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Properties
| Property Name | Value |
|---|
| Product | Regulator of chromosome condensation/beta-lactamase-inhibitor protein II |
| Orig transcript id | gnl|cribi|Naga_100664g1.4024.mrna |
| Orig protein id | gnl|cribi|Naga_100664g1.4024 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:169882..173262 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5119 ID=rna5119|Name=rna5119|organism=Nannochloropsis gaditana|type=mRNA|length=429bp
ATGTACGCTGTCACAGGCCTTGTGGTCGGTGCTTGCCTTGGTGGTCGTAA
GCCTGCCTGTTGCCTGAAGGACACGCGGAGAGATCCTCCAGCAGCCTTGG
CTAGCCAGCCCCCTTCACTTAATCATGGCCAATACCCGAATGCTTGCCCG
ACGGGCAGTTTGGGCCGGGGGGACGGTCTTCGGTGGCTGGAATCACGGCC
TCTTTATTCGGCGGCACTGGTTTTCTGGGCAAGTATTTGCAGTTTGAATT
GGGAAAGACCGGCTTTCGGCTGTACCTGGCCAACCGGGGCGACGAGCAGG
ATGTCCGTGCGTACAAAGTCGCGTTTGATTTGGGGCAGTGGGCCTCGGTG
CCCTACAGCCTGCGGGACGAGGACTCGATTAAACGGGTGCTGGAAGGCAG
TGACATCGCCATCAATTGCATTGGTGTGA back to topprotein sequence of rna5119 >rna5119-protein ID=rna5119-protein|Name=rna5119|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MHIPSTSSYSSPRDGFGALVILLVVAISLPSGTTTSSSSSSSSSSSSSSS
SSSSSSSSSSSSSASSSSSSSPTPLPTTRHRPCVKHKQQYRAYVWGDARW
LQPPSSTLSASLTTTPLSLPFPDVRSLAFGPSFAAILRRDGTVHWKSARS
PSFLPLAMPVGEHADRIVCTRDTIYALTTNGRVFFWSMPGLLRSLRTAST
ASSPPSSSTPGLPLEFASLAPRPTTDAPPSPPSLPPSLPPSPLPSFLSSS
HVVITGIAAGHDHVLMTTRDGTVLGVGSNAQGQLGFPATNAAFTEPREIP
FFLPPSLPPSLRPTRVEAGHAHSFVVCEREGGREGGREGEKESVIYAFGC
DRWLQLGLGRCLESDSHRNPLSPKLFSVILPCKLDFPISVHGRCTQSQCL
SSLPFPPLPSFPSLPPSLPPSLPPSLSSSY back to topmRNA from alignment at CM002465.1:169882..173262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5119 ID=rna5119|Name=rna5119|organism=Nannochloropsis gaditana|type=mRNA|length=3381bp|location=Sequence derived from alignment at CM002465.1:169882..173262+ (Nannochloropsis gaditana)
GGGGTTTTTGGCGCGAATCGTCATTTCGCCTAGTCCACGTCTATTATCTG
CATAAACATAACGCATTGGATACTCTACTGGTCTTCAGCAATCCTGAGTT
TTGGTTGAAAAATGGATAAGTATCTTATCAATCATATTTACGACGAGCCA
GGGAGAAATTTTTGCCCTTGGGGATTAAATTACCGGTATCTGAAAATTGG
TCTTGTCATGAATGCATCCGATGAAGCTTGCCAATTTGCTCACTTTTCCC
AGGCAGACCATCAGTGATCCAATGCTTTCCCTGTTACGGACCACAAGATT
GACTCCTCGAACAGTGTTCAGCATCACACGTGGAAGTCGGGTCTATCATC
GGAGGGGAATTACAAGAGGTGAGCGTGATCCTCACACTTCACTGACGTCG
GCCCATGTACTTGTCAGCAGCCATGATATTTTCTATCAACGCAGCTCTTG
ATTCCCATGCGTAGTCATTGGACTGTGGCTTTTGGGTTTAAAAATGCGAT
GAAGCCTAGTGCTTTGAAACCGACGGATCCTTGCATTTGTCGTTCGATTC
ACCGTTTATCACTTCTCAGTGACAGCAATATTTTGATTCGACCTTGGCAT
TTCCAACAGCAAAGTCTTGTCTTTCACCGAAGTGCATGCATATTCCGTCG
ACATCGTCCTATTCTTCTCCtcgtgatggatttggagcCCTTGTTATCCT
CCTTGTTGTTGccatttcccttccttctggcaccacaacctcctcctcct
cctcctcctcctcctcctcctcctcctcctcctcctcctcctcttcttct
tcttcttcttcttcttcctcttctgcctcctcctcctcctcttcttctcc
tacTCCTCTACCCACAACCCGTCACCGACCATGCGTCAAGCATAAACAGC
AGTACCGGGCCTACGTATGGGGAGACGCCCGGTGGCTACAgccgccttcc
tctaccttgagtgcctccttgaccacgacccctctctctctccctttccc
tgacGTACGCAGCCTTGCCTTTGGGCCCTCTTTCGCAGCCATTCTCAGGC
GTGACGGGACGGTGCATTGGAAAAGCGCGCGAAGCCCGTCTTTTCTCCCG
CTGGCGATGCCCGTGGGAGAGCACGCGGACCGCATTGTCTGCACCAGGGA
CACGGTGAGCCGATGCTGCCTGTACACCGTTCTTAGTGCGCCACCCATCG
CGTCCGTCCACGTGCTTCCAATGCCCTGTCTTCCTACGTGGCTCGCCTGC
CGTTTAAAGAAGGGATCAAGGCGACGATTCGCAGGGGGCAAAGGACTCCT
CTGCctcacgcctccctccctctctccctccctccctccatccctctctc
cctccttccctcccttcctacgAAGATCTATGCCCTCACCACCAACGGCC
GTGTCTTCTTCTGGTCAATGCCTGGTCTGTTGCGCTCTCTCCGGACagct
tccaccgcctcctcccctccttcctcgtcgacCCCTGGATTGCCTCTGGA
ATTTGCGTCGCTCGCCCCACGCCCTACGACCGAcgcgcccccttcccctc
cctccctccctccctccctccctccttcccccctgccttccttcttgtcc
tcctcccacgtgGTCATCACCGGGATCGCAGCCGGGCATGATCACGTGCT
GATGACGACCAGAGATGGGACTGTGTACgtcgcttcccctcctctattct
tccccctcctccccccggggaaattcgctcttcctcttcttctcttctcc
gttttttccctctcgatTCGCGTCCGACTGTGGTTGATCACGTTGATATA
TTTTTCGGAATAAGGCACCCTGCAGGGTGCCCGTCACCGAaatctccctc
ccaccctccttccttccctccctccctccccctcttcctcactccctccc
tcccaatcttcctcttcccgttCTACCCTCCCTTGactctcatcctcccc
cttccctttcttcccccagGCTAGGTGTGGGCAGCAATGCTCAAGGGCAA
TTAGGATTCCCGGCGACTAATGCCGCGTTCACAGAACCTCGCGAAAtacc
tttcttcctccctccctccctccctccctccctccgtcccacaCGGGTTG
AAGCGGGCCACGCCCACTCCTTCGTCGTctgcgagagggagggagggagg
gaaggagggagggaaggagaaaaagaatcGGTGATCTACGCCTTTGGATG
CGATCGGTGGCTGCAGCTCGGCTTGGGTAGGTGCCTTGAGAGCGATTCCC
ACCGAAACCCTCTTTCGCCCAAGCTCTTTTCAGTCATCCTGCCTTGCAAG
CTCGATTTCCCAATATCTGTGCATGGCCGCTGCACTCAATCTCAGTGTCT
CAGCTctctgcctttccccccgctaccttccttcccctctcttccgccgt
ccctccctccctccctccctccctccctctcttcctcgtaTTAGGCGAGG
CGTGGGCCGCGAGAGGCGGCCCCCTCTGCTTTCGTCCTCAGCCTCTACAC
ATCTTGCCGCCATtaccgtcctcccccccgtcctccccctttacCCCGCC
CTCGGGGGACAAGAAGCTGCTCGGAgtaagggggggaggggatcacacgc
tcttcctcctcgagcgacaggggaaggcagggagggaaggagggagggaa
gagaaaagggacCATCAGCTATGGGCTGCGGGCCACGGTCAGTGGGGGCA
GCTCGGAACGGGCAATAGAATTCATGCAGGGGGGCCCCTGCCggtgaggg
atggaggggaggaggggcgcgagggcgagagggaagggaagggaaggcgc
aGGATTGTTGAGGTAAAAGCCTTTCTCGTGATGAGAAAAGTTTTTCTCGT
GATGGGAAACGTTCTTCTCGTGATGTTTGAGGTGTCTTTGGACTCTTTCC
CTGTCTTTTCTTGTTTTGTAACCCCGTCTCCGTAACGTACATTTCGTTTg
catcctcctttctctgcaGGTGCTTTTGCCTAGCTCTACGTGCATCTCAC
AAGTTGCTGTCGGACGGGCTCACAGCTTGCTTTTGACAAgcgaggacagg
gaggaaggaggaagagggggagggtgggtgtATGGATGGGGGAAGAATCA
AAAGCGCCAGGCCAATTTCGCCTGTCCATGTGAAAAAACGAAGGGCGACA
TCTTGCAACCTGTGATGGTGCCTTTGTTTGCGATGGAGGGCACGGGTGCA
GGGAtcgggagggtggagggggtgttCGCGGGCTATGACTCGAGCGGGGT
CGTCATTCAATGCGATGATGATGCAAACGAGAATGGGACGGAAGGGCATT
GAAGGCAAGCTTTAAAGAAATCTTAGTAATGTGGCTATTTTTTTCGTGCC
GTGAATAATTTGCTTGACTTCAAGGatgcag back to topCoding sequence (CDS) from alignment at CM002465.1:169882..173262+ >rna5119 ID=rna5119|Name=rna5119|organism=Nannochloropsis gaditana|type=CDS|length=3879bp|location=Sequence derived from alignment at CM002465.1:169882..173262+ (Nannochloropsis gaditana)
ATGCATATTCCGTCGACATCGTCCTATTCTTCTCCtcgtgatggatttgg
agcCCTTGTTATCCTCCTTGTTGTTGccatttcccttccttctggcacca
caacctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcttcttcttcttcttcttcttcttcctcttctgcctcctcctc
ctcctcttcttctcctacTCCTCTACCCACAACCCGTCACCGACCATGCG
TCAAGCATAAACAGCAGTACCGGGCCTACGTATGGGGAGACGCCCGGTGG
CTACAgccgccttcctctaccttgagtgcctccttgaccacgacccctct
ctctctccctttccctgacGTACGCAGCCTTGCCTTTGGGCCCTCTTTCG
CAGCCATTCTCAGGCGTGACGGGACGGTGCATTGGAAAAGCGCGCGAAGC
CCGTCTTTTCTCCCGCTGGCGATGCCCGTGGGAGAGCACGCGGACCGCAT
TGTCTGCACCAGGGACACGATCTATGCCCTCACCACCAACGGCCGTGTCT
TCTTCTGGTCAATGCCTGGTCTGTTGCGCTCTCTCCGGACagcttccacc
gcctcctcccctccttcctcgtcgacCCCTGGATTGCCTCTGGAATTTGC
GTCGCTCGCCCCACGCCCTACGACCGAcgcgcccccttcccctccctccc
tccctccctccctccctccttcccccctgccttccttcttgtcctcctcc
cacgtgGTCATCACCGGGATCGCAGCCGGGCATGATCACGTGCTGATGAC
GACCAGAGATGGGACTGTGCTAGGTGTGGGCAGCAATGCTCAAGGGCAAT
TAGGATTCCCGGCGACTAATGCCGCGTTCACAGAACCTCGCGAAAtacct
ttcttcctccctccctccctccctccctccctccgtcccacaCGGGTTGA
AGCGGGCCACGCCCACTCCTTCGTCGTctgcgagagggagggagggaggg
aaggagggagggaaggagaaaaagaatcGGTGATCTACGCCTTTGGATGC
GATCGGTGGCTGCAGCTCGGCTTGGGTAGGTGCCTTGAGAGCGATTCCCA
CCGAAACCCTCTTTCGCCCAAGCTCTTTTCAGTCATCCTGCCTTGCAAGC
TCGATTTCCCAATATCTGTGCATGGCCGCTGCACTCAATCTCAGTGTCTC
AGCTctctgcctttccccccgctaccttccttcccctctcttccgccgtc
cctccctccctccctccctccctccctctcttcctcgtaTTAGATGCATA
TTCCGTCGACATCGTCCTATTCTTCTCCtcgtgatggatttggagcCCTT
GTTATCCTCCTTGTTGTTGccatttcccttccttctggcaccacaacctc
ctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcct
cttcttcttcttcttcttcttcttcctcttctgcctcctcctcctcctct
tcttctcctacTCCTCTACCCACAACCCGTCACCGACCATGCGTCAAGCA
TAAACAGCAGTACCGGGCCTACGTATGGGGAGACGCCCGGTGGCTACAgc
cgccttcctctaccttgagtgcctccttgaccacgacccctctctctctc
cctttccctgacGTACGCAGCCTTGCCTTTGGGCCCTCTTTCGCAGCCAT
TCTCAGGCGTGACGGGACGGTGCATTGGAAAAGCGCGCGAAGCCCGTCTT
TTCTCCCGCTGGCGATGCCCGTGGGAGAGCACGCGGACCGCATTGTCTGC
ACCAGGGACACGATCTATGCCCTCACCACCAACGGCCGTGTCTTCTTCTG
GTCAATGCCTGGTCTGTTGCGCTCTCTCCGGACagcttccaccgcctcct
cccctccttcctcgtcgacCCCTGGATTGCCTCTGGAATTTGCGTCGCTC
GCCCCACGCCCTACGACCGAcgcgcccccttcccctccctccctccctcc
ctccctccctccttcccccctgccttccttcttgtcctcctcccacgtgG
TCATCACCGGGATCGCAGCCGGGCATGATCACGTGCTGATGACGACCAGA
GATGGGACTGTGCTAGGTGTGGGCAGCAATGCTCAAGGGCAATTAGGATT
CCCGGCGACTAATGCCGCGTTCACAGAACCTCGCGAAAtacctttcttcc
tccctccctccctccctccctccctccgtcccacaCGGGTTGAAGCGGGC
CACGCCCACTCCTTCGTCGTctgcgagagggagggagggagggaaggagg
gagggaaggagaaaaagaatcGGTGATCTACGCCTTTGGATGCGATCGGT
GGCTGCAGCTCGGCTTGGGTAGGTGCCTTGAGAGCGATTCCCACCGAAAC
CCTCTTTCGCCCAAGCTCTTTTCAGTCATCCTGCCTTGCAAGCTCGATTT
CCCAATATCTGTGCATGGCCGCTGCACTCAATCTCAGTGTCTCAGCTctc
tgcctttccccccgctaccttccttcccctctcttccgccgtccctccct
ccctccctccctccctccctctcttcctcgtaTTAGATGCATATTCCGTC
GACATCGTCCTATTCTTCTCCtcgtgatggatttggagcCCTTGTTATCC
TCCTTGTTGTTGccatttcccttccttctggcaccacaacctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctcttcttc
ttcttcttcttcttcttcctcttctgcctcctcctcctcctcttcttctc
ctacTCCTCTACCCACAACCCGTCACCGACCATGCGTCAAGCATAAACAG
CAGTACCGGGCCTACGTATGGGGAGACGCCCGGTGGCTACAgccgccttc
ctctaccttgagtgcctccttgaccacgacccctctctctctccctttcc
ctgacGTACGCAGCCTTGCCTTTGGGCCCTCTTTCGCAGCCATTCTCAGG
CGTGACGGGACGGTGCATTGGAAAAGCGCGCGAAGCCCGTCTTTTCTCCC
GCTGGCGATGCCCGTGGGAGAGCACGCGGACCGCATTGTCTGCACCAGGG
ACACGATCTATGCCCTCACCACCAACGGCCGTGTCTTCTTCTGGTCAATG
CCTGGTCTGTTGCGCTCTCTCCGGACagcttccaccgcctcctcccctcc
ttcctcgtcgacCCCTGGATTGCCTCTGGAATTTGCGTCGCTCGCCCCAC
GCCCTACGACCGAcgcgcccccttcccctccctccctccctccctccctc
cctccttcccccctgccttccttcttgtcctcctcccacgtgGTCATCAC
CGGGATCGCAGCCGGGCATGATCACGTGCTGATGACGACCAGAGATGGGA
CTGTGCTAGGTGTGGGCAGCAATGCTCAAGGGCAATTAGGATTCCCGGCG
ACTAATGCCGCGTTCACAGAACCTCGCGAAAtacctttcttcctccctcc
ctccctccctccctccctccgtcccacaCGGGTTGAAGCGGGCCACGCCC
ACTCCTTCGTCGTctgcgagagggagggagggagggaaggagggagggaa
ggagaaaaagaatcGGTGATCTACGCCTTTGGATGCGATCGGTGGCTGCA
GCTCGGCTTGGGTAGGTGCCTTGAGAGCGATTCCCACCGAAACCCTCTTT
CGCCCAAGCTCTTTTCAGTCATCCTGCCTTGCAAGCTCGATTTCCCAATA
TCTGTGCATGGCCGCTGCACTCAATCTCAGTGTCTCAGCTctctgccttt
ccccccgctaccttccttcccctctcttccgccgtccctccctccctccc
tccctccctccctctcttcctcgtaTTAG back to top
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