Naga_100032g20, gene4988 (gene) Nannochloropsis gaditana

Overview
NameNaga_100032g20
Unique Namegene4988
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:311799..314227 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100032g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:311799..314227 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02980NO10G02980Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5168rna5168-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5167rna5167-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5168rna5168Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5167rna5167Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5168

>rna5168-protein ID=rna5168-protein|Name=rna5168|organism=Nannochloropsis gaditana|type=polypeptide|length=255bp
MCFKLPISICCHTHDSFHEQFHACSPQYEKDTRDMSQSFSYSYSFSFEYA
PTTSPSLVPAIAPTMQPNLPGTIPVVNLFLVVAGTPEEQFALVSALVLYF
IMALDVQESDISVDTPVLERLLHQSRRLADTDQGRLCSSGAPQNSTSISI
RNYEDAAKVQDSLDGIMNGTISLTAVEGDSTTFPVKDGICHGETTLSFVP
PPADTLNDKNKSSSEPEPLSATYISLIAVGGVAILCVIIFVARRRRPRST
VVAHN
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protein sequence of rna5167

>rna5167-protein ID=rna5167-protein|Name=rna5167|organism=Nannochloropsis gaditana|type=polypeptide|length=305bp
MSLVHYQQCSSAHKMICNANSSMAAVALIALLLSVFQVPLHASGTQSDDS
ISAESSSGSFSRLLAYDLPLPHDWIREYEKDTRDMSQSFSYSYSFSFEYA
PTTSPSLVPAIAPTMQPNLPGTIPVVNLFLVVAGTPEEQFALVSALVLYF
IMALDVQESDISVDTPVLERLLHQSRRLADTDQGRLCSSGAPQNSTSISI
RNYEDAAKVQDSLDGIMNGTISLTAVEGDSTTFPVKDGICHGETTLSFVP
PPADTLNDKNKSSSEPEPLSATYISLIAVGGVAILCVIIFVARRRRPRST
VVAHN
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Synonyms
Publications