Naga_100005g85, gene5112 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g85
Unique Namegene5112
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:635475..637867 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g85
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:635475..637867 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042221response to chemical
GO:0008152metabolic process
GO:0006950response to stress
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01690NO10G01690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5292rna5292-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5292rna5292Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5292

>rna5292-protein ID=rna5292-protein|Name=rna5292|organism=Nannochloropsis gaditana|type=polypeptide|length=274bp
MAKLLSFLLLTQSAVISYGFIGKPCYPTKSGGERHAATTLRMRMTSAGVA
PDVLTFKNGSPLKLSRAAYLQKLAALTLGGVSLAGKSGSASAVPAAEGPD
LNSILLQKAGKSVRFGDAKGKKATVVVNVASQCALTGGNYPGLQELYEKY
HDQGLEILAFPSNQFGFQEPDPVEKVRNDMKDRFGVEFPIYDKVDVNGGG
AHPLYAALKKYEPELSGYSPKLSWNFTKFLINADGTPVRRYQPGVDPEEM
EADILSVLQGKKLPSARKKSLNEY
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Synonyms
Publications