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Properties
| Property Name | Value |
|---|
| Product | ankyrin repeat domain protein |
| Orig transcript id | gnl|cribi|Naga_100105g10.10585.mrna |
| Orig protein id | gnl|cribi|Naga_100105g10.10585 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:306896..309344 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6348 ID=rna6348|Name=rna6348|organism=Nannochloropsis gaditana|type=mRNA|length=913bp
AGTTGGCGGCCACGGGCCCTCTCGTCCACACTTACCAAACCATGCAGGGT
AGAAGTAGAGCCATTCTTTTGCACGTGATCTACGGACCTTGATCATTCTT
GAAGTTCTTGTACCTCTGCAACAATATCACCCAGTCGTTCCGTGGGGGCT
GTCTTCTTCATTCGATGACGGTAGTCGTCTTCAGTAGCCCCACTAATCTG
GTCATTTTTCAATCCCGATCTCTTTCTGCTTCAACGTTTGGAATTAGACT
TGTGCTTGAAGCGTGCCAAGAAACAAGCTTGACATGAGTATCAGCACAAA
TCCCGTCGGGAAAGTATGGGTGGAGAACATGTTTCTGTGGCTTGCCCCGC
TCCTTCTCTTCATCTATAAGATGCTGTACGAATACCTTCCTGCTCCTGCC
TTCATCGCATGCCTCGTAATTCCCGCCTTATACGTCTACCGCGTAACAAA
GGAGCTCAGTCCCGTGGAAGCTGCTGATGAGATGAGCGCTAAGGAACGGA
TGGCGGAAGAGATGCTTGAGGAGCTCACGAAGGAGGAGGAGGTGAATGAG
AGTAAAAAGAAGAAAGATAAAAACGATGGGAAGCACAAGAAGAAGCTGCA
AGGAGGAGGGGGAAAGTCTGCAACGAGCGCGGGCGGAACATCGAAAGGAA
AGCGTCAATCTACCGGAGGAGATGAAGATGACGAGGATGACATGCTCACT
CGCATGGCCCAGCAACGGGCGAAGAAGGCAGTGAGATAATCGAGGCAACG
AGCCGTTGCGGATTCGCGAGGAATCTCCATGGATCTTACCGCGTCGTTTC
AAATCTCACGCTGGCGGGTAGCAAATCAACGATCTTTTTAAGTAGATTAA
ATCGAGCATGCAAGCATGCTCTGCTTGTGCAAGCGGGCTCTTCATTTGTC
AATATTTTTATCC back to topprotein sequence of rna6348 >rna6348-protein ID=rna6348-protein|Name=rna6348|organism=Nannochloropsis gaditana|type=polypeptide|length=626bp
MQAHTYTTISINLRQENMKKITSFASPRRLGGKADEAAREEALSSTPNSE
SALDLTADIKEILIAGARTSQATKNSPRNGLDGQNNNISSSPRKIPAAFT
SLAPPLSPESPREKRGLLDFSALSSLSPGRKKVAGLGCIRNTTSPLRAGS
APAGAGFVSQPTSPISSSPSSPSYKFPLSSRSPARGSSGSLRLHSLRNLT
GTPPNTARSPKPADGLWGLLGYTSPLDSAVHEAARQGDLPLLQTLLTQNP
TLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTAL
HHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNL
QVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQE
AQQHARALTEGGALHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGD
GEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIA
SERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEY
LKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGH
KKALKIWLRLRAADREGSGRGEMKSP back to topmRNA from alignment at CM002468.1:306896..309344+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6348 ID=rna6348|Name=rna6348|organism=Nannochloropsis gaditana|type=mRNA|length=2449bp|location=Sequence derived from alignment at CM002468.1:306896..309344+ (Nannochloropsis gaditana)
TGTGTTTTTATTCTTAGTGTACATGATAACACATGCAAGCTCACACATAC
ACGACCATATCGATCAATCTTAGACAGGAGAATATGAAAAAAATTACGTC
CTTTGCTTCTCCTCGACGActtggagggaaggcagacgaggcagcgaggg
aagaggctcTGTCTTCCACCCCTAACAGCGAGAGCGCCCTGGATCTGACG
GCTGATATCAAGGAGATCCTGATAGCCGGGGCTAGAACGAGTCAAGCCAC
GAAGAACAGCCCACGCAACGGACTTGACGGACAAAATAATAACATCAGCA
GTAGCCCCCGCAAGATCCCTGCGGCATTTACcagccttgcccctcccctt
tctccagaATCTCCCCGAGAGAAGCGGGGCCTACTCGACTTCTCCGCGCT
CAGTTCTCTGTCCCCCGGCCGCAAGAAAGTCGCTGGTCTTGGATGTATCC
GCAACACAACAAGTCCTTTGCGCGCGGGAAGTGCGCCTGCTGGAGCTGGT
TTTGTATCCCAGCCCACTTCccctatctcctcctctccaagctctccctc
ctacaAATTCCCTCTCAGCTCCCGGAGCCCTGCccgcggcagcagcggca
gtcTTAGGCTCCACAGTTTGCGGAACCTGACAGGCACGCCCCCCAATACT
GCGCGCTCGCCAAAACCCGCCGATGGACTTTGGGGCCTCTTGGGCTACAC
GTCACCCTTGGACAGCGCCGTGCACGAAGCCGCCCGGCAGGGAGACCTGC
CCCTTCTCCAAACGCTTCTCACCCAGAACCCTACCTTGGTTTCCACGCCC
GGCAATGATAACGCGACGCCGTTGatgctggcggcgggggctgggCAAGA
AGAAACAGTGCGATACTTACTGCGCGCGCTTTCTGGGCGGGCAGACGTGT
GGGCCACAGACGGTGCGAGGCGCACGGCCCTGCACCATCTCGCCAGGGGA
ACCTCGGATGCGCCCAGTGTGGCGCTTTGCTTGTTGGGGCTCGatcagga
aggggggaggccgcagcATTTGGAttgggaggacgtggagggccGGACTG
CAGTGCATTATGCCGCAAGCCGGGGGAACCTGCAAGTGCTTCGATTTTTG
TTGGGAAAAGGCGCCAATCCTTTGGCGGTGGATAAGGAAGGCTTAGATCc
tctccagctcctgctccaAGAAAAGTCCAGGAGCGTCTCAGTGCAGAGCA
AGGGGGGTGAGATTGAGCGATGCCTGCAGGAGGCGCAGCAGCATGCAAGG
GCCCTgaccgagggaggagcgCTGCACAGCCATGATAGCCAGGAAGtctc
caagaagaagggttCAGGCATCACGTGCGTGTGGGAGTGCATGGCGCGGC
TCtgtggggaggcggtggaggacgccggcgatggcgaagaggacgatatT
CCCCAACGTACGTGAGATTATGGCCAGAGGGCGGTGGCAGGGCAAATACG
TGTATGGCATTCACTTTAGTGGTTTCAAGCTGCACACGCAGGCATGGTCA
ATGGAAGCAGCTCTTGCTTTACGCACGCCCCATCTCACCCTCcgtacctt
cctcccttctaccCACAGCCGTTGAACATCAACTCCTCTGCGTTTTCCGC
GCATCCAGCATTCCTCCCGATGCAAGCGAGGTCTACTTGGATAACCTCCG
TCGCCATGGCTACGATAATCTCATGGCGCTGCGCGCTATCGCTTCCGAAC
GCTTCAAACTTAGCCTTGGCAAATACGTGCCTGATCGCCAGGATAGAAAG
CGGCTTATTAAGGCCTTGAATGCGATGATAGACACAGTGGACGAAAGTGG
TAAGATCCCTGAGCCACCACTTCATCTTCCTGTGGGCGAATACCTCAAAC
ACCTGTTGAGCGTCTCAGACGATCTCGCGATGCGTTACGCGGAGGGCTTG
CGGGGGATGAACGTCCACACGGGAGCTCAGTTAGGCACGGCGTCCTATGA
CGAGGTGGAAATGAATCTAGGATCTACCTTATTGCAGGGGCATAAGAAAG
CATTGAAAATTTGGCTACGTCTTCGCGCAGCcgatagggagggaagcgga
cgGGGAGAAATGAAGTCGCCCTGAATTATGCGTTAAAATTTTGTGGAAGG
ATTCAATGCGCAATGGCAAGTACAGCAATGTAAATGTAAAGCAACGGTGA
TTTCGATGGATTTTTTGTGGAAAAGATAAGATTTACTTCTAATTAAGGTA
TGCTTTTGGGGTCAAACAGTATGCCAagggggtcaggaggttaCAAACTA
AAAAGAAGGAGCGTACCGCAAGACCATCGTTCCGACATTAAAGTGCAGCG
TCATGAACAGAGCAAAAGAAAAATCATAGGTCATACAACGCTCGACATGA
GCAGTATTTTCAACATCCCACCGCGGTATGGTTGTCGTGGGGGCTGTCTA
CCAGGTAATACCAGCCTTCACTCTCGCTAACCGCCTTCGCTCCTTTACC back to topCoding sequence (CDS) from alignment at CM002468.1:306896..309344+ >rna6348 ID=rna6348|Name=rna6348|organism=Nannochloropsis gaditana|type=CDS|length=3762bp|location=Sequence derived from alignment at CM002468.1:306896..309344+ (Nannochloropsis gaditana)
ATGCAAGCTCACACATACACGACCATATCGATCAATCTTAGACAGGAGAA
TATGAAAAAAATTACGTCCTTTGCTTCTCCTCGACGActtggagggaagg
cagacgaggcagcgagggaagaggctcTGTCTTCCACCCCTAACAGCGAG
AGCGCCCTGGATCTGACGGCTGATATCAAGGAGATCCTGATAGCCGGGGC
TAGAACGAGTCAAGCCACGAAGAACAGCCCACGCAACGGACTTGACGGAC
AAAATAATAACATCAGCAGTAGCCCCCGCAAGATCCCTGCGGCATTTACc
agccttgcccctcccctttctccagaATCTCCCCGAGAGAAGCGGGGCCT
ACTCGACTTCTCCGCGCTCAGTTCTCTGTCCCCCGGCCGCAAGAAAGTCG
CTGGTCTTGGATGTATCCGCAACACAACAAGTCCTTTGCGCGCGGGAAGT
GCGCCTGCTGGAGCTGGTTTTGTATCCCAGCCCACTTCccctatctcctc
ctctccaagctctccctcctacaAATTCCCTCTCAGCTCCCGGAGCCCTG
CccgcggcagcagcggcagtcTTAGGCTCCACAGTTTGCGGAACCTGACA
GGCACGCCCCCCAATACTGCGCGCTCGCCAAAACCCGCCGATGGACTTTG
GGGCCTCTTGGGCTACACGTCACCCTTGGACAGCGCCGTGCACGAAGCCG
CCCGGCAGGGAGACCTGCCCCTTCTCCAAACGCTTCTCACCCAGAACCCT
ACCTTGGTTTCCACGCCCGGCAATGATAACGCGACGCCGTTGatgctggc
ggcgggggctgggCAAGAAGAAACAGTGCGATACTTACTGCGCGCGCTTT
CTGGGCGGGCAGACGTGTGGGCCACAGACGGTGCGAGGCGCACGGCCCTG
CACCATCTCGCCAGGGGAACCTCGGATGCGCCCAGTGTGGCGCTTTGCTT
GTTGGGGCTCGatcaggaaggggggaggccgcagcATTTGGAttgggagg
acgtggagggccGGACTGCAGTGCATTATGCCGCAAGCCGGGGGAACCTG
CAAGTGCTTCGATTTTTGTTGGGAAAAGGCGCCAATCCTTTGGCGGTGGA
TAAGGAAGGCTTAGATCctctccagctcctgctccaAGAAAAGTCCAGGA
GCGTCTCAGTGCAGAGCAAGGGGGGTGAGATTGAGCGATGCCTGCAGGAG
GCGCAGCAGCATGCAAGGGCCCTgaccgagggaggagcgCTGCACAGCCA
TGATAGCCAGGAAGtctccaagaagaagggttCAGGCATCACGTGCGTGT
GGGAGTGCATGGCGCGGCTCtgtggggaggcggtggaggacgccggcgat
ggcgaagaggacgatatTCCCCAACCCGTTGAACATCAACTCCTCTGCGT
TTTCCGCGCATCCAGCATTCCTCCCGATGCAAGCGAGGTCTACTTGGATA
ACCTCCGTCGCCATGGCTACGATAATCTCATGGCGCTGCGCGCTATCGCT
TCCGAACGCTTCAAACTTAGCCTTGGCAAATACGTGCCTGATCGCCAGGA
TAGAAAGCGGCTTATTAAGGCCTTGAATGCGATGATAGACACAGTGGACG
AAAGTGGTAAGATCCCTGAGCCACCACTTCATCTTCCTGTGGGCGAATAC
CTCAAACACCTGTTGAGCGTCTCAGACGATCTCGCGATGCGTTACGCGGA
GGGCTTGCGGGGGATGAACGTCCACACGGGAGCTCAGTTAGGCACGGCGT
CCTATGACGAGGTGGAAATGAATCTAGGATCTACCTTATTGCAGGGGCAT
AAGAAAGCATTGAAAATTTGGCTACGTCTTCGCGCAGCcgatagggaggg
aagcggacgGGGAGAAATGAAGTCGCCCTGAATGCAAGCTCACACATACA
CGACCATATCGATCAATCTTAGACAGGAGAATATGAAAAAAATTACGTCC
TTTGCTTCTCCTCGACGActtggagggaaggcagacgaggcagcgaggga
agaggctcTGTCTTCCACCCCTAACAGCGAGAGCGCCCTGGATCTGACGG
CTGATATCAAGGAGATCCTGATAGCCGGGGCTAGAACGAGTCAAGCCACG
AAGAACAGCCCACGCAACGGACTTGACGGACAAAATAATAACATCAGCAG
TAGCCCCCGCAAGATCCCTGCGGCATTTACcagccttgcccctccccttt
ctccagaATCTCCCCGAGAGAAGCGGGGCCTACTCGACTTCTCCGCGCTC
AGTTCTCTGTCCCCCGGCCGCAAGAAAGTCGCTGGTCTTGGATGTATCCG
CAACACAACAAGTCCTTTGCGCGCGGGAAGTGCGCCTGCTGGAGCTGGTT
TTGTATCCCAGCCCACTTCccctatctcctcctctccaagctctccctcc
tacaAATTCCCTCTCAGCTCCCGGAGCCCTGCccgcggcagcagcggcag
tcTTAGGCTCCACAGTTTGCGGAACCTGACAGGCACGCCCCCCAATACTG
CGCGCTCGCCAAAACCCGCCGATGGACTTTGGGGCCTCTTGGGCTACACG
TCACCCTTGGACAGCGCCGTGCACGAAGCCGCCCGGCAGGGAGACCTGCC
CCTTCTCCAAACGCTTCTCACCCAGAACCCTACCTTGGTTTCCACGCCCG
GCAATGATAACGCGACGCCGTTGatgctggcggcgggggctgggCAAGAA
GAAACAGTGCGATACTTACTGCGCGCGCTTTCTGGGCGGGCAGACGTGTG
GGCCACAGACGGTGCGAGGCGCACGGCCCTGCACCATCTCGCCAGGGGAA
CCTCGGATGCGCCCAGTGTGGCGCTTTGCTTGTTGGGGCTCGatcaggaa
ggggggaggccgcagcATTTGGAttgggaggacgtggagggccGGACTGC
AGTGCATTATGCCGCAAGCCGGGGGAACCTGCAAGTGCTTCGATTTTTGT
TGGGAAAAGGCGCCAATCCTTTGGCGGTGGATAAGGAAGGCTTAGATCct
ctccagctcctgctccaAGAAAAGTCCAGGAGCGTCTCAGTGCAGAGCAA
GGGGGGTGAGATTGAGCGATGCCTGCAGGAGGCGCAGCAGCATGCAAGGG
CCCTgaccgagggaggagcgCTGCACAGCCATGATAGCCAGGAAGtctcc
aagaagaagggttCAGGCATCACGTGCGTGTGGGAGTGCATGGCGCGGCT
CtgtggggaggcggtggaggacgccggcgatggcgaagaggacgatatTC
CCCAACCCGTTGAACATCAACTCCTCTGCGTTTTCCGCGCATCCAGCATT
CCTCCCGATGCAAGCGAGGTCTACTTGGATAACCTCCGTCGCCATGGCTA
CGATAATCTCATGGCGCTGCGCGCTATCGCTTCCGAACGCTTCAAACTTA
GCCTTGGCAAATACGTGCCTGATCGCCAGGATAGAAAGCGGCTTATTAAG
GCCTTGAATGCGATGATAGACACAGTGGACGAAAGTGGTAAGATCCCTGA
GCCACCACTTCATCTTCCTGTGGGCGAATACCTCAAACACCTGTTGAGCG
TCTCAGACGATCTCGCGATGCGTTACGCGGAGGGCTTGCGGGGGATGAAC
GTCCACACGGGAGCTCAGTTAGGCACGGCGTCCTATGACGAGGTGGAAAT
GAATCTAGGATCTACCTTATTGCAGGGGCATAAGAAAGCATTGAAAATTT
GGCTACGTCTTCGCGCAGCcgatagggagggaagcggacgGGGAGAAATG
AAGTCGCCCTGA back to top
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