NO12G03450, NO12G03450 (gene) Nannochloropsis oceanica

Overview
NameNO12G03450
Unique NameNO12G03450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2256
Alignment locationchr12:945150..947405 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp-dependent protease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:945150..947405 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0005635nuclear envelope
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030553Torsin-like
IPR010448Torsin
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
IPR001270ClpA/B
Homology
BLAST of NO12G03450 vs. NCBI_GenBank
Match: EWM25698.1 (atp-dependent protease [Nannochloropsis gaditana])

HSP 1 Score: 664.8 bits (1714), Expect = 2.100e-187
Identity = 343/498 (68.88%), Postives = 374/498 (75.10%), Query Frame = 0
Query:   18 PPLPELRFLPILLFALLLSLLTSLPCIQAQTSWGSTFDATSHFFSSTWESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDLMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLPKTELVGIGKRPRGLMVLRGEDFADVHANVTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPED-ATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEVRFVGEGGRGGGREVSLLREEGGVTGCELRWAGNLKTKIG 515
            P  P  R  P L    LL +L  LP    QTSWGST DATS+FF STW+S+ATYTG+HDFCPFA DFSE ARRAV +KI+CQDRA+ AIT+GLSHWEM LMKD  RPLVLAFTGPTGVGKTETAHVIARA+LPKTELVG GKRPRGL+V RGEDFAD  ANVTSYID IK++LF+HL +CQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYY  ED   IHR+DTSHV FFLISDIGWEDML LL+AHGG AAALPPHLLSQRVK ALDAQW RL+ GK+ID +VPFLPLSQA MRE+LD+KL EM EEH GRLWARLETTE VR +LV+ PFVKY GYG EDE E                  G     KE                          VYW+AEFGARNLQTGGPLHALESAIVE+MKPWRPLEVLDVR N+QT ETELRWCP E    G+G        S L EE G TGC+LRWAG+LK K+G
Sbjct:   12 PESPRSRLSPCLYSLPLLVVLFFLPAASPQTSWGSTLDATSNFFKSTWDSLATYTGYHDFCPFAMDFSETARRAVQAKIKCQDRALTAITTGLSHWEMTLMKDHPRPLVLAFTGPTGVGKTETAHVIARAILPKTELVGSGKRPRGLLVFRGEDFADRRANVTSYIDVIKASLFKHLERCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYPAEDPRVIHRIDTSHVVFFLISDIGWEDMLALLVAHGGHAAALPPHLLSQRVKAALDAQWQRLRCGKMIDTVVPFLPLSQADMREVLDVKLAEMSEEHEGRLWARLETTEEVRAHLVQKPFVKYVGYGLEDEGEXXXXXXXXXXXXXXXXXXG-----KE--------------------------VYWYAEFGARNLQTGGPLHALESAIVENMKPWRPLEVLDVRLNSQTGETELRWCPQETWMGGKGXXXXXXTASRLWEEAGATGCDLRWAGDLKLKVG 478          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: XP_012196380.1 (hypothetical protein SPRG_02414 [Saprolegnia parasitica CBS 223.65] >KDO32716.1 hypothetical protein SPRG_02414 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 240.0 bits (611), Expect = 1.700e-59
Identity = 160/489 (32.72%), Postives = 247/489 (50.51%), Query Frame = 0
Query:   35 LSLLTSLPCIQAQTSWGSTFDATSHFFSSTWES--------IATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMD--LMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLPKTELVGIGKR--PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEVRFVGEGGRGGGREVSLLREEGGVTGCELRWAGNLK 511
            ++LL  L C+ A+ +   T+      F +T ES        ++ ++G    C F    S   R  +   +  QDRA++++   +  WE      KD H PLV+A TGPTG GKTET+ +IA  +  +   +   ++  P GL+V RGEDF+D + N VT Y + IKS L +HL KC G AVV+FDEVQKV+P TLD L  A+S +  LTYYK  +    +VD S+V F LISDIG  +M  ++I +  S   LP   L   VK ALDAQW RL+FGK+I +++PFLP  Q  + ++++LKL  +G  + G+ W +L+   G+ ++L     + Y                 +A  A  S++G   K+ ++V                            FA++GAR++++ GP+  L+S ++  ++PW     + V +   T+E  +  C +E   V +G                  GC ++W G  K
Sbjct:    8 IALLCMLACV-ARAAEEETWKEKLSSFQATVESSLAEGVEWLSFHSGLGPQCDFVEHPSVAVRSHLQKYLTGQDRALDSVVGAIESWEFSRTSSKD-HGPLVMAITGPTGTGKTETSTLIAEGLFRRRRKLEHSEKLVPTGLLVFRGEDFSDNYTNPVTQYQEQIKSRLVEHLTKCSGKAVVVFDEVQKVIPQTLDVLTSAMSSNAQLTYYK--NGVARKVDCSNVIFILISDIGVGNMENIMIQY-KSRDELPFAELENAVKKALDAQWDRLQFGKMIKQVIPFLPFEQRHIIDVINLKLRHLGANYEGKYWYKLDIEPGIAQHLSTLESIPY-----------------QARRA--SVKG---KELQKV----------------------------FAKYGARSVES-GPIQQLKSKLLRYLRPWNTKATITVSFVPSTEEVVITSCSSEAEDVDDGFAS--------------VGCRIKWQGKFK 426          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: XP_008614048.1 (hypothetical protein SDRG_09870 [Saprolegnia diclina VS20] >XP_008614049.1 hypothetical protein, variant 1 [Saprolegnia diclina VS20] >XP_008614050.1 hypothetical protein, variant 2 [Saprolegnia diclina VS20] >EQC32547.1 hypothetical protein SDRG_09870 [Saprolegnia diclina VS20] >EQC32548.1 hypothetical protein, variant 1 [Saprolegnia diclina VS20] >EQC32549.1 hypothetical protein, variant 2 [Saprolegnia diclina VS20])

HSP 1 Score: 238.8 bits (608), Expect = 3.700e-59
Identity = 161/487 (33.06%), Postives = 242/487 (49.69%), Query Frame = 0
Query:   36 SLLTSLPCIQAQTSWGSTFDATSHFFSSTWESIA---TYTGFHD----FCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMD--LMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLPKTELVGIGKR--PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEVRFVGEGGRGGGREVSLLREEGGVTGCELRWAGNLK 511
            +LL  L CI       +  D  S F ++   S+A    + GFH      C F    S   R  +   +  QDR++++I   +  WE      KD H PLV+A TGPTG GKTET+ +IA  +  +   +   ++  P GL+V RGEDF+D + N VT Y + IKS L +HL KC G AVV+FDEVQKV+P TLD L  A+S +  LTYYK  +    +VD S+V F LISDIG  +M  ++I +  S   LP   L   VK ALDAQW RL+FGK+I +++PFLP  Q  + ++++LKL  +   + G+ W +L+   G+ ++L     + Y                 +A  A  S+ G   K+ ++V                            FA++GAR++++ GP+  L+S ++  ++PW     + V +   T+E  +  C +E   V               +E    GC ++W G  K
Sbjct:    9 ALLCMLACIALAAEKETWKDKLSFFQATVESSLAEGVEWLGFHSGLGPQCDFVEHPSVAVRSHLQKYLTGQDRSLDSIVGAIESWEFSRTSSKD-HGPLVMAITGPTGTGKTETSTLIAEGLFRRRRKLDHSEKLVPTGLLVFRGEDFSDNYTNPVTQYQEQIKSRLVEHLTKCSGKAVVVFDEVQKVIPQTLDVLTSAMSSNAQLTYYK--NGVARKVDCSNVIFILISDIGVGNMENIMIQY-ESRDELPFGELENEVKKALDAQWDRLQFGKMIKQVIPFLPFEQRHIIDVINLKLRHLSVNYEGKYWYKLDIEPGIAQHLSTLESIPY-----------------QARRA--SVNG---KELQKV----------------------------FAKYGARSVES-GPIQQLKSKLLRYLRPWNTKATITVSFVPSTEEVVITSCSSEAEDVD--------------DEFASVGCRIKWQGKFK 426          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: XP_024586525.1 (26s protease regulatory subunit 6a [Plasmopara halstedii] >CEG50156.1 26s protease regulatory subunit 6a [Plasmopara halstedii])

HSP 1 Score: 235.3 bits (599), Expect = 4.100e-58
Identity = 141/415 (33.98%), Postives = 215/415 (51.81%), Query Frame = 0
Query:   65 WESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDLMKDVHR-PLVLAFTGPTGVGKTETAHVIARAMLPKTELVGIGKR--PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEV 476
            WE++  +TG    C F    S+V R+ +   ++ Q+RAV A+   +  WE        R PLVLA TGPTG GKTE +++IA A+  + + +   +R  P GL++ RGEDF+D   N +T Y   IK+ L +HLI C G AVV+ DEVQKV+P TLD   EA+SE   L+YYK        +DT++V F L+SDIG  +M  ++I +  +   +P   L + VK ALD QW RL FGK+ID+++PFLP     + EI+ LKL ++ E +RG+ W RL   + + +Y+ +   V Y                        ++  G  K +K                              FA++GAR+++T GP+  L+S ++  ++P+ P   + +  +  T E  +  C  EV
Sbjct:   47 WETVMYHTGLSYQCTFVDKPSQVVRQHLQENLKGQERAVEAVVGAIEAWEFSQSSTKDRAPLVLAITGPTGTGKTEMSNLIAEALFKRKKKLPNSERRVPTGLLMFRGEDFSDNFTNPITEYHTQIKTRLAEHLIHCSGKAVVVIDEVQKVIPHTLDVFMEAVSESSQLSYYK--HGVTKNIDTANVIFVLVSDIGVGEMEQVMIQY-DTRDEIPTVQLERVVKSALDNQWKRLDFGKMIDQVIPFLPFEHQHIVEIIALKLRQLDENYRGKYWHRLWIEDHIADYMSRLDSVHY--------------------KVRSAVVNGKIKSSKV-----------------------------FAKYGARDVET-GPIQLLKSKLLRYLRPFNPDAEIRISQDVDTKEISIVSCAMEV 408          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: ETI56283.1 (hypothetical protein F443_01130 [Phytophthora parasitica P1569] >ETM55781.1 hypothetical protein L914_01060 [Phytophthora parasitica])

HSP 1 Score: 229.2 bits (583), Expect = 2.900e-56
Identity = 144/451 (31.93%), Postives = 223/451 (49.45%), Query Frame = 0
Query:   65 WESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDLMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLP-KTELVGIGKR-PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEVRFVGEGGRGGGRE--VSLLREEGGVTGCELRWAGNLK 511
            WE+   ++G    C F    S++    +   ++ Q+RAV A+   +  WE         PLVLA TGPTG GKTE +++IA A+   K +L    KR P GL++ RGEDF+D   N +T Y   IK+ L +HL  C G AVV+ DEVQKV+P TLD L EA+SE    +YYK        +DT++V F L+SDIG  +M  ++I +  +   +P   L + VK ALD QW RL FGK+ID+++PFLP     + EI+ LKL ++ E +RG+ W RL   + + +Y+ +   V Y                        ++  G  K +K                              FA++GAR+++T GP+  L+S ++  ++P+ P   + +  +  T E  +  C  E     +  +   R    + + +E    GC  +W+G  +
Sbjct:   33 WEAAMYHSGLGYQCTFVDKPSQMVLHHLQENLKGQERAVEAVVGAIEAWEFSSSTKDRAPLVLAITGPTGTGKTEMSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRLAEHLHHCSGKAVVVIDEVQKVIPHTLDVLMEAVSESSQFSYYK--HGVTKNIDTANVIFVLVSDIGVGEMEQVMIQY-DTRDEIPTVQLERVVKSALDDQWKRLDFGKMIDQVIPFLPFEHQHIVEIIALKLRQLDENYRGKYWHRLWIEDNIADYMSRLDSVHY--------------------KVRSAVVNGKVKSSKV-----------------------------FAKYGARDVET-GPIQLLKSKLLRYLRPFNPDAEIRISQDVDTKEISIVSCAKEEAKQKKSTKSKQRSHTAADIDDEFVSIGCVTKWSGRFE 430          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: ETO85026.1 (hypothetical protein F444_01137 [Phytophthora parasitica P1976] >ETP54108.1 hypothetical protein F442_01077 [Phytophthora parasitica P10297])

HSP 1 Score: 228.0 bits (580), Expect = 6.600e-56
Identity = 145/453 (32.01%), Postives = 222/453 (49.01%), Query Frame = 0
Query:   65 WESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDLMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLP-KTELVGIGKR-PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTE----VRFVGEGGRGGGREVSLLREEGGVTGCELRWAGNLK 511
            WE+   ++G    C F    S++    +   ++ Q+RAV A+   +  WE         PLVLA TGPTG GKTE +++IA A+   K +L    KR P GL++ RGEDF+D   N +T Y   IK+ L +HL  C G AVV+ DEVQKV+P TLD L EA+SE    +YYK        +DT++V F L+SDIG  +M  ++I +  +   +P   L + VK ALD QW RL FGK+ID+++PFLP     + EI+ LKL ++ E +RG+ W RL   + + +Y+ +   V Y                        ++  G  K +K                              FA++GAR+++T GP+  L+S ++  ++P+ P   + +  +  T E  +  C  E     R   +       +V    +E    GC  +W+G  +
Sbjct:   33 WEAAMYHSGLGYQCTFVDKPSQMVLHHLQENLKGQERAVEAVVGAIEAWEFSSSTKDRAPLVLAITGPTGTGKTEMSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRLAEHLHHCSGKAVVVIDEVQKVIPHTLDVLMEAVSESSQFSYYK--HGVTKNIDTANVIFVLVSDIGVGEMEQVMIQY-DTRDEIPTVQLERVVKSALDDQWKRLDFGKMIDQVIPFLPFEHQHIVEIIALKLRQLDENYRGKYWHRLWIEDNIADYMSRLDSVHY--------------------KVRSAVVNGKVKSSKV-----------------------------FAKYGARDVET-GPIQLLKSKLLRYLRPFNPDAEIRISQDVDTKEISIVSCAKEEAKQKRAKSKQRSHTAADVEDSDDEFVSIGCVTKWSGRFE 432          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: ETM02537.1 (hypothetical protein L917_01022 [Phytophthora parasitica])

HSP 1 Score: 227.6 bits (579), Expect = 8.600e-56
Identity = 145/453 (32.01%), Postives = 222/453 (49.01%), Query Frame = 0
Query:   65 WESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDLMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLP-KTELVGIGKR-PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTE----VRFVGEGGRGGGREVSLLREEGGVTGCELRWAGNLK 511
            WE+   ++G    C F    S++    +   ++ Q+RAV A+   +  WE         PLVLA TGPTG GKTE +++IA A+   K +L    KR P GL++ RGEDF+D   N +T Y   IK+ L +HL  C G AVV+ DEVQKV+P TLD L EA+SE    +YYK        +DT++V F L+SDIG  +M  ++I +  +   +P   L + VK ALD QW RL FGK+ID+++PFLP     + EI+ LKL ++ E +RG+ W RL   + + +Y+ +   V Y                        ++  G  K +K                              FA++GAR+++T GP+  L+S ++  ++P+ P   + +  +  T E  +  C  E     R   +       +V    +E    GC  +W+G  +
Sbjct:   33 WEAAMYHSGLGYQCTFVDKPSQMVLHHLQENLKGQERAVEAVMGAIEAWEFSSSTKDRAPLVLAITGPTGTGKTEMSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRLAEHLHHCSGKAVVVIDEVQKVIPHTLDVLMEAVSESSQFSYYK--HGVTKNIDTANVIFVLVSDIGVGEMEQVMIQY-DTRDEIPTVQLERVVKSALDDQWKRLDFGKMIDQVIPFLPFEHQHIVEIIALKLRQLDENYRGKYWHRLWIEDNIADYMSRLDSVHY--------------------KVRSAVVNGKVKSSKV-----------------------------FAKYGARDVET-GPIQLLKSKLLRYLRPFNPDAEIRISQDVDTKEISIVSCAKEEAKQKRAKSKQRSHTAADVEDSDDEFVSIGCVTKWSGRFE 432          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: ETK96103.1 (hypothetical protein L915_01068 [Phytophthora parasitica] >ETL49478.1 hypothetical protein L916_01050 [Phytophthora parasitica] >ETP26084.1 hypothetical protein F441_01104 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 227.3 bits (578), Expect = 1.100e-55
Identity = 144/451 (31.93%), Postives = 222/451 (49.22%), Query Frame = 0
Query:   65 WESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDLMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLP-KTELVGIGKR-PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEVRFVGEGGRGGGRE--VSLLREEGGVTGCELRWAGNLK 511
            WE+   ++G    C F    S++    +   ++ Q+RAV A+   +  WE         PLVLA TGPTG GKTE +++IA A+   K +L    KR P GL++ RGEDF+D   N +T Y   IK+ L +HL  C G AVV+ DEVQKV+P TLD L EA+SE    +YYK        +DT++V F L+SDIG  +M  ++I +  +   +P   L + VK ALD QW RL FGK+ID+++PFLP     + EI+ LKL ++ E +RG+ W RL   + + +Y+ +   V Y                        ++  G  K +K                              FA++GAR+++T GP+  L+S ++  ++P+ P   + +  +  T E  +  C  E     +  +   R    + + +E    GC  +W G  +
Sbjct:   33 WEAAMYHSGLGYQCTFVDKPSQMVLHHLQENLKGQERAVEAVVGAIEAWEFSSSTKDRAPLVLAITGPTGTGKTEMSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRLAEHLHHCSGKAVVVIDEVQKVIPHTLDVLMEAVSESSQFSYYK--HGVTKNIDTANVIFVLVSDIGVGEMEQVMIQY-DTRDEIPTVQLERVVKSALDDQWKRLDFGKMIDQVIPFLPFEHQHIVEIIALKLRQLDENYRGKYWHRLWIEDNIADYMSRLDSVHY--------------------KVRSAVVNGKVKSSKV-----------------------------FAKYGARDVET-GPIQLLKSKLLRYLRPFNPDAEIRISQDVDTKEISIVSCAKEEAKQKKRTKSKQRSHTAADIDDEFVSIGCVTKWFGRFE 430          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: OQR98995.1 (hypothetical protein ACHHYP_20326 [Achlya hypogyna])

HSP 1 Score: 227.3 bits (578), Expect = 1.100e-55
Identity = 144/414 (34.78%), Postives = 219/414 (52.90%), Query Frame = 0
Query:   66 ESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMD--LMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLPKTELVGIGKR--PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTE 475
            E ++ ++G    C F    S   R  +   +  QDRAV+++ + +  WE      KD H PLVLA TGPTG GKT T+ ++A  +  +   +    +  P GL+V RGEDF+D + N VT Y + IKS L  HL KC G AVV+FDEVQKV+P TLD L  A+S +  LTYYK  +    +VD S+V F LISDIG  +M +++I +  S   LP   L   VK ALDAQW RL+FGK+I +++PFLP  Q  + +I++LKL ++  +++G+ W +L+   G+ ++L     + Y                 +A  A  +I G   K  ++V                            FA++GAR+++T GP+  L+S ++  ++PW     + V +   T+E  +  C  +
Sbjct:   66 EWLSFHSGLGPQCEFVDHPSVAVRAHLQKHLIAQDRAVDSVVAAIESWEFSRTSSKD-HGPLVLAITGPTGTGKTATSSLVAEGLFRRQRKLEHSDKVVPTGLLVFRGEDFSDNYTNPVTQYQEQIKSRLVDHLSKCSGKAVVVFDEVQKVIPQTLDVLTSAMSHNAQLTYYK--NGVARKVDCSNVIFVLISDIGVGNMESIMIQY-KSREELPFAELENEVKKALDAQWDRLQFGKMIKQVIPFLPFEQRHIIDIINLKLRDLSHDYKGKYWNQLDIEPGIAKHLSCLESIPY-----------------QARRA--TIDG---KDHQKV----------------------------FAKYGARSVET-GPIQQLKSKLLRYLRPWNTKANIAVSFLPGTEEVVITSCSAD 424          
BLAST of NO12G03450 vs. NCBI_GenBank
Match: XP_008864299.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW06224.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 224.9 bits (572), Expect = 5.600e-55
Identity = 149/457 (32.60%), Postives = 224/457 (49.02%), Query Frame = 0
Query:   62 SSTWESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQDRAVNAITSGLSHWEMDL--MKDVHRPLVLAFTGPTGVGKTETAHVIARAMLPKTELVGIGKR--PRGLMVLRGEDFADVHAN-VTSYIDTIKSALFQHLIKCQGHAVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFFLISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLIDKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKSPFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEXXXXXXXXXXXXXXXXXXXXXXXVYWFAEFGARNLQTGGPLHALESAIVESMKPWRPLEVLDVRYNAQTDETELRWCPTEVRFVGE------GGRGGGREVSLLREEGGVTGCELRWAG 508
            S+ WE +   +GF + C F    S   R+ + + ++ QD A++AI + +  WE      KD H PLVLA TGPTG GKTET+H++A A+   T+ +    +  P GL+V RGEDF+D + N VT Y + IKS L +HL +C G A+V+FDEVQKV+P TLD L  A+S +  L YY+  +    RVDTS+V F LISDIG   M  LLI +      +P   L   V+ ALDAQW RL+FGK++ ++VPFLP     + +++  KL+++   + G  W  L    G+  +L                                +++  +  + + +                            FA++GARN+++ GP+  L++ ++   +PW P     VR  A +   ++  C  E R  G+       G G   +V  L        C  RW G
Sbjct:   75 STGWEWLGYVSGFGEQCSFVNQPSSAVRKHLTTHLKAQDHAIHAIVAAIEAWEFSRTNAKD-HAPLVLAITGPTGTGKTETSHLLAEALFKWTKRLDHSDKVTPSGLLVFRGEDFSDNYTNPVTQYQEQIKSRLTEHLYRCSGKALVVFDEVQKVIPHTLDVLTTAMSSNAHLMYYR--NGGERRVDTSNVIFVLISDIGVAKMEQLLIQY-KHRRDVPVTKLENDVRRALDAQWARLQFGKMVRQVVPFLPFEPHHIVQVIQAKLDQLSRHYEGVYWKSLAFDSGLAAHL-------------------------------STLESMLYMERRAIVHDVEVRKV-------------------FAKYGARNVES-GPMQQLKAKLMRHARPWNPEAQFTVRLLADSRTIDIVSC-VEERTTGQLPDTTTMGDGSAADVITL-------ACVSRWQG 468          
The following BLAST results are available for this feature:
BLAST of NO12G03450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25698.12.100e-18768.88atp-dependent protease [Nannochloropsis gaditana][more]
XP_012196380.11.700e-5932.72hypothetical protein SPRG_02414 [Saprolegnia paras... [more]
XP_008614048.13.700e-5933.06hypothetical protein SDRG_09870 [Saprolegnia dicli... [more]
XP_024586525.14.100e-5833.9826s protease regulatory subunit 6a [Plasmopara hal... [more]
ETI56283.12.900e-5631.93hypothetical protein F443_01130 [Phytophthora para... [more]
ETO85026.16.600e-5632.01hypothetical protein F444_01137 [Phytophthora para... [more]
ETM02537.18.600e-5632.01hypothetical protein L917_01022 [Phytophthora para... [more]
ETK96103.11.100e-5531.93hypothetical protein L915_01068 [Phytophthora para... [more]
OQR98995.11.100e-5534.78hypothetical protein ACHHYP_20326 [Achlya hypogyna... [more]
XP_008864299.15.600e-5532.60hypothetical protein, variant 1 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010308NSK010308Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03450.1NO12G03450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|529270gene_5518Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100222g7gene4816Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03450.1NO12G03450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03450 ID=NO12G03450|Name=NO12G03450|organism=Nannochloropsis oceanica|type=gene|length=2256bp
AACCTACAGCATTGTAAGGAAACGTAGAACGCGAAAAAGGTAGGCAACCT
TGCGGGCAGTCAGGGGCTGGTTTCAGgtacgtgcagccaaggacacgctt
ccgttttgttcccttcatgagcctgcctcgcccaatgccgcgaccaattt
actaacgtcaacctcgacacattctatgtacatacatacagCCACACCAA
CACAATGAGAAGAAGACCGCCATTATCAGCACCAGTGGCGGTATCGACAT
CCGTGCCGCCGCTTCCCGAACTCCGGTTCCTTCCCATTCTCCTCTTCGCC
CTTCTTCTTAGCCTCCTCACCTCACTCCCCTGCATACAAGCCCAAACCTC
GTGGGGCTCCACCTTCGATGCGACCAGCCATTTCTTCTCCTCCACCTGGG
AAAGCATCGCAACATACACCGGATTCCACGATTTCTGTCCATTCGCCACC
GACTTTTCCGAGGTGGCCCGTCGGGCAGTACACTCCAAAATCCGTTGTCA
AGACCGAGCGGTGAATGCCATTACATCCGGCCTCAGTCACTGGGAGATGG
ACTTGATGAAGGATGTGCACCGGCCCCTTGTATTGGCCTTCACGGGGCCC
ACGGGCGTGGGGAAGACCGAGACCGCCCATGTGATTGCCAGGGCGATGTT
GCCCAAGACAGAATTGGTCGGGATAGGGAAACGACCTAGGGGCTTAATGG
TGTTGCGAGGGGAGGATTTTGCGGATGTGCATGCCAATGTCACCAGgtag
gtaagattgaaagtggaaaaaggatgagagctgaggtggttgaaaccttt
gtcctggtgcctgcgtcgagtgcgtcgtggtcgtcatggtcctgttcaat
cctccctccctccctccctcccttcctacctctttcacgtacagCTACAT
AGACACCATCAAAAGCGCACTCTTCCAGCACTTAATTAAATGCCAAGGCC
ACGCCGTCGTCATCTTTGACGAAGTCCAGAAAGgtacccccccccccttc
cttgccccctccctcccctcctccttccctccacgcttacgatgcctcct
cccttcctccttcttcccctccccccttccttgccccctccctcccctcc
cgaccttttaacagTGGTCCCAGGCACGCTGGATGCCCTCGCCGAAGCCA
TCAGCGAACATCCGACCCTCACGTACTACAAGCCCGAAGATGCGACCATC
CACCGGGTGGATACTTCCCACGTGGCCTTTTTCCTCATCAGTGACATTGG
ATGGGAAGACATGCTCACCCTCCTCATCGCCCACGGCGGGTCCGCCGCTG
CCCTCCCTCCCCATCTACTGTCCCAGCGGGTCAAGGTCGCGCTGGATGCC
CAGTGGACACGGCTCAAGTTTGGGAAATTAATCGATAAGATAGTCCCCTT
CTTACCGCTTTCCCAGGCTCAAATGCGAGAGATACTAGACTTGAAATTGG
AAGAGATGGGCGAGGAACACCGGGGGAGGCTGTGGGCGCGGCTAGAGACG
ACGGAGGGAGTGAGGGAGTACTTGGTGAAGAGTCCTTTTGTCAAGTATGC
AGGGTATGGGTTTGAGGACGAGGAGGAGGGAGGGATGGAGGAAGGGGAGG
AAGCGGGTAATGCATGCGATTCAATCCAAGGAGGCATGTGCAAACAAGCC
AAGGAAGTAGCAGAAGACAACGACGAAGAAGTAGGAGAAGAGAAGAGGAA
GAGGAAAGAGAAGAAGAGAAGGAAGGAGAAGGAAGTGTATTGGTTCGCGG
AATTCGGTGCCCGGAATCTTCAGACTGGCGGGCCGTTGCACGCCCTGGAG
AGCGCGATTGTAGAAAGCATGAAACCGTGGCGTCCTTTGGAAGTATTGGA
CGTCAGGTACAACGCGCAGACGGATGAGACTGAATTGAGGTGGTGCCCGA
CCGAGGTGCGCTTCGTGGGTGAAGGTGGCAGGGGGGGAGGGAGGGAGGTG
TCGTTGTTGAGGGAGGAGGGGGGGGTGACGGGCTGTGAGCTGAGATGGGC
GGGGAACTTGAAGACGAAGATAGGGTGAAGAGAGAAGGTGGTGGTGGTGG
TGGTGGATTGGATGAGGAAAAGGCCGTGTGTACAGTGATGGGAGGACAAC
GAAAGTAAATGAATGGGAAGGCAGACTATAGCTGCTGCTGCTTCTGTTGT
TGGTGTTGCAGCAGCACATGTATTTTGATAACGCGTAGCCTCTGAGTAGA
GAAAAGGAAATTGAAATTAGGATACTCAGAAAATAGAAAAATAAGCCAAT
AAAATC
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protein sequence of NO12G03450.1

>NO12G03450.1-protein ID=NO12G03450.1-protein|Name=NO12G03450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bp
MRRRPPLSAPVAVSTSVPPLPELRFLPILLFALLLSLLTSLPCIQAQTSW
GSTFDATSHFFSSTWESIATYTGFHDFCPFATDFSEVARRAVHSKIRCQD
RAVNAITSGLSHWEMDLMKDVHRPLVLAFTGPTGVGKTETAHVIARAMLP
KTELVGIGKRPRGLMVLRGEDFADVHANVTSYIDTIKSALFQHLIKCQGH
AVVIFDEVQKVVPGTLDALAEAISEHPTLTYYKPEDATIHRVDTSHVAFF
LISDIGWEDMLTLLIAHGGSAAALPPHLLSQRVKVALDAQWTRLKFGKLI
DKIVPFLPLSQAQMREILDLKLEEMGEEHRGRLWARLETTEGVREYLVKS
PFVKYAGYGFEDEEEGGMEEGEEAGNACDSIQGGMCKQAKEVAEDNDEEV
GEEKRKRKEKKRRKEKEVYWFAEFGARNLQTGGPLHALESAIVESMKPWR
PLEVLDVRYNAQTDETELRWCPTEVRFVGEGGRGGGREVSLLREEGGVTG
CELRWAGNLKTKIG*
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Synonyms
Publications