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Properties
Property Name | Value |
Product | kazal-type serine protease inhibitor domain protein |
Orig transcript id | gnl|cribi|Naga_100532g5.2622.mrna |
Orig protein id | gnl|cribi|Naga_100532g5.2622 |
Gbkey | mRNA |
Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002468.1 | supercontig | CM002468.1:724099..727667 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6527 ID=rna6527|Name=rna6527|organism=Nannochloropsis gaditana|type=mRNA|length=1626bp GAAGCCTAACGCATACACTCACATAAGCTTTGTGCTCTGCTTGTACGTTG TAAAAAAAGCCGTGGAAAGACGCAGGAGCTGTAAGGGACGTATCTATTCC TGAACCTTCCTGACCTTTCCGAATTTGTTCGAATATTTACTAATCTGGGC CCCAATAATCTTGCATCACAGCACTCTATCAACTCAAATGACGCGTCAAC TTTCCATGGTATGCGCCATGGTGTTCGCCTACCTTTGCCTTTCTTCAGGT CAACATGTCAAGAGCTCCTCCCAAGTTCCTGTCAGTAGTGCTGTTGAAGG GATTGAAGGGGCCGGGGGCGTCTCTTGGAAAACTGTCACAGGGAAAATCG ATGATAAGGGCACCACTACAATCGAAGTGGAGGTCACGAACAAGAATAAC ATGGCGATGGAAGCACTCACGGCCCCCGCAAACGGAAAGTATGACGAGGA GGTGATGTACACTGCAACCGACAAGGTGGGGGCTGCGGCAGGGCTTGTGA ACCGTCCCAACCGCGGCACGGGCGATAGGGCTGTCGAGGTGGAGGAGGGA GACAAGGTGGGGGCTGCGGCAGGGCTTGTGAACCGTCCCAACCGCGGCAC GGGCAACAGGGCTGTCGAGGTGGAGGAGGGAGACAAGGTGGGGGCTGCGG CAGGGCTTGTGAACCGTCCCAACCGCGGCACGGGCGGTAGGGCTGTCGAG GTGGAAGAGAAGGCGGCAGAGCAAGAGACTGGGGGGGCTCGTCGATTGCG TGGGGCTTAGGATGCGTTGTGTTCCGTAACGGACGGCTTCGCATTTCATT ATGATGCAAATGGACAAAGTCGCAAAGCTTCAAGTCAACACGAATTGGGG ATGTGAGCGACAAATACATGTAAAATATGCAGTGTAAACAATAAAATTTT CATCTTTGTGCGATGTACCTATACATACTCAAACAACGGTGACGCACGCA TGCAATAAAGCAATGGAGAAAATCGTGGCTCAATACGCAGGCCTGTCTGA TTCTTAGGATACTTTTTAGATCAAGATATGGCACCAATCGAATAAGGACA AGTTGTGAGGAATGAAAAGGAGAATCGAAGTTAGCAGTGGCGAGACCAGA ACAATTATGGGCGCAGAAAATTCACGAGAAAATACCGCGCACGTTGTTGT TTTCCATCGCTTGTTTTCCGGTGGATCTGAAGGGGGGGACTTTAAGATGG ATTGTCATGTACACAGAAGCAGCCAGGGAGTCAAGCGGATCTCCAAAAAC CACGATTTCTACCTCCAATCCACGATTACGTCCTCGATGCAGGATAATAT TTATTTCATTCAAGAATCTTTTTACAAGAATGTGGACAAAATAAGACTCG AAAACAAAAGGGGACTCTCGATCAAAAGTTTCCAAAGCGCCGGATGAATT CCCAGTAGGCGAGGAGGGATTGTATCATCAGCGTCAACACCGTGCCCGCC TTCTGCTTGTTGGTCCGGCAACACGTTTCCGGTATTGAGCTGCTTGCTTT ACACACATTTCAACTTCTGTCACCATCATGCCCCGGGAATATGTTTCAAG GAAGGCTCTCACCGCCAAGAAACCATGAGGAACTTCAAAGATAACGAAGA AAAGAATGTTGATGTACGTTTCAGCA back to topprotein sequence of rna6527 >rna6527-protein ID=rna6527-protein|Name=rna6527|organism=Nannochloropsis gaditana|type=polypeptide|length=565bp MSLKYDPATIVSRCRHTICPILKPIQFIMRLPLVSAGFFSLPVHACASFP LCEGCRNTRFSLLRALSFQTFLIGTRLGKYRDATIGSMVSSVWLLALFLS LALQNVLAQSRCQLNKDCAEEQFCLFPDGACEGRGTCQDVPSLCTMDYRP VCGCDGTIYGNRCEALSASMSVRMAGECGAGEEDSSLLPPQDVDEAGVPG RVSAKRREGAMGRGRTRRDLLSVEGWTLSKESVRLDTDAAAASGDLGEEG RGTFSLPAGRPPTWAGEEDEEEAAEGGQRCGSRGLLSCPEGAWCEYVDGT CGDGDRGGRCRPLRVACPRIYAPVCGCDGRTHANTCVAGAARVSVRHAGP CERVDAWPPGRISPDLTEVTGQEEERPSALRPGGLPGLGGRRDGGAEGGQ DGDVRACGGLEGLACPVGHACIYPPGTCGAADEMGICLPAPLVCALIYQP VCGCDGHTYANDCHAHAASVSIVAQGPCSPPDQAPAAVAAATTPAVEEAP FPPSLPSSPVTPATSVEEGRLGEMDGGVSSEAVGSWVGAVGRAVSQKWQG RLGEGAVEEGRGRKR back to topmRNA from alignment at CM002468.1:724099..727667+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6527 ID=rna6527|Name=rna6527|organism=Nannochloropsis gaditana|type=mRNA|length=3569bp|location=Sequence derived from alignment at CM002468.1:724099..727667+ (Nannochloropsis gaditana) tgggggggaaaaagagtcAAAGTAATGGCCGGTCACGTGCCCATTTTCTC
CAACAAATGCACGTGTCTTTGACACTGTGCCGCGTCCTTTTGTTTCTGTG
TCGTAGGCTGTGGGTGTCATTTGGACGGATGAAAGGAAAATGatcaggga
agggggagactGTTCATCCCAAAACTCCTAGCAAAAAGGGACTTCAACAA
GTCACCACATGTCCCTCAAGTACGACCCTGCAACCATCGTCTCGCGCTGC
CGCCATACTATTTGTCCTATCTTAAAGCCCATTCAATTCATAATGCGGCT
GCCATTGGTCAGCGCgggctttttttccctaccTGTGCACGCTTgtgcgt
ccttccccctttgtGAGGGCTGCCGCAACACGAGGTTTTCGCTCTTACGC
GCACTCTCTTTTCAAACTTTCTTAATCGGCACGAGACTAGGGAAGTACAG
AGACGCTACGATAGGCAGTATGGTCTCTTCGGTGTGGCTGTTGGCTCTTT
TTTTGTCCTTAGCCCTGCAAAATGTCCTAGCACAGTCGAGGTAAGTGAGA
CGAAGGGATTATGTCTAGTACGGGCAGTTCCCCCTCCAGACATGAAGAGA
TAGAGGCTCAAGTCATACTTCTGTCTTACCGTTAAATGTGCTTGGTAGCC
TATTCCATGGAAGTGAGCCCAcggactcctccctcttcccgtcgcGCGCC
TGGAGGGCACAAGTTTGTTCGCTCGCTCAAGAAGTGACTCGCACTCCCCC
CCAATCCTTTGTCCATCCTTGCCTGTGGCTCTTCCAGGTGTCAGCTAAAC
AAGGACTGTGCGGAGGAGCAATTTTGTCTCTTCCCGGATGGGGCGTGTGA
GGGTAGAGGCACCTGTCAGGATGTCCCGTCTTTGTaagtaaggagggagg
gagggagggaaggagggagggagagaaggtgggagggaagaaaggaggga
aaagatgagaTGCACCATAAGCGAAAAAGTGCTGTAgccggacggggggg
cgTGTCGGGGCTGCCTCTTTATCTGTTGAGGCGCGCGTTGTCATGCATTG
ACGTGCAATTTACGCGGGACAGGTGTACGATGGACTACCGCCCTGTATGC
GGCTGCGACGGGACAATCTACGGCAATCGCTGCGAAGCCCTCAGTGCCAG
CATGTCGGTACGGATGGCAGGGGAATGCggcgccggggaggaggattcct
ccctccttcccccccaagaTGTGGACGAGGCAGGCGTGCCAGGGCGTGTC
TCagccaagaggagggaaggggcaatgggaaggggaaggacgcggcGAGA
TTTGCTCTCGGTGGAAGGCTGGACGTTGTCTAAGGAGAGCGTGCGTTTGG
ACACGGACGCCGCGGCGGCAAGCGGGGACcttggggaagaagggaggggc
actttctccctcccagcggGCCGCCCTCCgacgtgggcgggggaggaaga
cgaggaggaagcggcggagggaggacagcggTGTGGGTCCCGAGGCCTGC
TGTCGTGTCCGGAAGGGGCATGGTGCGAGTACGTCGACGGTACCTGCGGA
GATGGGGACCGGGGCGGGCGGTGTCGCCCCCTGCGGGTGGCCTGTCCTCG
GATCTATGCGCCCGTGTGTGGATGTGACGGGCGGACGCATGCCAATACGT
GcgtggcgggggcggcgcgggTGAGTGTCCGGCATGCGGGTCCCTGCGAG
CGCGTCGACGCCTGGCCTCCGGGTAGGATATCGCCGGATTTGACCGAGGT
GAcgggtcaagaggaggagagaccgTCGGCGTTGCGGCCGGGAGGGTTGC
CAGGgctggggggaaggcgggacggaggtgccgaaggagggcaggatggT
GATGTGCGGGCGTGCGGTGGCCTTGAAGGGTTGGCTTGCCCCGTCGGTCA
TGCCTGTATTTATCCTCCCGGAACCTGCGGAGCGGCGGACGAGATGGGTA
TCTGTCTCCCAGCACCCCTAGTCTGCGCCTTGATTTACCAGCCCGTGTGC
GGGTGCGACGGCCACACCTACGCCAATGACTGCCACGCCCACGCTGCCTC
TGTCTCCATTGTCGCCCAAGGTCCTTGCTCGCCCCCCGACCAGGCGCCGG
CGGCGGTAGCCGCAGCCACGACGCCTGCCGTGGAAGAAgctccgttccct
ccctccctccccagctccCCGGTGACGCCTGCAACCAGCGTGGAAGAGGG
TCGCCTGGGGGAaatggatggaggggtaTCATCGGAGGCTGTGGGCAGTT
GGGtaggggcggtggggagggcggtgtcTCAAAAGTGGCAAGGAAGGTTG
GGGGAAGGTGCAgttgaggaaggaaggggaaggaagaggtgatGCAATGA
ACAGACGATGCTTGAGAGCCGGTACTGTTCgtcgaaaggaagaggggcgt
ggaaggcagggcgggcgtgCGGAATTGGGGTGACGGGATGTTGGTTGAAC
AAATAGGAGGgacaaaaaaggaggagaggcgccCCTGCTGAATTTGAAAG
GGCAGTGAACCCGCAATTGGAAGCATGAAGCGGGCATTCAAGTGACGTTA
CACGCCGTGCTTCTGAGTAAGGCACGGAGCGGGGCCGGGCATGTATAAAT
GTGGAGGTTTGATAGGGTTTTTATATCCTcgcggaaggagagaggtctCT
CGTGACCATTCTGGCAAAGGAAACCTCAGCTATCCCGACAATCGACGCTG
AAATTTGTCAAGCCCTTCGCAGGGTAATATTTTGTTCTTTTGGAGCACGT
TTCGGACCACGTTTCCATCGGTAGGGGGCGTCCTGGACACTTTTATGTTC
TTCAAACTGAATGAGAGGGAGCACTTCAACAGGGGAGACAaccaggcggg
ggaggtttTTTCTGACACAGCTTAAATATCACGGGTCCTGGCCGTCAGCC
GCTTATATTAGAGATATGCATGCGATATATATCCAATATATAGCTAGATT
TTCATCTATGCTGCCGCAGAAGGCGCCATTTTGCATCCCAAGACCACTGA
AATGACACTTTATCCATGTTCAGCCCCCCCGgtcccgacctccctcgaca
tccttttcctttcattccccccccccttccctgcacTAATACTACGCATG
ACTCACGGTCAAACAGAAATAAGCCATGGAGACGCCAGAAGCACCACGGA
CCCCGCCGTTGTCCGTCAGGCCCCGTCCTCGGTGGGTGCACGATATAGAG
GCTGTTGTCTGTCAAGAATGCCGCGCGCCATTTAACCCTCTGACCCGTCG
AAGACACCACTGCCGTGTTTGTGGACGTGTTCTATGCCTAGCATGCACGC
GACAGCAACTCTTGATCCCGTCTTCTGAGCTGATCGCTCCTCGAAAGATG
CCAGCGGCCGCAATGCAACCCTTGAGTGTTGATCCTTACATCCCCCAAAG
AGCATGCCGGGCATGCGCAAGCCATCTAGCTCCTCTGCAGGCCACACTCC
AGCAATCCAGCAGCAAGGCCACGCAAAGGATTCACGTGGAGCGTCATTCC
TGGGCGCGGTATTTcaaccctcctttccaatcggcactggaggaggagat
ccgaAAAGCCACATACTCG back to topCoding sequence (CDS) from alignment at CM002468.1:724099..727667+ >rna6527 ID=rna6527|Name=rna6527|organism=Nannochloropsis gaditana|type=CDS|length=5094bp|location=Sequence derived from alignment at CM002468.1:724099..727667+ (Nannochloropsis gaditana) ATGTCCCTCAAGTACGACCCTGCAACCATCGTCTCGCGCTGCCGCCATAC TATTTGTCCTATCTTAAAGCCCATTCAATTCATAATGCGGCTGCCATTGG TCAGCGCgggctttttttccctaccTGTGCACGCTTgtgcgtccttcccc ctttgtGAGGGCTGCCGCAACACGAGGTTTTCGCTCTTACGCGCACTCTC TTTTCAAACTTTCTTAATCGGCACGAGACTAGGGAAGTACAGAGACGCTA CGATAGGCAGTATGGTCTCTTCGGTGTGGCTGTTGGCTCTTTTTTTGTCC TTAGCCCTGCAAAATGTCCTAGCACAGTCGAGGTGTCAGCTAAACAAGGA CTGTGCGGAGGAGCAATTTTGTCTCTTCCCGGATGGGGCGTGTGAGGGTA GAGGCACCTGTCAGGATGTCCCGTCTTTGTGTACGATGGACTACCGCCCT GTATGCGGCTGCGACGGGACAATCTACGGCAATCGCTGCGAAGCCCTCAG TGCCAGCATGTCGGTACGGATGGCAGGGGAATGCggcgccggggaggagg attcctccctccttcccccccaagaTGTGGACGAGGCAGGCGTGCCAGGG CGTGTCTCagccaagaggagggaaggggcaatgggaaggggaaggacgcg gcGAGATTTGCTCTCGGTGGAAGGCTGGACGTTGTCTAAGGAGAGCGTGC GTTTGGACACGGACGCCGCGGCGGCAAGCGGGGACcttggggaagaaggg aggggcactttctccctcccagcggGCCGCCCTCCgacgtgggcggggga ggaagacgaggaggaagcggcggagggaggacagcggTGTGGGTCCCGAG GCCTGCTGTCGTGTCCGGAAGGGGCATGGTGCGAGTACGTCGACGGTACC TGCGGAGATGGGGACCGGGGCGGGCGGTGTCGCCCCCTGCGGGTGGCCTG TCCTCGGATCTATGCGCCCGTGTGTGGATGTGACGGGCGGACGCATGCCA ATACGTGcgtggcgggggcggcgcgggTGAGTGTCCGGCATGCGGGTCCC TGCGAGCGCGTCGACGCCTGGCCTCCGGGTAGGATATCGCCGGATTTGAC CGAGGTGAcgggtcaagaggaggagagaccgTCGGCGTTGCGGCCGGGAG GGTTGCCAGGgctggggggaaggcgggacggaggtgccgaaggagggcag gatggTGATGTGCGGGCGTGCGGTGGCCTTGAAGGGTTGGCTTGCCCCGT CGGTCATGCCTGTATTTATCCTCCCGGAACCTGCGGAGCGGCGGACGAGA TGGGTATCTGTCTCCCAGCACCCCTAGTCTGCGCCTTGATTTACCAGCCC GTGTGCGGGTGCGACGGCCACACCTACGCCAATGACTGCCACGCCCACGC TGCCTCTGTCTCCATTGTCGCCCAAGGTCCTTGCTCGCCCCCCGACCAGG CGCCGGCGGCGGTAGCCGCAGCCACGACGCCTGCCGTGGAAGAAgctccg ttccctccctccctccccagctccCCGGTGACGCCTGCAACCAGCGTGGA AGAGGGTCGCCTGGGGGAaatggatggaggggtaTCATCGGAGGCTGTGG GCAGTTGGGtaggggcggtggggagggcggtgtcTCAAAAGTGGCAAGGA AGGTTGGGGGAAGGTGCAgttgaggaaggaaggggaaggaagaggtgaAT GTCCCTCAAGTACGACCCTGCAACCATCGTCTCGCGCTGCCGCCATACTA TTTGTCCTATCTTAAAGCCCATTCAATTCATAATGCGGCTGCCATTGGTC AGCGCgggctttttttccctaccTGTGCACGCTTgtgcgtccttccccct ttgtGAGGGCTGCCGCAACACGAGGTTTTCGCTCTTACGCGCACTCTCTT TTCAAACTTTCTTAATCGGCACGAGACTAGGGAAGTACAGAGACGCTACG ATAGGCAGTATGGTCTCTTCGGTGTGGCTGTTGGCTCTTTTTTTGTCCTT AGCCCTGCAAAATGTCCTAGCACAGTCGAGGTGTCAGCTAAACAAGGACT GTGCGGAGGAGCAATTTTGTCTCTTCCCGGATGGGGCGTGTGAGGGTAGA GGCACCTGTCAGGATGTCCCGTCTTTGTGTACGATGGACTACCGCCCTGT ATGCGGCTGCGACGGGACAATCTACGGCAATCGCTGCGAAGCCCTCAGTG CCAGCATGTCGGTACGGATGGCAGGGGAATGCggcgccggggaggaggat tcctccctccttcccccccaagaTGTGGACGAGGCAGGCGTGCCAGGGCG TGTCTCagccaagaggagggaaggggcaatgggaaggggaaggacgcggc GAGATTTGCTCTCGGTGGAAGGCTGGACGTTGTCTAAGGAGAGCGTGCGT TTGGACACGGACGCCGCGGCGGCAAGCGGGGACcttggggaagaagggag gggcactttctccctcccagcggGCCGCCCTCCgacgtgggcgggggagg aagacgaggaggaagcggcggagggaggacagcggTGTGGGTCCCGAGGC CTGCTGTCGTGTCCGGAAGGGGCATGGTGCGAGTACGTCGACGGTACCTG CGGAGATGGGGACCGGGGCGGGCGGTGTCGCCCCCTGCGGGTGGCCTGTC CTCGGATCTATGCGCCCGTGTGTGGATGTGACGGGCGGACGCATGCCAAT ACGTGcgtggcgggggcggcgcgggTGAGTGTCCGGCATGCGGGTCCCTG CGAGCGCGTCGACGCCTGGCCTCCGGGTAGGATATCGCCGGATTTGACCG AGGTGAcgggtcaagaggaggagagaccgTCGGCGTTGCGGCCGGGAGGG TTGCCAGGgctggggggaaggcgggacggaggtgccgaaggagggcagga tggTGATGTGCGGGCGTGCGGTGGCCTTGAAGGGTTGGCTTGCCCCGTCG GTCATGCCTGTATTTATCCTCCCGGAACCTGCGGAGCGGCGGACGAGATG GGTATCTGTCTCCCAGCACCCCTAGTCTGCGCCTTGATTTACCAGCCCGT GTGCGGGTGCGACGGCCACACCTACGCCAATGACTGCCACGCCCACGCTG CCTCTGTCTCCATTGTCGCCCAAGGTCCTTGCTCGCCCCCCGACCAGGCG CCGGCGGCGGTAGCCGCAGCCACGACGCCTGCCGTGGAAGAAgctccgtt ccctccctccctccccagctccCCGGTGACGCCTGCAACCAGCGTGGAAG AGGGTCGCCTGGGGGAaatggatggaggggtaTCATCGGAGGCTGTGGGC AGTTGGGtaggggcggtggggagggcggtgtcTCAAAAGTGGCAAGGAAG GTTGGGGGAAGGTGCAgttgaggaaggaaggggaaggaagaggtgaATGT CCCTCAAGTACGACCCTGCAACCATCGTCTCGCGCTGCCGCCATACTATT TGTCCTATCTTAAAGCCCATTCAATTCATAATGCGGCTGCCATTGGTCAG CGCgggctttttttccctaccTGTGCACGCTTgtgcgtccttcccccttt gtGAGGGCTGCCGCAACACGAGGTTTTCGCTCTTACGCGCACTCTCTTTT CAAACTTTCTTAATCGGCACGAGACTAGGGAAGTACAGAGACGCTACGAT AGGCAGTATGGTCTCTTCGGTGTGGCTGTTGGCTCTTTTTTTGTCCTTAG CCCTGCAAAATGTCCTAGCACAGTCGAGGTGTCAGCTAAACAAGGACTGT GCGGAGGAGCAATTTTGTCTCTTCCCGGATGGGGCGTGTGAGGGTAGAGG CACCTGTCAGGATGTCCCGTCTTTGTGTACGATGGACTACCGCCCTGTAT GCGGCTGCGACGGGACAATCTACGGCAATCGCTGCGAAGCCCTCAGTGCC AGCATGTCGGTACGGATGGCAGGGGAATGCggcgccggggaggaggattc ctccctccttcccccccaagaTGTGGACGAGGCAGGCGTGCCAGGGCGTG TCTCagccaagaggagggaaggggcaatgggaaggggaaggacgcggcGA GATTTGCTCTCGGTGGAAGGCTGGACGTTGTCTAAGGAGAGCGTGCGTTT GGACACGGACGCCGCGGCGGCAAGCGGGGACcttggggaagaagggaggg gcactttctccctcccagcggGCCGCCCTCCgacgtgggcgggggaggaa gacgaggaggaagcggcggagggaggacagcggTGTGGGTCCCGAGGCCT GCTGTCGTGTCCGGAAGGGGCATGGTGCGAGTACGTCGACGGTACCTGCG GAGATGGGGACCGGGGCGGGCGGTGTCGCCCCCTGCGGGTGGCCTGTCCT CGGATCTATGCGCCCGTGTGTGGATGTGACGGGCGGACGCATGCCAATAC GTGcgtggcgggggcggcgcgggTGAGTGTCCGGCATGCGGGTCCCTGCG AGCGCGTCGACGCCTGGCCTCCGGGTAGGATATCGCCGGATTTGACCGAG GTGAcgggtcaagaggaggagagaccgTCGGCGTTGCGGCCGGGAGGGTT GCCAGGgctggggggaaggcgggacggaggtgccgaaggagggcaggatg gTGATGTGCGGGCGTGCGGTGGCCTTGAAGGGTTGGCTTGCCCCGTCGGT CATGCCTGTATTTATCCTCCCGGAACCTGCGGAGCGGCGGACGAGATGGG TATCTGTCTCCCAGCACCCCTAGTCTGCGCCTTGATTTACCAGCCCGTGT GCGGGTGCGACGGCCACACCTACGCCAATGACTGCCACGCCCACGCTGCC TCTGTCTCCATTGTCGCCCAAGGTCCTTGCTCGCCCCCCGACCAGGCGCC GGCGGCGGTAGCCGCAGCCACGACGCCTGCCGTGGAAGAAgctccgttcc ctccctccctccccagctccCCGGTGACGCCTGCAACCAGCGTGGAAGAG GGTCGCCTGGGGGAaatggatggaggggtaTCATCGGAGGCTGTGGGCAG TTGGGtaggggcggtggggagggcggtgtcTCAAAAGTGGCAAGGAAGGT TGGGGGAAGGTGCAgttgaggaaggaaggggaaggaagaggtga back to top
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