NO11G02290, NO11G02290 (gene) Nannochloropsis oceanica

Overview
NameNO11G02290
Unique NameNO11G02290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1881
Alignment locationchr11:737136..739016 +

Link to JBrowse

Properties
Property NameValue
Description60s ribosomal export protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:737136..739016 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007064NMD3
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO11G02290 vs. NCBI_GenBank
Match: EWM24981.1 (60s ribosomal export protein [Nannochloropsis gaditana])

HSP 1 Score: 883.2 bits (2281), Expect = 4.600e-253
Identity = 458/620 (73.87%), Postives = 497/620 (80.16%), Query Frame = 0
Query:    1 MADVMQPVAATQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEVMEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKNDRMSMMAANKTTHMMDGEEILVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLDELLDDLELDDPDAPPDDHEAQVLVGEGASAGIRGVSKDFAFTFLPGKGHTGGGVGESGSKKRMDEGEE 621
            MADVM P+A  QTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIA+GLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRL+DAGWIWTEPHSKRLKLKLTVQ+EVMNGAVLQEAVVVEFVVRNQQCPDC ASYTIGAW+AIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGF DGMDFYFA+RNQAARFTEFLET CPV+VKQSKKLVSQDDHSN+FNYKYT+IIEIVPVCKDDLV+LPTKLAQNLGDIARL LV RVLNHLHL+DP+TGQTA+++ +K+HKAGFEF+ALLSA RLV+FMVLG EP + PTKTSAP RR+ RHRLAEVEVALM+DLG NDTRYRV THLGHILRAGDTVLGYLLATAS+NS+DA+ELE KTRAGLPD VLVRKVYS+EGR+ +PAW+LK FEADEMEV+EA +A             LEGDREMRR VN+YK  R     A  T H    E   +G+                                                 ++LDELLDDLELDDPDAPPDDHEAQVLVG+ +S GI GVSKDFAFTF P K       G     K   + EE
Sbjct:    1 MADVMAPIAPNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRI-RPAWRLKKFEADEMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDH----ENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHEAQVLVGDVSSTGIAGVSKDFAFTFQP-KTRNDDRDGNHAKTKDEQDAEE 614          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: CBN79871.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 487.3 bits (1253), Expect = 7.300e-134
Identity = 265/497 (53.32%), Postives = 342/497 (68.81%), Query Frame = 0
Query:   21 MCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVR--RANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVY---SSEGRLKKPA-WKLKTFEAD------EMEVMEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKNDRMSMMA------ANKTTHMMDGEEILVGE 500
            MC++ I PNPT+MC+ C+RTQV+I  G++T +TMHQCRGC +Y+      GW   + ESRELMAVCLRK++GL +++L+DA WIWTEPHS+RLK+KLTVQKEV NGAVLQ+A+VV FVVRNQQC  C A++T   W A+VQVRQRVDHKRTF +LEQLILKHNAH+Q   IQ FKDGMDFYF +++ +ARF +FLE V P KVK SKKLVS D+HSNIFN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL++ QR+ + +  VDP+T QTAD+T +K+ +  +EF +LLS+ RLV ++VLG EP+    + SAP R  R  + R+AEVE+A   DLG ND R   V+HLGHILRAGDTVL Y +++A++   +A       +  LPDVVLVRKVY     EG  K    WKL   E D                XXX          LE D++MRR VNLYK    +  A      A +    MD EE+ + E
Sbjct:   30 MCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYL----RPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWR--YEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEA---TGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGXXXXXXXXXXXXXXXXXXEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPAAADGDGAMEDVEEMDEEEVRLDE 517          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: XP_008611919.1 (nonsense-mediated mRNA decay protein 3 [Saprolegnia diclina VS20] >EQC34513.1 nonsense-mediated mRNA decay protein 3 [Saprolegnia diclina VS20])

HSP 1 Score: 463.4 bits (1191), Expect = 1.100e-126
Identity = 226/460 (49.13%), Postives = 315/460 (68.48%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEV-MEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKND 477
            +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++L+DAGW+WTEPHSKRLKLKLTVQKEVMNGA+LQ++ VV F+VRNQQC +C AS+T  +W+A+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F +RN A RF +FL    P+K+K +KKL+S D+HSN  NYK+T  +++  VCKDDLV LP KLA+ LG+I+ L +V +V + +H++DP T Q A++  DK+ +  + F+AL S+ +LV++ VL   P+ IPT    PVR   + RLAE+E+   +D GVNDTR++  THLG +L  GDT +GY L+T+  N SD + L+ +    LPDV+LVRK +    + +   WKLK  E  E  V ++  +              LE D+EMR  +N+YK D
Sbjct:   13 LCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLD-EAGITLPDVILVRKQFLRRVQKRSRNWKLKNIEGIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKVD 465          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: XP_012195053.1 (hypothetical protein SPRG_01450 [Saprolegnia parasitica CBS 223.65] >KDO34280.1 hypothetical protein SPRG_01450 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 463.4 bits (1191), Expect = 1.100e-126
Identity = 226/460 (49.13%), Postives = 315/460 (68.48%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEV-MEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKND 477
            +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++L+DAGW+WTEPHSKRLKLKLTVQKEVMNGA+LQ++ VV F+VRNQQC +C AS+T  +W+A+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F +RN A RF +FL    P+K+K +KKL+S D+HSN  NYK+T  +++  VCKDDLV LP KLA+ LG+I+ L +V +V + +H++DP T Q A++  DK+ +  + F+AL S+ +LV++ VL   P+ IPT    PVR   + RLAE+E+   +D GVNDTR++  THLG +L  GDT +GY L+T+  N SD + L+ +    LPDV+LVRK +    + +   WKLK  E  E  V ++  +              LE D+EMR  +N+YK D
Sbjct:   13 LCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVASSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLD-EAGITLPDVILVRKQFLRRVQKRSRNWKLKNIEGIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKVD 465          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: OQR85458.1 (60S ribosomal export protein NMD3 [Achlya hypogyna])

HSP 1 Score: 463.0 bits (1190), Expect = 1.500e-126
Identity = 228/460 (49.57%), Postives = 315/460 (68.48%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEV-MEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKND 477
            +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++L+DAGW+WTEPHSKRLKLKLTVQKEVMNGA+LQ++ VV F+VRNQQC +C AS+T  +W+A+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F++RN A RF +FL    P+K+K +KKL+S D+HSN  NYK+T  +++  VCKDDLV LP KLA+ LG+I+ L LV +V + +H++DP T Q A++  DK+ +  + F+AL S+ +LV++ VL   P+ IPT    PVR   + RLAE+E+   +D GVNDTR++  THLG +L  GDT +GY L+T+  N +D + L+ +    LPDVVLVRK +    + +   WKLK  E  E  V  +  D              LE D+EMR  +N+YK D
Sbjct:   13 LCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNQSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTTSIESHPDGVDFFFSERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTENYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVEYTVLDSTPMQIPTLGGVPVRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDADTKPLD-EAGITLPDVVLVRKQFLRRVQKRSRNWKLKNIEGIESAVPTKKADQNKTEMDYQHFLDELEDDKEMRSKINIYKVD 465          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: OQS02570.1 (60S ribosomal export protein NMD3 [Thraustotheca clavata])

HSP 1 Score: 459.9 bits (1182), Expect = 1.200e-125
Identity = 231/478 (48.33%), Postives = 319/478 (66.74%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEV-MEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKNDRMSMMAANKTTHMMDGEE 495
            +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++L+DAGWIWTEPHSKRLKLKLTVQKEVMNGA+LQ++ VV F+VRNQQC +C AS+T  +W+A+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F +RN A RF +FL    P+K+K +KKL+S D+HSN  NYK+T  ++I  VCKDDLV LP KLA+ LG+I+ L +V +V + +H++DP T Q A++  DK+ +  + F+AL S+ +LV + VL   P+ I T    PVR   + RLAE+EV   +D GVNDTR+  ++HLG IL  GDT +GY L+T+  N +D + LE +    LPDV++VRK +    + +   WKLK  E  E  + ++  D              LE D+ MR  +N+YK D ++     K    MD EE
Sbjct:   13 LCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTTSIESHPDGVDFFFVERNHALRFVDFLHETVPIKLKTAKKLISADNHSNTANYKFTYAVDIATVCKDDLVALPLKLARQLGNISPLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVDYTVLDSNPMQILTVGGVPVRTNRKTRLAEMEVVRNSDFGVNDTRFTTISHLGMILNVGDTAMGYDLSTSVFNDADTKPLE-EAGITLPDVIIVRKQFLRRVQKRSRNWKLKNIEGIESSIPLKKADQTKQEMDYQHFLDELEDDKNMRSKINIYKMDEVA-----KDDDDMDVEE 478          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: XP_009823848.1 (hypothetical protein H257_02059 [Aphanomyces astaci] >ETV87049.1 hypothetical protein H257_02059 [Aphanomyces astaci])

HSP 1 Score: 457.2 bits (1175), Expect = 8.100e-125
Identity = 224/458 (48.91%), Postives = 310/458 (67.69%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEV-MEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYK 475
            +CC+CA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   + ESREL+A+CL+K+ GLN+++L+DAGWIWTEPHSKRLKLKLTVQKEVMNGA+LQ++ +V F+VRNQQC DC AS+T  +W+A+VQVRQ+V+HKRTF  LEQLILKH  H +   I+   DG+DF+F +RN A RF +FL+   P+ ++ +KKL+S D+HSN  NYK+T  ++I PVCKDDLV LP KLA+ LG+I+ L LV +V + +H++DP T Q A++  DKF +    F+AL S+ +L ++ VL   P+ +PTK   PVR   + RLA+++V    D GVNDT +  VTHLG +L  GDT +GY L+T+  N  D + L+ +    LPDV+LVRK +    + +   WKLKT E  E  V ++  D              LE D+EMR  +N+YK
Sbjct:   14 LCCICAVAIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISIRTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVSSSIHVIDPFTMQRAEIDNDKFWRT--PFKALRSSKQLTEYTVLDSTPLEMPTKGGVPVRTNRKTRLADLDVVRNTDFGVNDTHFNTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLD-EAGISLPDVILVRKQFLRRVQKRTRKWKLKTIEGVEPAVPLKKADQTKHDLDYEHFLNDLEEDKEMRARINIYK 464          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: XP_008865506.1 (hypothetical protein H310_03429 [Aphanomyces invadans] >ETW05729.1 hypothetical protein H310_03429 [Aphanomyces invadans])

HSP 1 Score: 455.3 bits (1170), Expect = 3.100e-124
Identity = 223/458 (48.69%), Postives = 311/458 (67.90%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEV-MEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYK 475
            +CC+CA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   + ESREL+A+CL+K+ GLN+++L+DAGWIWTEPHSKRLKLKLTVQKEVMNGA+LQ++ +V F+VRNQQC DC AS+T  +W+A+VQVRQ+V+HKRTF  LEQLILKH  H +   I+   DG+DF+F +RN A RF +FL+   P+ +K +KKL+S D+HSN  NYK+T  ++I PVCKDDLV LP KLA+ LG+I+ L LV +V + +H++DP T Q A++  DK+ +  + F+AL S+ +L ++ VL   P+ I TK   PVR   + RLA+V++   +D GVND R+  VTHLG +L  GDT +GY L+T+  N  D + L+ +    LPDVVLVRK +    + +   WKLKT E  E  + ++  D              LE D++MR  +N+YK
Sbjct:   13 LCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLTEYTVLDSSPLEISTKGGIPVRTNRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLD-EAGISLPDVVLVRKQFLRRVQKRSRKWKLKTIEGIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYK 463          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: XP_008912632.1 (hypothetical protein PPTG_16639 [Phytophthora parasitica INRA-310] >ETI35682.1 hypothetical protein F443_18027 [Phytophthora parasitica P1569] >ETK75928.1 hypothetical protein L915_17546 [Phytophthora parasitica] >ETL29373.1 hypothetical protein L916_17438 [Phytophthora parasitica] >ETM35833.1 hypothetical protein L914_17341 [Phytophthora parasitica] >ETN01951.1 hypothetical protein PPTG_16639 [Phytophthora parasitica INRA-310] >ETO64414.1 hypothetical protein F444_18050 [Phytophthora parasitica P1976] >ETP05508.1 hypothetical protein F441_17897 [Phytophthora parasitica CJ01A1] >ETP33635.1 hypothetical protein F442_17866 [Phytophthora parasitica P10297] >KUF95513.1 hypothetical protein AM588_10010368 [Phytophthora nicotianae])

HSP 1 Score: 432.2 bits (1110), Expect = 2.800e-117
Identity = 221/460 (48.04%), Postives = 304/460 (66.09%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFE-ADEMEVMEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKND 477
            +CCMCA  I  N  N C+ CL++QV++  G+   V +HQCRGC+++        W   E ESREL+A+CL+K+  LNR++LIDA WIWTEPHS+RLKLKLTVQKEVM+  ++Q++ VV FVVRNQQC  C AS+   +W A+VQVRQRVDHKRTF  LEQLILKH AH +   I+   DG+DF+F++RN A RF +FL+   P+KVK +KKL+S D+HSN  NYK+T  +EI PVCKDDLV+LP KLA+ LG+++ L LVQ V + +H+VDP T Q A++ ++K+ +  + F+AL S   +  F VL   P+ IP+     +R   + RLA++EV   AD GVNDTR+R V+HLG +L  GD+  GY L +A  N +D   L  ++   LPDVVLV+K++    + +   WKLK  E  ++   +   D              LE D+E+R  +NLYK+D
Sbjct:   12 LCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW----SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWR--YPFRALRSIKAMTDFTVLDSNPMAIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPL-VQSGMTLPDVVLVKKMFPRRIQKRARNWKLKKMEGVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDD 464          
BLAST of NO11G02290 vs. NCBI_GenBank
Match: ETL82586.1 (hypothetical protein L917_17278 [Phytophthora parasitica])

HSP 1 Score: 432.2 bits (1110), Expect = 2.800e-117
Identity = 221/460 (48.04%), Postives = 304/460 (66.09%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIATGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLIDAGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCASYTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDFYFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIVPVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTADKFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEVEVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELEAKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFE-ADEMEVMEARDAXXXXXXXXXXXXXLEGDREMRRNVNLYKND 477
            +CCMCA  I  N  N C+ CL++QV++  G+   V +HQCRGC+++        W   E ESREL+A+CL+K+  LNR++LIDA WIWTEPHS+RLKLKLTVQKEVM+  ++Q++ VV FVVRNQQC  C AS+   +W A+VQVRQRVDHKRTF  LEQLILKH AH +   I+   DG+DF+F++RN A RF +FL+   P+KVK +KKL+S D+HSN  NYK+T  +EI PVCKDDLV+LP KLA+ LG+++ L LVQ V + +H+VDP T Q A++ ++K+ +  + F+AL S   +  F VL   P+ IP+     +R   + RLA++EV   AD GVNDTR+R V+HLG +L  GD+  GY L +A  N +D   L  ++   LPDVVLV+K++    + +   WKLK  E  ++   +   D              LE D+E+R  +NLYK+D
Sbjct:   12 LCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW----SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWR--YPFRALRSIKAMTDFTVLDSNPMAIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPL-VQSGMTLPDVVLVKKMFPRRIQKRARNWKLKKMEGVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDD 464          
The following BLAST results are available for this feature:
BLAST of NO11G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24981.14.600e-25373.8760s ribosomal export protein [Nannochloropsis gadi... [more]
CBN79871.17.300e-13453.32conserved unknown protein [Ectocarpus siliculosus][more]
XP_008611919.11.100e-12649.13nonsense-mediated mRNA decay protein 3 [Saprolegni... [more]
XP_012195053.11.100e-12649.13hypothetical protein SPRG_01450 [Saprolegnia paras... [more]
OQR85458.11.500e-12649.5760S ribosomal export protein NMD3 [Achlya hypogyna... [more]
OQS02570.11.200e-12548.3360S ribosomal export protein NMD3 [Thraustotheca c... [more]
XP_009823848.18.100e-12548.91hypothetical protein H257_02059 [Aphanomyces astac... [more]
XP_008865506.13.100e-12448.69hypothetical protein H310_03429 [Aphanomyces invad... [more]
XP_008912632.12.800e-11748.04hypothetical protein PPTG_16639 [Phytophthora para... [more]
ETL82586.12.800e-11748.04hypothetical protein L917_17278 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002025NSK002025Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02290.1NO11G02290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591469gene_5124Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100122g7gene5512Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02290.1NO11G02290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02290 ID=NO11G02290|Name=NO11G02290|organism=Nannochloropsis oceanica|type=gene|length=1881bp
ATGGCGGACGTCATGCAGCCCGTGGCGGCGACCCAGACACCGGTGGCTGC
CATTTGCTGCATGTGCGCCATCAACATCCAGCCCAACCCCACCAACATGT
GCCTGCAGTGTCTTCGGACCCAAGTCAACATTGCCACGGGTCTGTCCACG
CGGGTGACCATGCACCAATGCCGTGGCTGCCTCAAGTACATGGGCGGCTC
GGGTGGAACGGGCTGGTCGCACTACGAGGCCGAGTCTCGGGAACTGATGG
CCGTGTGCTTGCGCAAGGTGGCGGGCCTGAATCGCTTGCGCCTGATTGAC
GCCGGTTGGATTTGGACGGAGCCCCACTCGAAGCGGCTGAAGCTAAAGCT
GACGGTGCAGAAAGAGGTGATGAACGGCGCCGTCCTCCAAGAGGCGGTCG
TTGTGGAGTTTGTTGTGCGCAATCAGCAGTGCCCGGACTGCTGCGCGTCC
TACACCATCGGGGCTTGGGAGGCCATTGTCCAAGTCCGGCAACGGGTAGA
CCACAAGCGGACGTTCTTGCACCTTGAGCAACTGATTCTGAAGCATAACG
CCCATGCGCAGGCCTTGCAGATCCAGGGCTTCAAGGACGGGATGGATTTT
TATTTTGCGAAGCGGAACCAGGCCGCCCGGTTTACAGAGTTTTTGGAGAC
CGTTTGCCCTGTCAAGGTGAAGCAGTCCAAGAAGCTGGTCTCGCAAGACG
ATCACTCGAACATCTTTAACTACAAGTACACGAGTATAATTGAGATAGTG
CCTGTGTGCAAGGACGACTTGGTGGTGCTTCCCACGAAGCTCGCCCAGAA
CCTGGGGGACATCGCCCGCCTCTCCCTCGTTCAACGTGTCCTCAATCACC
TCCACCTCGTCGATCCCATCACGGGGCAAACGGCCGATCTGACCGCCGAT
AAATTTCACAAGGCTGGGTTTGAATTCCAGGCGTTGCTATCTGCCGGGCG
CTTAGTCCAGTTTATGGTGTTGGGCATCGAGCCCATCATGATTCCGACCA
AGACTTCAGCACCTGTTCGTAGGGCAAATCGTCATCGACTGGCTGAGGTG
GAGGTGGCGCTGATGGCTGATTTAGGGGTGAATGACACGCGGTATCGAGT
GGTGACGCATTTGGGGCATATTTTGAGGGCTGGGGATACGGTGTTGGGAT
ATTTGCTAGCGACTGCGTCGATGAATAGTTCGGATGCGGAGGAGCTGGAA
GCGAAGACCCGGGCAGGGCTTCCGGACGTGGTGCTTGTCCGCAAGGTCTA
TTCGAGCGAAGGGAGGCTGAAGAAACCAGCGTGGAAGCTTAAGACATTTG
AGGCGGATGAGATGGAGGTGATGGAGGCGAGGGACGCTGAGAAAGAGGAT
AGGGAGCTTGAAGAATACAGGCAGCAGTTGGAGGGTGATAGGGAGATGCG
GAGAAATGTGAATTTGTACAAGAATGACAGGATGTCGATGATGGCCGCAA
ACAAGACAACACATATGATGGATGGGGAGGAGATATTGGTTGGAGAGAAA
AAGGCGAAGAAGCGCAAAAGCAAGAAAGGACTGACACCCGAGACGCCGCC
GACGAAAGCTGGTGGGGAGGAGGTCATGGGCATGGGCGAGAGAGAAGAGG
TGGACGACGACGACGACGACGACGACGAGGATGATGATGAAGCTGTGCAG
CTGGATGAGTTGCTGGACGACTTGGAGCTTGACGACCCAGACGCGCCCCC
TGACGACCATGAAGCGCAAGTGCTGGTGGGAGAGGGAGCTAGCGCCGGGA
TCCGGGGGGTCAGTAAGGATTTTGCTTTTACCTTTCTACCAGGCAAGGGC
CACACTGGCGGTGGAGTTGGAGAGAGTGGATCGAAAAAGAGGATGGATGA
AGGGGAGGAAGGCTTCGGTGATGACTTGTAG
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protein sequence of NO11G02290.1

>NO11G02290.1-protein ID=NO11G02290.1-protein|Name=NO11G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=627bp
MADVMQPVAATQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIATGLST
RVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLID
AGWIWTEPHSKRLKLKLTVQKEVMNGAVLQEAVVVEFVVRNQQCPDCCAS
YTIGAWEAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFKDGMDF
YFAKRNQAARFTEFLETVCPVKVKQSKKLVSQDDHSNIFNYKYTSIIEIV
PVCKDDLVVLPTKLAQNLGDIARLSLVQRVLNHLHLVDPITGQTADLTAD
KFHKAGFEFQALLSAGRLVQFMVLGIEPIMIPTKTSAPVRRANRHRLAEV
EVALMADLGVNDTRYRVVTHLGHILRAGDTVLGYLLATASMNSSDAEELE
AKTRAGLPDVVLVRKVYSSEGRLKKPAWKLKTFEADEMEVMEARDAEKED
RELEEYRQQLEGDREMRRNVNLYKNDRMSMMAANKTTHMMDGEEILVGEK
KAKKRKSKKGLTPETPPTKAGGEEVMGMGEREEVDDDDDDDDEDDDEAVQ
LDELLDDLELDDPDAPPDDHEAQVLVGEGASAGIRGVSKDFAFTFLPGKG
HTGGGVGESGSKKRMDEGEEGFGDDL*
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Synonyms
Publications