVKRGDVCKPLTTTIASDGKKDKTKDNEANTSSSSSSSSR
GRKRARDTDISNSDGRDGVQKDALDEFNRWIYGQYQSFLSLLLDLIDPSS
PVSPCQSFSPSSSFLRTQAAALRTIMELVKVESVVRRKPFRCFGNDLFYR
LIARLVCCSSKGSANKSKKERQAQAHAQAELMEVLRVDYILPYCDVRYWL
LKSLRVLAGKEGGREDGKDGQEARTAAILKMLMLVTVEKNEADMVSFWVS
FAGEEGDGALVPKAQGGREGGREGGREDGEEEDEEGFDFMGEGFGDDDWD
EGKDEEEKEGAAVATERVPHVARLSEHRKVLEEAWVASLRLPSFTPSLYR
STIQFVARHVLEKMPHPLQLADFFTASYAQGGLTALLALEGLFVLMQAHN
LEYPRFYSSLYRLLAPGPQLLYSRHRSRFFKLLRLCLVSPAVPAHIVAAF
LKRLCRLALLAPPPSIIFLLSLIVLVLRAHPACSALIQRALTLDKASAMH
LDTFDPNAQDPANAFHQQREQQGHQQQQQQQQQQQQQQQQQQQQQQQQQT
KNKKLQNEEVGSVSTIQTSLWEVAALQWHYHPSVAMLAKGLEVSTPEDPK
TLNHLVTDMDELASYTYADLFLQEGKQRRKVRKDQMGEGGKRGGGRRGEG
KEERGEGGVALAFEKMARPDKLFQPGDVFDGLFALPAVAVLE*
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Synonyms
Publications