Naga_100076g3, gene5791 (gene) Nannochloropsis gaditana

Overview
NameNaga_100076g3
Unique Namegene5791
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:311078..312853 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100076g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:311078..312853 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009536plastid
GO:0016020membrane
GO:0009579thylakoid
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0006091generation of precursor metabolites and energy
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01170NO14G01170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5994rna5994-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5994rna5994Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5994

>rna5994-protein ID=rna5994-protein|Name=rna5994|organism=Nannochloropsis gaditana|type=polypeptide|length=217bp
MGPLSWKTPIHLCHQMAFMAQLQATCIRVHAILRNLSSYGFKFTGTHFLP
MHYPPSTTSRPHLSHTMKSIIALLLAAPALAFMPPTPAPQRTEVIMSASR
DWKKDLAKAAFVVMPMVAPLVAGAKIDYEGVGYLGGSEKIDVNNANVRVY
SRFPGMYPTVAGKIVSHGPYKSVADLYSISGLTEQEKSILKKYESKFITL
EPAPEYTIDRINNGLYR
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Synonyms
Publications