Naga_100122g7, gene5512 (gene) Nannochloropsis gaditana

Overview
NameNaga_100122g7
Unique Namegene5512
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:632575..634909 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100122g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:632575..634909 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02290NO11G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5705rna5705-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5705rna5705Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5705

>rna5705-protein ID=rna5705-protein|Name=rna5705|organism=Nannochloropsis gaditana|type=polypeptide|length=619bp
MADVMAPIAPNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLST
RVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVD
AGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQAS
YTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDF
YFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIV
PVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVE
KYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEV
EVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELE
TKTRAGLPDAVLVRKVYSNEGRIRPAWRLKKFEADEMEVVEAGNAEQEDR
DLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTK
GKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELL
DDLELDDPDAPPDDHEAQVLVGDVSSTGIAGVSKDFAFTFQPKTRNDDRD
GNHAKTKDEQDAEEIYKEL
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Synonyms
Publications