APM2, gene4753 (gene) Nannochloropsis gaditana

Overview
NameAPM2
Unique Namegene4753
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:677253..679632 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100168g4
Gene biotypeprotein_coding
GeneAPM2
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:677253..679632 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02710NO12G02710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4922rna4922-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4923rna4923-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4922rna4922Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4923rna4923Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4922

>rna4922-protein ID=rna4922-protein|Name=rna4922|organism=Nannochloropsis gaditana|type=polypeptide|length=452bp
MISAIFLVNQKGEVVVNRLYRDDVSRSMVDTFRHKVIASKETGSQAPIKV
IENATFLYIRHHHLYLVAVTRSNLNPALVFEFLFRMVRIFKAYFGEHFDE
SAVRNHFTLVYELLDETMDFGYPQNCAIEVLRQYINLGTVQAEMEQQEPT
VLTSQITGQIDWRRDGIRYRKNEVYIDVLESVNILMSATGNVLHSDVTGQ
IVMKALLSGWPECKFGLNDKLIMDREAAGKASGAVTRRSAGVEIDDCTFH
RCVRLGRFDADRTITFIPPDGEFELMRYRVTENVNLPFRLIPAIQEEGRN
RVAVNVKVTANFSSKLFGQNVVIKVPVPPNTAKTHINVSTGRARFEPEHR
ALVWRIKRFPGGCEFMITADVTLMPSTSNKAWSRPPIQVEFQVPMFTSSG
VHVRFLRVYDKSGYQTNRWVRYITRAGSFSVRHVVYTETLSCTCARSHVF
LS
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protein sequence of rna4923

>rna4923-protein ID=rna4923-protein|Name=rna4923|organism=Nannochloropsis gaditana|type=polypeptide|length=433bp
MISAIFLVNQKGEVVVNRLYRDDVSRSMVDTFRHKVIASKETGSQAPIKV
IENATFLYIRHHHLYLVAVTRSNLNPALVFEFLFRMVRIFKAYFGEHFDE
SAVRNHFTLVYELLDETMDFGYPQNCAIEVLRQYINLGTVQAEMEQQEPT
VLTSQITGQIDWRRDGIRYRKNEVYIDVLESVNILMSATGNVLHSDVTGQ
IVMKALLSGWPECKFGLNDKLIMDREAAGKASGAVTRRSAGVEIDDCTFH
RCVRLGRFDADRTITFIPPDGEFELMRYRVTENVNLPFRLIPAIQEEGRN
RVAVNVKVTANFSSKLFGQNVVIKVPVPPNTAKTHINVSTGRARFEPEHR
ALVWRIKRFPGGCEFMITADVTLMPSTSNKAWSRPPIQVEFQVPMFTSSG
VHVRFLRVYDKSGYQTNRWVRYITRAGSFSVRI
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Synonyms
Publications