UPM, gene4578 (gene) Nannochloropsis gaditana

Overview
NameUPM
Unique Namegene4578
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:230466..233159 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100695g1
Gene biotypeprotein_coding
GeneUPM
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:230466..233159 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00790NO12G00790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4741rna4741-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4741rna4741Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4741

>rna4741-protein ID=rna4741-protein|Name=rna4741|organism=Nannochloropsis gaditana|type=polypeptide|length=597bp
MKAKSKGSRATGLPSGNTPVHCRQPRGSTASHCARKPLQTIQCPARQVLV
LGLASRPFYGTGETPALGTPGFASSGVDDVFELIPRWLSRPHLWLHGQPC
ATCHALIFAFMLTMLVSTSQQLSGNPSPLHNTAPLPLLVIDLNMRRNDHL
CGVWRRRQMPCNVMTTSLVPLFPLLFALTHLSPGVAFVPATPSPFPCILS
STPHPLTIPTPRPVTSTAVSAFLNDDSRLGPSSLTPSPGPSPPQGRITLV
GAGPGDPDLLTLAAIRAMATADLVVADRLIPPEMLKLVTGNLKIAGKRPG
CADAAQKEIYQWVRDGMAARQHVVRLKIGDPFLFGRGGEEVLEFREKLGV
DPEIIPGVSSAFAAPLLAAIPVTHRGVSNQVYVCTGFGKGGDRPYLAPFY
ANQTAVFLMAVGRLRELTRQLTSVAGYPEETPVAIVEQASTPRQRTVVAT
LDKIAAVAERVRVTAPAVVVVGEVVRVLLEEGEDGEEGGRVIEGKAGRKG
CGDAMLAYIGGAMTDQEAALFGADGRGGGKEEGGIPSFFKRLRRARDETA
GRSEEVEEGAKEAIMARRGGGRRRTSRLRKWKFWVKAALGRVLKRAK
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Synonyms
Publications