psbO, gene6101 (gene) Nannochloropsis gaditana

Overview
NamepsbO
Unique Namegene6101
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:222661..225368 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100313g2
Gene biotypeprotein_coding
GenepsbO
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:222661..225368 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0006091generation of precursor metabolites and energy
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0009579thylakoid
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01680NO24G01680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6310rna6310-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6311rna6311-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6310rna6310Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6311rna6311Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6310

>rna6310-protein ID=rna6310-protein|Name=rna6310|organism=Nannochloropsis gaditana|type=polypeptide|length=238bp
MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPS
FLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLA
NRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFV
NTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERV
PFLFTVKELVATAAQPGNALKPGFQFGGSFKVRESFRC
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protein sequence of rna6311

>rna6311-protein ID=rna6311-protein|Name=rna6311|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MTIFIQHFYHCYSRLSIPSHLLTKTMKTAVLLASVGCAQAFVPQMNVQPS
FLDQLKNGVSKALPVLVGGSAFLAPSISNALTKEDLSSLSYLQVKGTGLA
NRCPEVVGEGSIALQGGKTYQLSDLCLEPKTWQVEEEVTNKRGETTKSFV
NTKLMTRQTYSLDGVSGDISVGEGGKIKFEEKDGIDYAATTVQLPGGERV
PFLFTVKELVATAAQPGNALKPGFQFGGSFKVPSYRSGLFLDPKGRGAVT
GYDMAVALPGLQNSVEGDEELFKENNKIFDVTSGNIELEVNKVNVEEGEV
GGVFVSTQFSDTDMGSKAPKKLLMKGIFYGRVAQ
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Synonyms
Publications