NO24G00490, NO24G00490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00490 vs. NCBI_GenBank
Match: EWM24295.1 (asparaginyl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 298.5 bits (763), Expect = 2.400e-77 Identity = 173/311 (55.63%), Postives = 205/311 (65.92%), Query Frame = 0 Query: 1 MSASTFRLRAPGESYQTRKVALAAALAGVELTTSLQEDPAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTVVVDRFPGVWRWFLTLLHQPLFQKVAAPNAAATIKAFEARLPKVGSSKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKDGPASSLFRRGRTVIKEILVEVG 312 M A++ RLRAPG SYQTRKV LAAALAGVEL+ SLQEDP L+ LVPHGKSL+LEV+S S SP +ARSN ALRFLAEN+PAAGLYGETLYEAGLVDQWLDFSFNSLE PA V+ LP AQ V AVKETARRE+ GAV VLD+AL +TFLAG K++LADV +FC+L+DL+ N G + ++ ++ FPGV RWFLTLLHQP FQ V +P A +K +A+LP VGS++ + KDGP SSLF R RTVIK++LVE G Sbjct: 1 MQATSIRLRAPGVSYQTRKVVLAAALAGVELSVSLQEDPEILSSLVPHGKSLVLEVQSASGSPFLIARSNVALRFLAENSPAAGLYGETLYEAGLVDQWLDFSFNSLETPAAVMHLPPDAQ--VPLAVKETARREVEGAVRVLDEALEKSTFLAGHKVTLADVGVFCALYDLVGVENAGSM-SIALENFPGVLRWFLTLLHQPCFQHV-SPGEADKMKRLQAKLPSVGSTR------RKLAEGPLAENGNRRPSKAGIAGARATQASAAKSGPAGGGRSSTKPPLLPKDGPDSSLFDRRRTVIKQLLVERG 301
BLAST of NO24G00490 vs. NCBI_GenBank
Match: CBJ25847.1 (Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus]) HSP 1 Score: 101.3 bits (251), Expect = 5.600e-18 Identity = 64/201 (31.84%), Postives = 103/201 (51.24%), Query Frame = 0 Query: 13 ESYQTRKVALAAALAGVELTTSLQEDPAALAQLVPHGKSLILEV-RSTSSSPL----FLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTV---VVDRFPGVWRWFLTLLHQPLF 206 + Y+ RK+ + A +AG++L + P K L+L+V R ++P+ + +SNA LR LA + LYG + +E+ DQWL+ + LEVPA L A S + AV A+R +L + + L T+TFL G++ ++ADV + C+ DL+ GG ++ + P V RW+ T+ H P F Sbjct: 28 QDYRVRKICVVARMAGIDLDLKTGMSEEEMEAFAPLAKGLVLKVCRPGQAAPVGGEEAVTQSNAILRTLAMAKADSSLYGRSEFESAQADQWLETCWKELEVPAQAL-----AAASGNQAVIAEAKRHLLSFLATANATLSTSTFLVGERTTIADVGLACAARDLIEGSVAGGAASLGARDLAGLPHVLRWYRTVTHHPAF 223
BLAST of NO24G00490 vs. NCBI_GenBank
Match: CBJ27519.1 (eukaryotic elongation factor-1 B gamma [Ectocarpus siliculosus]) HSP 1 Score: 91.3 bits (225), Expect = 5.800e-15 Identity = 67/201 (33.33%), Postives = 102/201 (50.75%), Query Frame = 0 Query: 14 SYQTRKVALAAALAGVELTT------SLQEDPAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTVVVDRFPGVWRWFLTLLHQPLFQKV 209 +++ KV +AA GVEL S + P LA+ P G+ +LE S + SNA R++A LYG + +E+ VD W+DF + +E+PAT+ P +DA A+ ++ A+G L+KAL T+L GDK++LAD+ + + LV + V FP V RWF T ++QP F+ V Sbjct: 11 NFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAK-SPLGRVPVLETPQGS-----IFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKIALGALEKALLHRTYLVGDKITLADITVASA----LVYPMKLVVSPEYRKAFPCVTRWFTTCVNQPQFKAV 201
BLAST of NO24G00490 vs. NCBI_GenBank
Match: XP_004341586.1 (elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] >ELR19500.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 89.4 bits (220), Expect = 2.200e-14 Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 0 Query: 59 TSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTVVVD-----RFPGVWRWFLTLLHQPLFQKV 209 T PLF SNA R+ A ++ +YG + YEA L+DQW+DFS N +E+PA+ P + E A+ +I A+ +L+K L T+L G+++SLAD+ + +L+ L T+V+D + V RWFLT ++QP F+ V Sbjct: 58 TPEGPLF--ESNAIARYAARYGGSSKIYGSSPYEASLIDQWIDFSANEIELPASAWLYPIFEIVPFNAEATERAKADIKKALELLNKHLTYRTYLVGERVSLADIVVSMALYRLY---------TMVLDITFRKNYGNVNRWFLTCVNQPQFRTV 201
BLAST of NO24G00490 vs. NCBI_GenBank
Match: EWM21126.1 (elongation factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 87.8 bits (216), Expect = 6.500e-14 Identity = 62/198 (31.31%), Postives = 105/198 (53.03%), Query Frame = 0 Query: 11 PGESYQTRKVALAAALAGVELTTSLQEDPAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTVVVDRFPGVWRWFLTLLHQPLFQKV 209 PG +++ K+ +AA GV++ + D AA + KS +V + L SNA R++A LYG + +++GLVD W+DF+ +E+PAT+ P + AV E A+ ++ A+ +LD L T+L G+K++LAD+ + + LV + + ++P V RWFLT+++QP F+ V Sbjct: 9 PG-NFRAFKILVAALYNGVDIDV-VDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASA----LVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAV 200
BLAST of NO24G00490 vs. NCBI_GenBank
Match: PFH37632.1 (putative elongation factor 1-gamma [Besnoitia besnoiti]) HSP 1 Score: 87.8 bits (216), Expect = 6.500e-14 Identity = 75/216 (34.72%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 7 RLRAPGESYQTRKVALAAALAGVELTT------SLQEDPAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGV-PTVVVDRFPGVWRWFLTLLHQPLFQKVAAPNAAA 216 +L P + + RKV L AA + L T +DPA LA+ P G+ +LE S + + L SNA R+LA GLYGETL E G VD WLDFS +EVP L QG V E A+ ++ A+ ++ L T TF+ G+ +++AD+ C + L G V ++ + P + RW+ TL++Q F+KV AA Sbjct: 5 KLLTPKDDVRGRKVQLVAAFLDLALQTPPFTVGKDDKDPAFLAK-SPLGRLPLLE--SELAGGVCLVESNAICRYLARLRADKGLYGETLAEQGEVDMWLDFSTLEVEVPMCCL-----VQGG---KVAERAQSDLTRALTAVNAHLKTRTFMVGENITIADL---CLVTVLSYGFRSGKVDEQSILAKHPHLKRWYETLVNQKAFKKVFGEAKAA 206
BLAST of NO24G00490 vs. NCBI_GenBank
Match: CCA15330.1 (calciumdependent protein 1 putative [Albugo laibachii Nc14]) HSP 1 Score: 87.4 bits (215), Expect = 8.400e-14 Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 0 Query: 1 MSASTFRLRAPGESYQTRKVALAAALAGV-------ELTTSLQEDPAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTVVVDRFPGVWRWFLTLLHQPLFQKV 209 + AS +L + +Y+ K+ +AA GV ++TT ++ A P GK +LE + S L SNA R++A +GL G T +E+G VD W+DFS + LEVP + P + K A ++ A+ VL+ L T+L G++++LAD+ I LLV + + + V RWF TL++QP FQKV Sbjct: 11 LPASKMKLYSYPGNYRVFKILIAAEYNGVDIEVPEFDMTTIKSKEFLAKN---PLGKVPVLETENGS-----LFESNAIARYVARLRADSGLSGRTFFESGQVDSWMDFSAHELEVPLQMWLYPVFGYMKFNAGTKAKAMEDVKKALQVLENHLHLRTYLVGEQITLADIVI----ASLLVYPMKMLMDKEFRKPYSAVNRWFNTLVNQPEFQKV 213
BLAST of NO24G00490 vs. NCBI_GenBank
Match: XP_024579888.1 (elongation factor 1- [Plasmopara halstedii] >CEG43519.1 elongation factor 1- [Plasmopara halstedii]) HSP 1 Score: 86.7 bits (213), Expect = 1.400e-13 Identity = 60/171 (35.09%), Postives = 84/171 (49.12%), Query Frame = 0 Query: 40 AALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSL--HDLLVRGNEGGVPTVVVDRFPGVWRWFLTLLHQPLFQKV 209 +A P GK +LE T +F S A R++A P GLYG+T +E+G +D W+DFS LEVP V P G A A+ ++ + L+ L T+L G++++LAD+ + SL V E P FP V RWF TL++QP FQ V Sbjct: 8 SAFKSKTPIGKVPLLE---TEEGCIF--ESGAIARYIARLRPDLGLYGKTFFESGQIDGWIDFSAFELEVPLEVWVHPILGVGKFHAAASTKAKADVRKVLQTLENHLHLRTYLVGEQVTLADIVVASSLVYPFKFVLDKEFRKP------FPAVIRWFTTLVNQPEFQAV 167
BLAST of NO24G00490 vs. NCBI_GenBank
Match: XP_009519320.1 (hypothetical protein PHYSODRAFT_359164 [Phytophthora sojae] >EGZ24032.1 hypothetical protein PHYSODRAFT_359164 [Phytophthora sojae]) HSP 1 Score: 86.3 bits (212), Expect = 1.900e-13 Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 0 Query: 11 PGESYQTRKVALAAALAGVELTT---SLQED--PAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSL--HDLLVRGNEGGVPTVVVDRFPGVWRWFLTLLHQPLFQKV 209 PG +Y+ KV +AA G+ + + +D + P GK +LE + + + S A R++A P GLYG+T +E+G VD W+DFS LEVP V P G + A A+ ++ A+ L+ L T+L G++++LAD+ + +L V E P V+ RWF TL++QP FQ V Sbjct: 55 PG-NYRVFKVLIAAEYNGIHIELPKFDMAKDLKTKSFKAKTPVGKVPVLETKEGT-----IFESGAIARYIARLRPDTGLYGKTFFESGQVDSWIDFSAYELEVPLEVWVHPILGVGKFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQITLADIVVASALVYPFKFVLDKEFRKPYTAVN------RWFATLVNQPEFQAV 247
BLAST of NO24G00490 vs. NCBI_GenBank
Match: XP_004353907.1 (glutathione S-transferase domain-containing protein [Cavenderia fasciculata] >EGG14498.1 glutathione S-transferase domain-containing protein [Cavenderia fasciculata]) HSP 1 Score: 85.9 bits (211), Expect = 2.500e-13 Identity = 66/211 (31.28%), Postives = 97/211 (45.97%), Query Frame = 0 Query: 19 KVALAAALAGVELTT---SLQED--PAALAQLVPHGKSLILEVRSTSSSPLFLARSNAALRFLAENAPAAGLYGETLYEAGLVDQWLDFSFNSLEVPATVLRLPTAAQGSVSDAVKETARREILGAVGVLDKALGTATFLAGDKLSLADVAIFCSLHDLLVRGNEGGVPTVVVD-----RFPGVWRWFLTLLHQPLFQKVAAPNAAATIKA 220 K +AA GVE+ Q+D A ++ PHGK + V T +F SN+ R++A +YG YEA ++DQWLDF+ N +E A P + + A+ + + LD L T++FL G ++SLAD+ + CSL T+V D F V RWF T ++QP F+ V AT+ A Sbjct: 16 KALIAAKYVGVEIEVPAFDFQKDSKSAEFLKVAPHGK---VPVMVTEKGSIF--ESNSIARYVAR--LGGKIYGSDAYEASVIDQWLDFATNEVEASAVAWLYPIMGFVKFNPEATQKAKENVKRLLTTLDNHLKTSSFLVGPRVSLADIVVACSLSTFY---------TMVFDPSFRSPFVNVNRWFTTCINQPNFKSVMGEVKFATVMA 210 The following BLAST results are available for this feature:
BLAST of NO24G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00490 ID=NO24G00490|Name=NO24G00490|organism=Nannochloropsis oceanica|type=gene|length=942bpback to top protein sequence of NO24G00490.1 >NO24G00490.1-protein ID=NO24G00490.1-protein|Name=NO24G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bpback to top Synonyms
Publications
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