Naga_100163g1, gene6124 (gene) Nannochloropsis gaditana

Overview
NameNaga_100163g1
Unique Namegene6124
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:281153..284952 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100163g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:281153..284952 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003824catalytic activity
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01490NO24G01490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6337rna6337-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6337rna6337Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6337

>rna6337-protein ID=rna6337-protein|Name=rna6337|organism=Nannochloropsis gaditana|type=polypeptide|length=1111bp
MYHGFEAEYGGVGEELTYPLCREEEMDTHPALGGPLDGVSTAMSALSTSF
AATGHGSGPAHEGHASGAFAPPSTEHAGVMCAAPMAMGTADASSVHLPLA
HVGSGSSGNSRYSGSGGDSGSVGTGGLHPSFSSGLHSSSGGAGGGMPNAE
LVRVRVDTSGKKLLREAALLTRLAEILLPKQERGSEEGRGWAEGDAGAVG
LTEWLAGELGNDTRRARFLLAMSGERDGEEEAVERGGDGGKALSRIRDAL
RAYVAGGSPAASLSHTASHHPLASLGPSLLPPPHLVIVVDHPPTALALTR
RALEAGLRVSVARNALHVLSEVIERGETYFHGLVLEVDSPIMSGLEAAMK
FRGLPSPLVVLGEGERGAEQGGPAAQTAGAGQGREGRRRGLEGRGGSMLS
ATAKLMMVMVVNGSRHANYSGFEAHALSAGVDYVAQEFEELSFENLKKQL
ERRCDVGMREAAGRALEDVAQGGEGRAGGEEGGRRGRGKAGKPSSGLRQG
LPLARLPSFTWTGALPLSRGESASLSRSSSETIRSGRPAWSAGETSAMDS
TIMGLSPWEDLSVPRGGSLLPMAHSHTAAAHVALAAGADGGGGEGGPDGG
GGGYGPGQASGGGEVAARELRRKDKRVRRACMYCHGKKLSCSFHRPCDRC
YALKQNCVEYVPKQRTLDSTGNVYCPPAPGPAARAKSEDGWGAEQDGVFG
KERKESLPSRTSSPSLSTSGSTYGVAPPPASASAAKNVGGPLLSMSSHSW
SHVGDNSGVGGGRSGVSEAGTRANSSGNQSSGSKRRRKGVEGGRFQREES
VAGGRRGKQGQDETGSGTGLGANEAEEARGRTDLVISPPSSASSAPSCPN
PHLLSLSPPSGLIPAATMFPACPPRTAAAAVGAAAAGAAAAGAAGGSWKS
EASDKSHPSSSSSTFRSPHQASTEGPGDEERIATVSYTPPAAYYTPSAGH
SGRQAASDPPRGRGRGGGRDRGRGWRSVSHPETQGSISTSGNGSCLYPHD
QQQQHMANMQHYHTEGLGPLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQYSHQDAQGPQQPVHPPPGTNTTSTMPHIPLHTGRLTDRPSTP
RTSTNTPLPRT
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Synonyms
Publications