Naga_100222g7, gene4816 (gene) Nannochloropsis gaditana

Overview
NameNaga_100222g7
Unique Namegene4816
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:850822..853257 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100222g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:850822..853257 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0005635nuclear envelope
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03450NO12G03450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4987rna4987-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4987rna4987Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4987

>rna4987-protein ID=rna4987-protein|Name=rna4987|organism=Nannochloropsis gaditana|type=polypeptide|length=478bp
MAFTGVAPRQPPESPRSRLSPCLYSLPLLVVLFFLPAASPQTSWGSTLDA
TSNFFKSTWDSLATYTGYHDFCPFAMDFSETARRAVQAKIKCQDRALTAI
TTGLSHWEMTLMKDHPRPLVLAFTGPTGVGKTETAHVIARAILPKTELVG
SGKRPRGLLVFRGEDFADRRANVTSYIDVIKASLFKHLERCQGHAVVIFD
EVQKVVPGTLDALAEAISEHPTLTYYPAEDPRVIHRIDTSHVVFFLISDI
GWEDMLALLVAHGGHAAALPPHLLSQRVKAALDAQWQRLRCGKMIDTVVP
FLPLSQADMREVLDVKLAEMSEEHEGRLWARLETTEEVRAHLVQKPFVKY
VGYGLEDEGEGEDEGEGGGESEGKDCRAGKEVYWYAEFGARNLQTGGPLH
ALESAIVENMKPWRPLEVLDVRLNSQTGETELRWCPQETWMGGKGGEGGA
GTASRLWEEAGATGCDLRWAGDLKLKVG
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Synonyms
Publications