Naga_100246g11, gene6104 (gene) Nannochloropsis gaditana

Overview
NameNaga_100246g11
Unique Namegene6104
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:231029..233550 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100246g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:231029..233550 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6315rna6315-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6314rna6314-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6315rna6315Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6314rna6314Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6315

>rna6315-protein ID=rna6315-protein|Name=rna6315|organism=Nannochloropsis gaditana|type=polypeptide|length=477bp
MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQ
AFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSL
LLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADP
RRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWI
PCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGL
VRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQ
PAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGW
DLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLE
HGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEVGV
ADQGGRQGHRCAQREHRDFDGLQKAGA
back to top

protein sequence of rna6314

>rna6314-protein ID=rna6314-protein|Name=rna6314|organism=Nannochloropsis gaditana|type=polypeptide|length=530bp
MGGWDMNGRKCEGERWRDDNVDDILLNSSWSTPVPLGAAPWGIAHTGMHQ
AFDPGKAEVFSASKAQICDIDDRSSNLHSHKGAAFHWDDDHDSLSRRLSL
LLLEFDRVCDLPSGTCDVPFGTTPALEARDTLVSASPGCSDAVAMPPADP
RRSPTVMSEALAAELVGVMSQCCARLQDDEGNGEDGEGRKDDVLRACVWI
PCLPPPRNSRDVPPQGGFPLRQEHREERPSEQFFTMICRLMGRRDAPVGL
VRQFCRHAVLPRLLRLQGAASRSLIDALARLASLRPSLVLTHVLVPLLCQ
PAGSLGSVQCEAVARVIKQGCFGMGEEGSGGFGGRRGVYLEKLLRGLCGW
DLSLNLGDERGNGAQERKSPEVVEGEESRGLEGNEKEGRSEKRRGGGGLE
HGRAMLYPVCEWTDVTLPVLTAVLGQRPTLSDETVLVVLERLRAALEGGG
DLMHSFKLAALINALQSKYGPQMQLFPTVMRHIISICEEGEGRDGAKGGC
SNSWSKNHKNGGGATLIRNTLRKVILSISE
back to top
Synonyms
Publications