NO11G01870, NO11G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01870 vs. NCBI_GenBank
Match: EWM25042.1 (dead-box atp-dependent rna helicase 50-like protein [Nannochloropsis gaditana]) HSP 1 Score: 661.4 bits (1705), Expect = 3.300e-186 Identity = 351/415 (84.58%), Postives = 375/415 (90.36%), Query Frame = 0 Query: 311 AARLADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKHLPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTALVLGKQVGLARSIMEGNSKGARVHPVPN 726 AARLAD FFFSRK F+EIGAS EA+AA+ S+GI+RPSK+Q IAYPH+L G+SCI+AEQTGSGKTLAYLLPLLQRLR LE G RA VVVLAPTAELAAQVA+VARA+T+H+PLRVCCVTGGKNPRTQGEMLK GVDVLIGTPGRVQYLLEE KVLLG MQALVLDEVDVMFLDDSFDL+VIGAAAPA TQFLFVTATLPV VADQI++EFPGVKKLWGPGLHKIAPQVEEVLVDCSGP EE+RNEET FVRKRDMLVQNLLKH RSLVFCNSIPTCRKVENALRRADR RWQ+LAYHSAVNP DR+K+L IFSSRVERPL+MVCTDRTSRGVDFD A+V+HVVLFDFPRDPSEYV XXXXXXXXXXXXXX ALVLG+QVGLARSIMEGNSKGARVHPVPN Sbjct: 39 AARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVXXXXXXXXXXXXXXXXALVLGRQVGLARSIMEGNSKGARVHPVPN 453
BLAST of NO11G01870 vs. NCBI_GenBank
Match: CEM01514.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 417.9 bits (1073), Expect = 6.300e-113 Identity = 239/420 (56.90%), Postives = 297/420 (70.71%), Query Frame = 0 Query: 310 AAARLADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKHLPLRVCCVTGGKNPRTQGEML-KSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVER----PLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTALVLGKQVGLARSIMEGNSKGARVHPVP 725 A++ D+ FFSRK F +IGAS E AM G RPSKIQ ++Y VL+G +C++A+QTGSGKTLAYL PLLQRLR E A PRA VVVLAPT ELA+QV+ V + LT P+R CVTGG N R Q M+ +SGVD+L+ TPGR++ +L+ GK+ L + ALVLDEVDV+FLDD+F L IG A +TQF+FVTAT+P +V QI +EFP ++++ GPGLH+IAP VEEVLVDCSGP +E +NE TAF RKR L L K V R+L+FCNSI CR+VENALRR DR R+Q+L YHS + D E+ IF++ P+V+V TD+ SRGVDFD+ V HV+LFDFPRDPSEYVR XXXXXXXXXX T+LVLG+QV LAR +ME N +G R+H VP Sbjct: 31 ASSSSDDELFFSRKQFADIGASDEMIEAMSIAGAKRPSKIQALSYRTVLSGKNCVVADQTGSGKTLAYLAPLLQRLRDEERAG-----KPRALPGSPRVVVLAPTTELASQVSRVLKKLTAVAPVRTACVTGGYNARDQMRMVERSGVDILVATPGRLRSMLQMGKLNLHQLSALVLDEVDVLFLDDTFLLQPIGEATAPSTQFVFVTATIPTSVFAQIKQEFPDLRRIMGPGLHRIAPGVEEVLVDCSGPKDEAKNEFTAFERKRKALAGQLDKVVVPRTLIFCNSIENCRRVENALRRLDRGRKRFQVLPYHSGI---DNERRREIFNAFTRENFLIPMVLVSTDQASRGVDFDQVEVGHVILFDFPRDPSEYVRRVGXXXXXXXXXXVTSLVLGRQVSLARELMEVNRRGERIHDVP 442
BLAST of NO11G01870 vs. NCBI_GenBank
Match: CBJ31982.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 398.3 bits (1022), Expect = 5.200e-107 Identity = 215/407 (52.83%), Postives = 279/407 (68.55%), Query Frame = 0 Query: 317 DFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKHLPLRVCCVTG--GKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTALVLGKQVGLARSIMEGNSKGARV 721 + F+S K+ +IGAS A +A++SLG+ RPSKIQ I+Y +L G C++A+QTGSGKTLAYL PL+QRLR LE A G RA V++LAPTAELA QV VA+ L+ +P R CC TG G+ +TQ ++L+ GVDVL+ TPGRV LLE G + L +A++LDEVDV+F+D++F L+ IG AP TQF+FVTATLP +V+D + +EFPG K L GPGLH++AP VEEVL+DCSGP E RNEET RKRD L+ L + R+LVFCN+I CR+VEN L RA R G +++ L YHSA++P ++ F S P+VMVCTDR+SRG+DFD+A VEHV+L+DFPRDP EY+R T L G+QV L R IM GN +G R+ Sbjct: 207 EHFYSIKSLPDIGASDLAVSALKSLGVVRPSKIQAISYSAILTGDHCVVADQTGSGKTLAYLAPLVQRLR-LEELAEVHG---RARPGRPRVLILAPTAELAQQVYGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPGEPRNEETGLARKRDALLSQLERRMALRTLVFCNTIQGCRQVENMLSRASR-GGQFETLVYHSAIDPKQAASNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRL 608
BLAST of NO11G01870 vs. NCBI_GenBank
Match: KDO46874.1 (hypothetical protein CISIN_1g005837mg [Citrus sinensis] >KDO46875.1 hypothetical protein CISIN_1g005837mg [Citrus sinensis]) HSP 1 Score: 355.9 bits (912), Expect = 2.900e-94 Identity = 201/419 (47.97%), Postives = 279/419 (66.59%), Query Frame = 0 Query: 315 ADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTK-HLPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF--SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 AD FFSRK+F E+G S +++ RPS+IQ +A+P V+ G SCILA+Q+GSGKTLAYLLP++QRLRQ L+ + + SPR VV+LAPTAELA+QV + R+L+K +P R VTGG +TQ E L+ GVDVLI TPGR +L++EG + L ++ +LDEVD++F D+ F++++ + +++P Q+LFVTATLPV + +++ + FP K + GPG+H+I+P +EE LVDCSG E D+ ETAF+ K+ L+Q + K V +++VFCN I TCRKVEN L+R DR R ++L +H+A++ R ++ F S E L +VCTDR SRG+DF A V+HVVLFDFPRDPSEYVR + V+GKQV LA+ IME N KG +H VP+ Sbjct: 260 ADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPR-------VVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIVTCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 669
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_006478533.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Citrus sinensis]) HSP 1 Score: 354.0 bits (907), Expect = 1.100e-93 Identity = 200/419 (47.73%), Postives = 279/419 (66.59%), Query Frame = 0 Query: 315 ADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTK-HLPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF--SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 A+ FFSRK+F E+G S +++ RPS+IQ +A+P V+ G SCILA+Q+GSGKTLAYLLP++QRLRQ L+ + + SPR VV+LAPTAELA+QV + R+L+K +P R VTGG +TQ E L+ GVDVLI TPGR +L++EG + L ++ +LDEVD++F D+ F++++ + +++P Q+LFVTATLPV + +++ + FP K + GPG+H+I+P +EE LVDCSG E D+ ETAF+ K+ L+Q + K V +++VFCN I TCRKVEN L+R DR R ++L +H+A++ R ++ F S E L +VCTDR SRG+DF A V+HVVLFDFPRDPSEYVR + V+GKQV LA+ IME N KG +H VP+ Sbjct: 264 ANGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPR-------VVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIVTCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 673
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_006441939.1 (DEAD-box ATP-dependent RNA helicase 50 isoform X1 [Citrus clementina] >ESR55179.1 hypothetical protein CICLE_v10019165mg [Citrus clementina]) HSP 1 Score: 353.2 bits (905), Expect = 1.900e-93 Identity = 200/419 (47.73%), Postives = 278/419 (66.35%), Query Frame = 0 Query: 315 ADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF--SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 AD FFSRK+F E+G S +++ PS+IQ +A+P V+ G SCILA+Q+GSGKTLAYLLP++QRLRQ L+ + + SPR VV+LAPTAELA+QV + R+L+K +P R VTGG +TQ E L+ GVDVLI TPGR +L++EG + L ++ +LDEVD++F D+ F++++ + +++P Q+LFVTATLPV + +++ + FP K + GPG+H+I+P +EE LVDCSG E D+ ETAF+ K+ L+Q + K V +++VFCN I TCRKVEN L+R DR R ++L +H+A++ R ++ F S E L +VCTDR SRG+DF A V+HVVLFDFPRDPSEYVR + V+GKQV LA+ IME N KG +H VP+ Sbjct: 260 ADGDFFSRKSFKELGCSDYMIESLKRQNFLCPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPR-------VVILAPTAELASQVLSNCRSLSKFGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEACLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 669
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_020552097.1 (DEAD-box ATP-dependent RNA helicase 50 [Sesamum indicum]) HSP 1 Score: 351.7 bits (901), Expect = 5.500e-93 Identity = 194/419 (46.30%), Postives = 280/419 (66.83%), Query Frame = 0 Query: 315 ADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTK-HLPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVERPLVM--VCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVPN 726 A+ FFSRK+F E+G S +++SL RPS IQ +A+ VL G SC++A+Q+GSGKTLAYL+PL+QRLRQ LE + +A +SPR VV+L PTAELA+QV ++ R+L+K +P R TGG RTQ E L+ G+DVLI TPGR +LL+EG + L +++ +LDEVD+++ D+ F+L++ + +AP Q+LFVTATLPV + +++ + FP + + GPG+H+ +P++EE+L+DCSG E +R +TAF+ K++ L+ + + V++++VFCN I TCRKVENAL+R DR+ R ++L +H+A+ R ++ F + + M VCTDR SRG+DF A V+HVVLFDFPRDPSEYVR +GKQV LAR I+E N KG +H VP+ Sbjct: 163 ANSDFFSRKSFKELGCSDYIIESLRSLQYVRPSHIQAMAFAPVLGGKSCVMADQSGSGKTLAYLVPLVQRLRQEELEGLSKSASQSPR-------VVILVPTAELASQVLSICRSLSKVGVPFRSMVATGGFRQRTQLENLRQGIDVLIATPGRFMFLLKEGFLQLTNLKSAILDEVDILYNDEDFELALQSLVNSAPVTAQYLFVTATLPVDIYNKVVEVFPDSEVIMGPGMHRTSPRLEEILIDCSGDEETERTPDTAFLNKKNALMHLVEESPVKKTIVFCNKIETCRKVENALKRFDRNEIRIKVLPFHAALEQESRLANIEAFRNFPPNNISMFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGKGKAFVFAVGKQVSLARRIIERNQKGHPLHDVPS 572
BLAST of NO11G01870 vs. NCBI_GenBank
Match: GAY56966.1 (hypothetical protein CUMW_175840 [Citrus unshiu]) HSP 1 Score: 351.7 bits (901), Expect = 5.500e-93 Identity = 199/419 (47.49%), Postives = 278/419 (66.35%), Query Frame = 0 Query: 315 ADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF--SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 AD FFSRK+F E+G S +++ PS+IQ +A+P V+ G SCILA+Q+GSGKTLAYLLP++QRLRQ L+ + + SPR VV+LAPTAELA+QV + R+L+K +P R VTGG +TQ E L+ GVDVLI TPGR +L++EG + L ++ +LDEVD++F D+ F++++ + +++P Q+LFVTATLPV + +++ + FP + + GPG+H+I+P +EE LVDCSG E D+ ETAF+ K+ L+Q + K V +++VFCN I TCRKVEN L+R DR R ++L +H+A++ R ++ F S E L +VCTDR SRG+DF A V+HVVLFDFPRDPSEYVR + V+GKQV LA+ IME N KG +H VP+ Sbjct: 260 ADGDFFSRKSFKELGCSDYMIESLKRQNFLCPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPR-------VVILAPTAELASQVLSNCRSLSKFGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCEVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEACLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 669
BLAST of NO11G01870 vs. NCBI_GenBank
Match: GAV69112.1 (DEAD domain-containing protein/Helicase_C domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 351.3 bits (900), Expect = 7.200e-93 Identity = 199/418 (47.61%), Postives = 278/418 (66.51%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTK-HLPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF--SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 D FFSRK+F ++G + +++ RP+ IQ +A+P V+ G SCI+A+Q+GSGKTLAYLLP++QRLRQ L+ + ++ +SPR VV+L PTAELA+QV + R+++K +P R VTGG RTQ E L+ GVDVLI TPGR+ YLL+EG + L ++ VLDE+D+++ D+ F+ S+ + ++P Q+LFVTATLPV + +++ + FP K + GPG+H+I+P +EEVLVDCSG + + +TAF+ K+ L+Q + K V ++L+FCN I TCRKVEN L+R DR G R Q+ +H+AV R +++ F S E L +VCTDRTSRG+DF A V+HVVLFDFPRDPSEYVR + V+GKQV LAR IME N KG +H VP+ Sbjct: 155 DAHFFSRKSFADLGCTQFMVDSLKHQLFLRPANIQAMAFPPVIEGKSCIIADQSGSGKTLAYLLPVIQRLRQEELQGLSISSSQSPR-------VVILLPTAELASQVFSNCRSMSKTGVPFRSMVVTGGFRQRTQLENLQLGVDVLIATPGRLMYLLKEGFLKLTNLRCAVLDEIDILYKDEDFEASLQSLINSSPVTAQYLFVTATLPVDIYNKLVEVFPDCKVIMGPGMHRISPGLEEVLVDCSGDVTV-KTPDTAFINKKSALLQLVEKTPVPKTLIFCNKIETCRKVENVLKRFDRKGTRLQVFPFHAAVAQETRLENMKEFTKSRPEEESLFLVCTDRTSRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGKGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPS 562
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_007137331.1 (hypothetical protein PHAVU_009G118200g [Phaseolus vulgaris] >ESW09325.1 hypothetical protein PHAVU_009G118200g [Phaseolus vulgaris]) HSP 1 Score: 349.4 bits (895), Expect = 2.800e-92 Identity = 193/423 (45.63%), Postives = 281/423 (66.43%), Query Frame = 0 Query: 311 AARLADDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVERPL--VMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 A D FFS K+F E+G + ++Q + ++RPS +Q +A+ VL+G +C++A+Q+GSGKTLAYL+P++QR+RQ LE + ++ ++PR V+VLAPTAELA+QV R+L+K +P + VTGG RTQ E L+ GVDVLI TPGR YL+ EG + L ++ VLDEVD++F D+ F++++ + +++P TQ+LFVTATLP V ++ + FP + + GPG+H+I+ ++EE+LVDCSG E+++ +TAF+ K+ LVQ + + V R++VFCN I TCRKVEN+L+R DR GNR Q+L +H+A+ R + F+ + + MVCTDR SRG+DF A V+HV+LFDFPRDPSEYVR + V+GKQV LA IME + KG +H VP+ Sbjct: 137 AKTTTDTNFFSLKSFKEVGCADYILQSLQKIFLTRPSHVQAMAFAPVLSGKTCVIADQSGSGKTLAYLVPIIQRVRQEELEGRSQSSSQAPR-------VLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQRTQLESLQQGVDVLIATPGRFLYLMNEGFLQLTNLRCAVLDEVDILFGDEDFEVALQRLISSSPVDTQYLFVTATLPKNVFTKLVEVFPDCEMIMGPGMHRISSRLEEILVDCSGEDEQEKTPDTAFLNKKTALVQLVEESPVPRTIVFCNKIETCRKVENSLKRFDRKGNRMQVLPFHAAMTQESRLASMAEFTRSPSQGVSQFMVCTDRASRGIDF--AGVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLASKIMERSRKGHPLHDVPS 550 The following BLAST results are available for this feature:
BLAST of NO11G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01870 ID=NO11G01870|Name=NO11G01870|organism=Nannochloropsis oceanica|type=gene|length=2599bpback to top protein sequence of NO11G01870.1 >NO11G01870.1-protein ID=NO11G01870.1-protein|Name=NO11G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=726bpback to top Synonyms
Publications
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