Naga_100105g10, gene6135 (gene) Nannochloropsis gaditana

Overview
NameNaga_100105g10
Unique Namegene6135
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:306896..309344 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100105g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:306896..309344 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01350NO24G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6348rna6348-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6348rna6348Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6348

>rna6348-protein ID=rna6348-protein|Name=rna6348|organism=Nannochloropsis gaditana|type=polypeptide|length=626bp
MQAHTYTTISINLRQENMKKITSFASPRRLGGKADEAAREEALSSTPNSE
SALDLTADIKEILIAGARTSQATKNSPRNGLDGQNNNISSSPRKIPAAFT
SLAPPLSPESPREKRGLLDFSALSSLSPGRKKVAGLGCIRNTTSPLRAGS
APAGAGFVSQPTSPISSSPSSPSYKFPLSSRSPARGSSGSLRLHSLRNLT
GTPPNTARSPKPADGLWGLLGYTSPLDSAVHEAARQGDLPLLQTLLTQNP
TLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTAL
HHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNL
QVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQE
AQQHARALTEGGALHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGD
GEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIA
SERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEY
LKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGH
KKALKIWLRLRAADREGSGRGEMKSP
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Synonyms
Publications