Naga_100020g41, gene6220 (gene) Nannochloropsis gaditana

Overview
NameNaga_100020g41
Unique Namegene6220
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:512523..514365 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100020g41
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:512523..514365 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01620NO17G01620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6438rna6438-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6437rna6437-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6438rna6438Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6437rna6437Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6438

>rna6438-protein ID=rna6438-protein|Name=rna6438|organism=Nannochloropsis gaditana|type=polypeptide|length=145bp
MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPF
RNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTS
DMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD
back to top

protein sequence of rna6437

>rna6437-protein ID=rna6437-protein|Name=rna6437|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
MFYLKTLEKDFMLEPKDLGPGLKETIKRRLTQMMEGTLEPDLGFVIALVA
LDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFF
ADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVG
VDITPGRMNVVGSIMDDYTGLISGETD
back to top
Synonyms
Publications