Naga_100532g5, gene6306 (gene) Nannochloropsis gaditana

Overview
NameNaga_100532g5
Unique Namegene6306
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:724099..727667 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100532g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:724099..727667 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G02440NO17G02440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6527rna6527-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6528rna6528-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6527rna6527Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6528rna6528Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6527

>rna6527-protein ID=rna6527-protein|Name=rna6527|organism=Nannochloropsis gaditana|type=polypeptide|length=565bp
MSLKYDPATIVSRCRHTICPILKPIQFIMRLPLVSAGFFSLPVHACASFP
LCEGCRNTRFSLLRALSFQTFLIGTRLGKYRDATIGSMVSSVWLLALFLS
LALQNVLAQSRCQLNKDCAEEQFCLFPDGACEGRGTCQDVPSLCTMDYRP
VCGCDGTIYGNRCEALSASMSVRMAGECGAGEEDSSLLPPQDVDEAGVPG
RVSAKRREGAMGRGRTRRDLLSVEGWTLSKESVRLDTDAAAASGDLGEEG
RGTFSLPAGRPPTWAGEEDEEEAAEGGQRCGSRGLLSCPEGAWCEYVDGT
CGDGDRGGRCRPLRVACPRIYAPVCGCDGRTHANTCVAGAARVSVRHAGP
CERVDAWPPGRISPDLTEVTGQEEERPSALRPGGLPGLGGRRDGGAEGGQ
DGDVRACGGLEGLACPVGHACIYPPGTCGAADEMGICLPAPLVCALIYQP
VCGCDGHTYANDCHAHAASVSIVAQGPCSPPDQAPAAVAAATTPAVEEAP
FPPSLPSSPVTPATSVEEGRLGEMDGGVSSEAVGSWVGAVGRAVSQKWQG
RLGEGAVEEGRGRKR
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protein sequence of rna6528

>rna6528-protein ID=rna6528-protein|Name=rna6528|organism=Nannochloropsis gaditana|type=polypeptide|length=460bp
MHHKRKSAVAGRGGVSGLPLYLLRRALSCIDVQFTRDRCTMDYRPVCGCD
GTIYGNRCEALSASMSVRMAGECGAGEEDSSLLPPQDVDEAGVPGRVSAK
RREGAMGRGRTRRDLLSVEGWTLSKESVRLDTDAAAASGDLGEEGRGTFS
LPAGRPPTWAGEEDEEEAAEGGQRCGSRGLLSCPEGAWCEYVDGTCGDGD
RGGRCRPLRVACPRIYAPVCGCDGRTHANTCVAGAARVSVRHAGPCERVD
AWPPGRISPDLTEVTGQEEERPSALRPGGLPGLGGRRDGGAEGGQDGDVR
ACGGLEGLACPVGHACIYPPGTCGAADEMGICLPAPLVCALIYQPVCGCD
GHTYANDCHAHAASVSIVAQGPCSPPDQAPAAVAAATTPAVEEAPFPPSL
PSSPVTPATSVEEGRLGEMDGGVSSEAVGSWVGAVGRAVSQKWQGRLGEG
AVEEGRGRKR
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Synonyms
Publications