ASNRS, gene6163 (gene) Nannochloropsis gaditana

Overview
NameASNRS
Unique Namegene6163
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:382977..385558 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100047g21
Gene biotypeprotein_coding
GeneASNRS
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:382977..385558 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL026ngnoL026Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G00870NO17G00870Nannochloropsis oceanica (N. oceanica IMET1)gene
NO24G00490NO24G00490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6379rna6379-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6379rna6379Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6379

>rna6379-protein ID=rna6379-protein|Name=rna6379|organism=Nannochloropsis gaditana|type=polypeptide|length=776bp
MQATSIRLRAPGVSYQTRKVVLAAALAGVELSVSLQEDPEILSSLVPHGK
SLVLEVQSASGSPFLIARSNVALRFLAENSPAAGLYGETLYEAGLVDQWL
DFSFNSLETPAAVMHLPPDAQVPLAVKETARREVEGAVRVLDEALEKSTF
LAGHKVTLADVGVFCALYDLVGVENAGSMSIALENFPGVLRWFLTLLHQP
CFQHVSPGEADKMKRLQAKLPSVGSTRRKLAEGPLAENGNRRPSKAGIAG
ARATQASAAKSGPAGGGRSSTKPPLLPKDGPDSSLFDRRRTVIKQLLVER
GEAAVGETVTIKGWVRTIRAGNKGALLFIELNDGSTALSMQAVLEADKTQ
GFAEATPASCGGVGASFSITGTLVRSPAEGQAVELHATVVEVLGKVYGGE
DGGVGGKLYPLSKKAHSMEYLRCNAHLRARTRVTGSVMRVRHAMAYATHK
FFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPEKGAPRLPIRPDGSID
YSQDFFGRRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAE
FWMIEPEIAFADLEMDMALAEDYLKYCVWYALRHNEEDLVLLEKVPGGEA
GLRERLRNVLENPFVRITYTEAVATLEKDLAAEKVAFQVKPEWGCDLGSE
HERYLTEQVYKRPVIVTNYPKDIKAFYMRLDEDGKTVSAMDILVPKIGEI
IGGSQREERLDVLKARCREMGLEEAALWWYLDLRRYGSHKHAGFGLGFER
LILFITGLENIRDVIPFPRFPAHAEF
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Synonyms
Publications