Naga_100664g1, gene4942 (gene) Nannochloropsis gaditana

Overview
NameNaga_100664g1
Unique Namegene4942
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:169882..173262 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100664g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:169882..173262 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL016ngnoL016Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03710NO10G03710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5119rna5119-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5120rna5120-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5119rna5119Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5120rna5120Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5119

>rna5119-protein ID=rna5119-protein|Name=rna5119|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MHIPSTSSYSSPRDGFGALVILLVVAISLPSGTTTSSSSSSSSSSSSSSS
SSSSSSSSSSSSSASSSSSSSPTPLPTTRHRPCVKHKQQYRAYVWGDARW
LQPPSSTLSASLTTTPLSLPFPDVRSLAFGPSFAAILRRDGTVHWKSARS
PSFLPLAMPVGEHADRIVCTRDTIYALTTNGRVFFWSMPGLLRSLRTAST
ASSPPSSSTPGLPLEFASLAPRPTTDAPPSPPSLPPSLPPSPLPSFLSSS
HVVITGIAAGHDHVLMTTRDGTVLGVGSNAQGQLGFPATNAAFTEPREIP
FFLPPSLPPSLRPTRVEAGHAHSFVVCEREGGREGGREGEKESVIYAFGC
DRWLQLGLGRCLESDSHRNPLSPKLFSVILPCKLDFPISVHGRCTQSQCL
SSLPFPPLPSFPSLPPSLPPSLPPSLSSSY
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protein sequence of rna5120

>rna5120-protein ID=rna5120-protein|Name=rna5120|organism=Nannochloropsis gaditana|type=polypeptide|length=491bp
MHPMKLANLLTFPRQTISDPMLSLLRTTRLTPRTVFSITRGSRVYHRRGI
TRAKSCLSPKCMHIPSTSSYSSPRDGFGALVILLVVAISLPSGTTTSSSS
SSSSSSSSSSSSSSSSSSSSSSSSASSSSSSSPTPLPTTRHRPCVKHKQQ
YRAYVWGDARWLQPPSSTLSASLTTTPLSLPFPDVRSLAFGPSFAAILRR
DGTVHWKSARSPSFLPLAMPVGEHADRIVCTRDTIYALTTNGRVFFWSMP
GLLRSLRTASTASSPPSSSTPGLPLEFASLAPRPTTDAPPSPPSLPPSLP
PSPLPSFLSSSHVVITGIAAGHDHVLMTTRDGTVLGVGSNAQGQLGFPAT
NAAFTEPREIPFFLPPSLPPSLRPTRVEAGHAHSFVVCEREGGREGGREG
EKESVIYAFGCDRWLQLGLGRCLESDSHRNPLSPKLFSVILPCKLDFPIS
VHGRCTQSQCLSSLPFPPLPSFPSLPPSLPPSLPPSLSSSY
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Synonyms
Publications