Naga_100049g5, gene5470 (gene) Nannochloropsis gaditana

Overview
NameNaga_100049g5
Unique Namegene5470
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:519401..520762 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100049g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:519401..520762 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042221response to chemical
GO:0009987cellular process
GO:0009719response to endogenous stimulus
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01870NO11G01870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5662rna5662-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5662rna5662Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5662

>rna5662-protein ID=rna5662-protein|Name=rna5662|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MGAEEGEKEVEPTEYYEERFREGGLRTEADEGGLDEERAARLADTFFFSR
KTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSG
KTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVA
SVARAMTRHMPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEE
NKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVP
VADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVR
KRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYH
SAVNPQDRQKNLDIFSSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDF
PRDPSEYVRRVGRTGRAGRVGRVTALVLGRQVGLARSIMEGNSKGARVHP
VPN
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Synonyms
Publications