Naga_100381g5, gene5629 (gene) Nannochloropsis gaditana

Overview
NameNaga_100381g5
Unique Namegene5629
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:950048..951479 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100381g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:950048..951479 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03370NO11G03370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5830rna5830-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5829rna5829-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5830rna5830Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5829rna5829Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5830

>rna5830-protein ID=rna5830-protein|Name=rna5830|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MSEESMPLDTRFNEVEGGQDLYPDEKGVWNLVEEGEMKVQAAPMVHTVPC
VGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFRLLKTLQP
GEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALAQDCDVLV
HEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRAKRLIMTH
FSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLMLVPIPSPH
KMAEVGADD
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protein sequence of rna5829

>rna5829-protein ID=rna5829-protein|Name=rna5829|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MVHTVPCVGFVVTEKDKPGRLRAEYVRPIVERNKAGLLEQGLSDPNKIFR
LLKTLQPGEAVNLPDGTLLRAEEVMEAAKQGRKIVICGDTSDASGIAALA
QDCDVLVHEATNAFLLPFDKGTYMDVERFARAHGHSTPQMAGHFAHRVRA
KRLIMTHFSPRYKGDLSPESLAIMKRLEDMARKTSKLRADRVLAAHDLML
VPIPSPHKMAEVGADD
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Synonyms
Publications