NO17G00870, NO17G00870 (gene) Nannochloropsis oceanica

Overview
NameNO17G00870
Unique NameNO17G00870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2295
Alignment locationchr17:285081..287375 +

Link to JBrowse

Properties
Property NameValue
DescriptionElongation factor 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:285081..287375 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003746translation elongation factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: INTERPRO
TermDefinition
IPR036433EF1B_G_C_sf
IPR036282Glutathione-S-Trfase_C_sf
IPR036249Thioredoxin-like_sf
IPR010987Glutathione-S-Trfase_C-like
IPR004046GST_C
IPR004045Glutathione_S-Trfase_N
IPR001662Transl_elong_EF1_G_con
Homology
BLAST of NO17G00870 vs. NCBI_GenBank
Match: EWM21126.1 (elongation factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 716.8 bits (1849), Expect = 4.000e-203
Identity = 395/436 (90.60%), Postives = 411/436 (94.27%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAKKSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            MALKLYTNPGNFRAFKILVAALYNGVDI+VVDLDLAAKK +D+LAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVD+WIDFAA EVELPATLWVYPVFGYLPHNAAVTEKAKADLGAA+E LD HLADKTYLVG+KVTLADITVASALVYPYKIVMSPEYR+QYPHVLRWFLTIVNQP F+ V GDVVLA KEL+PSGAPPALA+PAKGA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EHPLKI+DR++PSEFVMDTWKKTYSNARSYD AMDEFWKVFDS GYSLWFC YQYNSEL KLFMTCNLVSGFVQRTDELRKWAFGCMWI GEDAPGK  + G WLMRGQSD YIK+ANPDAEFYTWTKV TPVSD DKKKVQEYWCSD+SLAGLPVLDCKVFK
Sbjct:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGA-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: CBJ27519.1 (eukaryotic elongation factor-1 B gamma [Ectocarpus siliculosus])

HSP 1 Score: 478.0 bits (1229), Expect = 3.100e-131
Identity = 273/438 (62.33%), Postives = 326/438 (74.43%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAA-KKSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQ-VVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            MALKL+TNP NFRAFK+L+AA YNGV++EV + +  +  KS D LAKSP G+VPVLETPQG +FESNAIARY+AR RRDT+LYGVSFF+S  VDSWIDF AHE+ELPAT+W YPV GY+P+N A   KAK DL  AL  L+  L  +TYLVGDK+TLADITVASALVYP K+V+SPEYR  +P V RWF T VNQPQFK V G V LA +E+   GA               XXXXXXXXXXXXXXXXXXXXXXXXXXXX             + HPL +MD++A S FV DTWKK YSN  SY+ +M +FW++FD+ G+SLW C Y+YN+E  +LFMT NLV GF+QR+ E+RKWAFGCM ITGE+  GK+ +VSG WL+RGQS + + +AN DA +Y W KVATPVSDADK  V E WCS+ ++ G PVLD KVFK
Sbjct:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKIALGALEKALLHRTYLVGDKITLADITVASALVYPMKLVVSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGA---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRDLGMPAEEKKAPHPLAVMDKEAKSPFVGDTWKKIYSN-NSYEESMKQFWEIFDAEGWSLWICRYKYNAENTRLFMTSNLVGGFIQRSGEIRKWAFGCMQITGEE--GKELIVSGAWLIRGQSIQPMVDANDDANWYDWVKVATPVSDADKALVTEMWCSETTVEGRPVLDGKVFK 420          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: XP_009041108.1 (hypothetical protein AURANDRAFT_39051 [Aureococcus anophagefferens] >EGB04257.1 hypothetical protein AURANDRAFT_39051 [Aureococcus anophagefferens])

HSP 1 Score: 411.8 bits (1057), Expect = 2.700e-111
Identity = 213/439 (48.52%), Postives = 274/439 (62.41%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDL-AAKKSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDES--LAGLPVLDCKVFK 437
            M L+LYT PGNFRAFK LVAA Y GVDI+V D D+    K+   LA SP GKVPVL+TPQG +FESNAIARY+AR R+D+++YG +F++S L+DSW+DF AHE+ELP T+WVYP+ GY+P NAA   KAK  +  AL++L+ HL DKTY+VGD +TLADIT+ SALVYP K+ M   +R+++P+V RWF   V+QPQF  V GDV LA  E++P+ A  A                                                      +HPLKI+D++ PSEFV D WKK YSN    D    +FW+++D  G+SLW C ++YN E +K FM  N + GFVQR+D +RKWAFG M++TG +      +SG WLMRGQS E++K+AN DA  YTWTK+    S      V EYW +D    L G  V D KVFK
Sbjct:    1 MTLQLYTYPGNFRAFKALVAAEYVGVDIDVPDFDMEKTAKTPSFLAMSPMGKVPVLKTPQGAIFESNAIARYVARLRKDSEIYGRTFYESALIDSWVDFCAHELELPCTMWVYPIIGYMPFNAAAFAKAKEHVSDALDSLERHLVDKTYIVGDAITLADITLVSALVYPAKLAMDKLFRARFPNVFRWFDLCVHQPQFVAVIGDVALAESEMLPASASNA--------------------------SRDKKEKLPKKEKAKVEQPTEPKPEKKKDHPLKILDKEEPSEFVGDVWKKVYSN-NPPDVWKKQFWEMYDPKGWSLWACRFKYNHENEKQFMCANAIGGFVQRSDAVRKWAFGAMFVTGSEQDLPIEISGVWLMRGQSVEHLKDANDDALCYTWTKI-DHTSQEMMDFVAEYWAADVDGYLEGKLVTDGKVFK 411          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: CCI44608.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 410.2 bits (1053), Expect = 7.900e-111
Identity = 205/434 (47.24%), Postives = 271/434 (62.44%), Query Frame = 0
Query:    3 LKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAKKSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            +KLYT PGN+R FKIL+AA YNG+DIEV + D+   KS + LAK+P GKVPVLET  G LFESNAIARY+AR R DT LYG +FF+SG VDSWIDF+AHE+E+P  +W+YP+FGY+  NA    KA  D+  AL+ L+ HL  +TYLVG+ +TLADI +AS LVYP K+++  + R  Y  V RWF T+VNQP+F+N+ GDV        P    P LA    G K                                             EHPL +++R+ PS+ V+D WK  YSN +    +M  FW  FDS GYS+W C+Y YN E + LFMT N ++GF+QR++ +RK+AFG M I G++   K  ++GCWL RG + +++  ANPDAE+YTW +VAT   DA K ++  YWC+D  L G P+ D +VFK
Sbjct:    1 MKLYTYPGNYRVFKILIAAEYNGIDIEVPEFDMTTIKSKEFLAKNPLGKVPVLETENGALFESNAIARYVARLRADTGLYGQTFFESGQVDSWIDFSAHELEVPLQMWLYPIFGYMKFNAGTKAKAVEDVKKALQVLENHLHLRTYLVGEHITLADIVIASLLVYPMKMLLDKDLRKPYSAVNRWFSTLVNQPEFQNIVGDV--------PLCDVPVLAEGDNGGKKETKKTAGKAPKATKQSVAEEPKPKKKV-----------------EHPLVVLNREKPSKMVLDEWKVQYSNTKPVIDSMKWFWDNFDSEGYSIWMCDYNYNDENKVLFMTSNAINGFIQRSEGVRKFAFGVMHICGKEG-SKLNITGCWLFRGDTIDHMMEANPDAEYYTWKRVAT-FDDASKARIAAYWCNDNELEGEPLADSRVFK 407          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: CCA15330.1 (calciumdependent protein 1 putative [Albugo laibachii Nc14])

HSP 1 Score: 408.7 bits (1049), Expect = 2.300e-110
Identity = 206/434 (47.47%), Postives = 270/434 (62.21%), Query Frame = 0
Query:    3 LKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAKKSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            +KLY+ PGN+R FKIL+AA YNGVDIEV + D+   KS + LAK+P GKVPVLET  G LFESNAIARY+AR R D+ L G +FF+SG VDSW+DF+AHE+E+P  +W+YPVFGY+  NA    KA  D+  AL+ L+ HL  +TYLVG+++TLADI +AS LVYP K++M  E+R  Y  V RWF T+VNQP+F+ V GDV L    ++  G         K A                                              EHPL +++R+ PS+ V+D WK  YSN +    +M  FW  FDS GYS+W C+Y YN E + LFMT N V+GF+QR++ +RK+AFG M I GE+   K  ++GCWL RG + E+I  ANPDAE+YTW +V T   DA K ++  YWC+D  L G P+ D +VFK
Sbjct:   16 MKLYSYPGNYRVFKILIAAEYNGVDIEVPEFDMTTIKSKEFLAKNPLGKVPVLETENGSLFESNAIARYVARLRADSGLSGRTFFESGQVDSWMDFSAHELEVPLQMWLYPVFGYMKFNAGTKAKAMEDVKKALQVLENHLHLRTYLVGEQITLADIVIASLLVYPMKMLMDKEFRKPYSAVNRWFNTLVNQPEFQKVIGDVPLCDVPVLAEGDNGGKKETKKNAPKATNAPKETVEEAPKPKKKV-------------------------EHPLVVLNREKPSKMVLDEWKVQYSNTKPVSDSMKWFWDNFDSEGYSIWMCDYNYNEENKVLFMTSNAVNGFIQRSEGVRKFAFGVMHICGEEG-SKLDITGCWLFRGDTVEHIMEANPDAEYYTWKRVTT-FDDASKARIAAYWCNDAELEGRPLADSRVFK 422          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: ETK89994.1 (hypothetical protein L915_06152 [Phytophthora parasitica] >ETL43394.1 hypothetical protein L916_06088 [Phytophthora parasitica])

HSP 1 Score: 406.8 bits (1044), Expect = 8.700e-110
Identity = 222/435 (51.03%), Postives = 289/435 (66.44%), Query Frame = 0
Query:    3 LKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAK-KSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            +KLYT PGN+R FK+L+AA YNGVDIE+ + D A   KS +  AK+P GKVP+LET +G LFES AIARY+AR R DT LYG +FF+SG VD+WIDF+A+E+E+P  +WV+P+ G    NAA   KAKAD+  AL+TL+ HL  +TYLVG++VTLADI VASALVYP+K V+  E+R  Y  V RWF T+VNQP+F+ V GDV L    L   G         K A XXXXXXXXXXXXXXXX                             EHPL +++R+ PS   +D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YNSE  K+FMTCN V GF+QR++ +RK+AFG M + G +   + +++GCWL RG S++++  ANPDAE+YTW K    ++D  K +V  YWC+++ L G P+ D KVFK
Sbjct:    1 MKLYTYPGNYRVFKVLIAAEYNGVDIELPEFDFAKDIKSKEFKAKTPIGKVPILETEEGTLFESGAIARYVARLRPDTGLYGKTFFESGQVDAWIDFSAYELEVPLEVWVHPILGVGKFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQVTLADIVVASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEGDNSGKKAAKKDAPXXXXXXXXXXXXXXXXV----------------------------EHPLAVLNREKPSSLNLDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 404          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: XP_009040775.1 (hypothetical protein AURANDRAFT_70385 [Aureococcus anophagefferens] >EGB04522.1 hypothetical protein AURANDRAFT_70385 [Aureococcus anophagefferens])

HSP 1 Score: 406.0 bits (1042), Expect = 1.500e-109
Identity = 211/439 (48.06%), Postives = 271/439 (61.73%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDL-AAKKSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDES--LAGLPVLDCKVFK 437
            M L+LYT PGNFRAFK LVAA Y GVDI+V D D+    K+   LA SP GKVPVL+TPQG +FESNAIARY+AR R+D+++YG +F++S L+DSW+DF AHE+ELP T+WVYP+ GY+P NAA + KAK  +  AL++L+ HL DKTY+VGD +TLADIT+ SALVYP K+ M   +R+++P+V RWF   V+QPQF  V GDV LA K+                 K                                             +HPLKI+D++ PSEFV D WKK YSN    D    +FW+++D  G+SLW C ++YN E +K FM  N + GFVQR+D +RKWAFG M++TG +      +SG WLMRGQS E++K+AN DA  YTWTK+    S      V EYW +D    L G  V D KVFK
Sbjct:    1 MTLQLYTYPGNFRAFKALVAAEYVGVDIDVPDFDMEKTAKTPSFLAMSPMGKVPVLKTPQGAIFESNAIARYVARLRKDSEIYGRTFYESALIDSWVDFCAHELELPCTMWVYPIIGYMPFNAAASAKAKEHVTDALDSLERHLVDKTYIVGDAITLADITLVSALVYPAKLAMDKLFRARFPNVFRWFDLCVHQPQFVAVIGDVALADKK----------------GKKDKSNKGSDANISVENASRDKKEKLPKKEKAKVEQLTEPKPEKKKDHPLKILDKEEPSEFVGDVWKKVYSN-NPPDVWKKQFWEMYDPKGWSLWVCRFKYNHENEKQFMCANAIGGFVQRSDAVRKWAFGAMFVTGSEQDLPIEISGVWLMRGQSVEHLKDANDDALCYTWTKI-DHTSQEMMDFVAEYWAADVDGYLEGKLVTDGKVFK 421          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: ETP19871.1 (hypothetical protein F441_06281 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 406.0 bits (1042), Expect = 1.500e-109
Identity = 222/434 (51.15%), Postives = 288/434 (66.36%), Query Frame = 0
Query:    4 KLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAK-KSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            KLYT PGN+R FK+L+AA YNGVDIE+ + D A   KS +  AK+P GKVP+LET +G LFES AIARY+AR R DT LYG +FF+SG VD+WIDF+A+E+E+P  +WV+P+ G    NAA   KAKAD+  AL+TL+ HL  +TYLVG++VTLADI VASALVYP+K V+  E+R  Y  V RWF T+VNQP+F+ V GDV L    L   G         K A XXXXXXXXXXXXXXXX                             EHPL +++R+ PS   +D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YNSE  K+FMTCN V GF+QR++ +RK+AFG M + G +   + +++GCWL RG S++++  ANPDAE+YTW K    ++D  K +V  YWC+++ L G P+ D KVFK
Sbjct:    5 KLYTYPGNYRVFKVLIAAEYNGVDIELPEFDFAKDIKSKEFKAKTPIGKVPILETEEGTLFESGAIARYVARLRPDTGLYGKTFFESGQVDAWIDFSAYELEVPLEVWVHPILGVGKFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQVTLADIVVASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEGDNSGKKAAKKDAPXXXXXXXXXXXXXXXXV----------------------------EHPLAVLNREKPSSLNLDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 407          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: XP_002901767.1 (elongation factor 1-gamma, putative [Phytophthora infestans T30-4] >EEY57157.1 elongation factor 1-gamma, putative [Phytophthora infestans T30-4])

HSP 1 Score: 406.0 bits (1042), Expect = 1.500e-109
Identity = 220/437 (50.34%), Postives = 291/437 (66.59%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAK-KSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            M LKLYT PGN+RAFK L+AA +NGVDIE+ + D A   K+ +  AK+PAGKVP+LET +G +FES AIA+Y+AR R DT LYG +FF+SG VD+WIDF+A+E+E+P   W+YP+ G+   NAA   KAKAD+  AL+TL+ HL  +TYLVG+++TLADI +ASALVYP+K V+  E+R  Y  V RWF T+VNQP+F+ V GDV L    L   G         K A XXXXXXXXXXXXXXXX                             EHPL +++R+ PS   +D WK  YSN R+   AM  FW+  D+ GYSLWFC+Y YN+E  K+FMTCN V GF+QR++ +RK+AFG M + G +   + +++GCWL RG S++++  ANPDAE+YTW K    ++D  K +V  YWC+++ L G P+ D KVFK
Sbjct:    1 MVLKLYTYPGNYRAFKALIAAEFNGVDIELPEFDFAKDVKTKEFKAKTPAGKVPLLETDEGCIFESGAIAKYVARLRADTGLYGKTFFESGQVDAWIDFSAYELEIPLEAWLYPILGWGQFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQITLADIFIASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEGDNSGKKAAKKDAPXXXXXXXXXXXXXXXXV----------------------------EHPLAVLNREKPSSLNLDAWKVQYSNTRNLADAMTWFWEHLDTEGYSLWFCDYNYNNENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 406          
BLAST of NO17G00870 vs. NCBI_GenBank
Match: XP_024581949.1 (elongation factor 1 [Plasmopara halstedii] >CEG45580.1 elongation factor 1 [Plasmopara halstedii])

HSP 1 Score: 405.6 bits (1041), Expect = 1.900e-109
Identity = 200/437 (45.77%), Postives = 277/437 (63.39%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAK-KSSDILAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAAHEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLVGDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNVTGDVVLAAKELMPSGAPPALAIPAKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEHPLKIMDRDAPSEFVMDTWKKTYSNARSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTDELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWTKVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK 437
            M LKLYT PGN+R FK L+AA +NG++IE+ + D A   KS +  AKSP GKVP+LET +G +FES AIA+Y+AR R DT LYG SFF+SG VD+WIDF+A+E+E+P  +W+YP+ G+   NAA   KAK+D+  AL+TL+ HL  +TYLVG+++TLADI +ASALVYP+K V+  ++R  YP + RWF T+VNQP+F+ V GDV L    L          +  K A                                              EHPL +++R+ PS  ++D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YN+E  K+FMTCN V GF+QR++ +RK+AFG M + G +   + +++GCWL RG S++++  ANPDAE+YTWTK    ++D  K +V  YWC+++ L G P+ D KVFK
Sbjct:    1 MVLKLYTYPGNYRVFKALIAAEFNGINIELPEFDFAKDIKSEEFKAKSPTGKVPLLETDEGCIFESGAIAKYVARLRADTGLYGKSFFESGQVDAWIDFSAYELEIPLEVWLYPILGWSKLNAAALTKAKSDVKKALQTLENHLHLRTYLVGEQITLADIFIASALVYPFKFVLDKDFRKPYPALNRWFSTLVNQPEFQAVVGDVPLIDVALTTEEDNSNTKVVKKEASQNEKASLKEEDVKPKKV----------------------------EHPLAVLNREKPSSMILDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNNENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWTK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 406          
The following BLAST results are available for this feature:
BLAST of NO17G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21126.14.000e-20390.60elongation factor 1 [Nannochloropsis gaditana][more]
CBJ27519.13.100e-13162.33eukaryotic elongation factor-1 B gamma [Ectocarpus... [more]
XP_009041108.12.700e-11148.52hypothetical protein AURANDRAFT_39051 [Aureococcus... [more]
CCI44608.17.900e-11147.24unnamed protein product [Albugo candida][more]
CCA15330.12.300e-11047.47calciumdependent protein 1 putative [Albugo laibac... [more]
ETK89994.18.700e-11051.03hypothetical protein L915_06152 [Phytophthora para... [more]
XP_009040775.11.500e-10948.06hypothetical protein AURANDRAFT_70385 [Aureococcus... [more]
ETP19871.11.500e-10951.15hypothetical protein F441_06281 [Phytophthora para... [more]
XP_002901767.11.500e-10950.34elongation factor 1-gamma, putative [Phytophthora ... [more]
XP_024581949.11.900e-10945.77elongation factor 1 [Plasmopara halstedii] >CEG455... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002889NSK002889Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00870.1NO17G00870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600069gene_7798Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g2gene9284Nannochloropsis gaditana (N. gaditana B-31)gene
ASNRSgene6163Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00870.1NO17G00870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00870 ID=NO17G00870|Name=NO17G00870|organism=Nannochloropsis oceanica|type=gene|length=2295bp
ACTAACTGCACCTAGAGACATGACAGTGTCACCCAACGGGAAGCTTACCC
AGGGATGGGCCATCATAAGGGCGATTCCTTGATGCCTCGCGCCGTCTCGC
TGACAAACTTGTCTCCGCCACACACAATGCAGTCTGGGTGGATCTGGCTG
GTTCCACGGAATCTCATGCCCTTGTTGTTCTCATTCCCTGCTTTTGGATG
CTTGGGACTGCAGGCAAGGTGCGTAATGCTGGATTCGTCGACCTCCTGAC
CCCTCACCAAACGAGTGGCTTGGAAGTCTTTCTCTTCTTCTTCGCCCTCG
TCTGATCATGCTGATGCACGCGGCACGCTCGCATACCCCAAAAAAGCGCT
GTTTGCCCTTCTCCCACATACCACACACCACCGTCCCGCAACACAGAGAC
GCGTCTTCTTTGCTCCGGCAACCGACAATCCCAATATCAGCACCACCATG
GCTCTGgtaagtacgaatggtctgggaaaggaatcaacgatggagggagg
acgtgcactgcacccctcgtcatttcattgagcgcaacgaacacagctag
tgttttcaaagcagtcccagtctcgctctatgtagacgggcgcaacaaca
gaatccgcgtgtcgtgctttgctcagaaacgccagcactcaccctccctc
cgtccacaaccctctcgtcctctcacagAAACTCTACACCAACCCCGGCA
ACTTTCGGGCCTTTAAAATCCTGGTTGCTGCCCTGTATAACGGCGTGGAT
ATTGAGGTTGTGGACCTTGATCTGGCGGCGAAGAAGAGCTCGGACATCCT
GGCCAAGTCTCCGGCGGGCAAGGTTCCCGTGCTCGAGACACCCCAGGGTC
TTCTGTTTGAGAGCAATGCCATCGCGCGCTACATTGCCCGTGCCCGCCGT
GATACCGACCTGTATGGTGTGTCGTTTTTTGATTCTGGCCTGGTAGATTC
CTGGATTGATTTTGCGGCGCACGAGGTCGAGCTCCCGGCGACGCTGTGGG
TGTACCCGGTGTTCGGGTACCTCCCTCACAACGCCGCCGTGACCGAGAAG
GCCAAAGCTGACTTGGGCGCAGCTTTGGAGACGCTCGATGCCCACTTGGC
GGACAAGACATATCTGGTGGGGGATAAAGTCACCCTGGCCGACATCACAG
TTGCCTCTGCGTTGGTCTACCCCTACAAGATCGTCATGAGCCCCGAGTAC
CGTTCTCAGTACCCGCACGTCCTCCGCTGGTTCCTCACCATCGTGAACCA
GCCTCAGTTCAAGAATGTGACCGGCGACGTCGTTCTGGCCGCGAAGGAGC
TGATGCCTTCTGGTGCTCCTCCCGCTCTTGCCATCCCCGCGAAGGGTGCC
AAGAAGGAGAAGAAGGACAAGGCCCCCAAGGCGGCTGCTCCCAAGCAAGA
GAAGAAGAAGGAGGCGGCGCCTCCAGCGGCAAAGTCCGGGGAGGACTTGG
AGGAACAGCTGGCAAAAGAATCGAAGAAGGCCGCCTCGGAGCACCCGCTA
AAGATAATGGATAGGGACGCGCCATCGGAGTTTGTGATGGACACATGGAA
GAAGACGTATTCCAATGCGCGTTCTTACGATGCGGCAATGGATGAGTTCT
GGAAGGTATTTGATAGCACGGGCTACTCGCTTTGGTTCTGTGAGTACCAG
TACAACAGTGAGCTCCAGAAGCTTTTCATGACGTGCAATCTCGTGAGCGG
CTTTGTCCAGCGAACGGACGAGTTGCGGAAGTGGGCTTTTGGGTGCATGT
GGATCACAGGGGAGGATGCACCAGGGAAACAGGTGGTGAGTGGGTGCTGG
TTGATGAGGGGACAGAGCGACGAGTACATCAAGAATGCCAACCCGGACGC
GGAATTCTACACGTGGACCAAAGTGGCCACGCCCGTGTCGGACGCAGACA
AGAAGAAGGTGCAGGAGTACTGGTGCAGTGATGAAAGCTTGGCAGGGCTC
CCCGTGTTGGATTGCAAGGTGTTCAAGTAAGCAACGTCAAAGTGCATGTC
CCAAGGGGGTTGGAAGGGAGGGAGGGAGGGAGAGGGTTGCAGAGGGTTGG
TTGTAGGGCGGAAAAGGAGATGGTGAACTCGGTGTTTTGGTGGTGGGAAG
AGAAGGGACAAGCATGCATGTTGATGCTGGCGTTTTTGGTATTTCTCATC
GTCGCCGTCTGTCGTCGGACATATCTCTCGAGGACAAGGAAGGGAAGAAA
GAATAAGACGGAATACGATTGGGCGTGAGTCTGGAAAGGGGATGCGGTTT
TACATGTTCTTTGTTAATTTTAGGATTGATTGCATTGTTTACTCA
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protein sequence of NO17G00870.1

>NO17G00870.1-protein ID=NO17G00870.1-protein|Name=NO17G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bp
MALKLYTNPGNFRAFKILVAALYNGVDIEVVDLDLAAKKSSDILAKSPAG
KVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDSWIDFAA
HEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAALETLDAHLADKTYLV
GDKVTLADITVASALVYPYKIVMSPEYRSQYPHVLRWFLTIVNQPQFKNV
TGDVVLAAKELMPSGAPPALAIPAKGAKKEKKDKAPKAAAPKQEKKKEAA
PPAAKSGEDLEEQLAKESKKAASEHPLKIMDRDAPSEFVMDTWKKTYSNA
RSYDAAMDEFWKVFDSTGYSLWFCEYQYNSELQKLFMTCNLVSGFVQRTD
ELRKWAFGCMWITGEDAPGKQVVSGCWLMRGQSDEYIKNANPDAEFYTWT
KVATPVSDADKKKVQEYWCSDESLAGLPVLDCKVFK*
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Synonyms
Publications