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Properties
| Property Name | Value |
|---|
| Product | putative uroporphyrin-3 c-methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100695g1.10415.mrna |
| Orig protein id | gnl|cribi|Naga_100695g1.10415 |
| Gene | UPM |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:230466..233159 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4741 ID=rna4741|Name=rna4741|organism=Nannochloropsis gaditana|type=mRNA|length=888bp
ATGTTTGCCAGGATGCGCGGTGCTGACTGGCTGCCATTGTGTTTTTTCCT
GATTGGCCCCGTGCTTCGAACGCAGGCGTTTTCCTCCCCATGCTTGCCAT
GTCGGGACCCGACCTTCCCCTCCTCTCCGTCCCTCCCCTCCTTTTCCTCC
TTTTGCACCGTCTTTAGCCCTCCTCACGCCTTCGTCCGTCCTACGGCGTC
CTCGTCCATACAACCGTATCATCCACGGCACCAACGACCAACTTTGCAGC
CATGCGGTCATGGGATCTTCCCGTTTCTACCTCCATCTCGCCCACCGGCT
ACGTCCGCGCCACAGGGGTTGCCCCCCCTTCCTTCCTCCCCCTCCTCCAC
CTCCTCCTCCCACCCTCCCGTCCTCCTTCTCCACGGCTTCGATTCTTCCT
GTCTGGAGTACCGACGCCTCCATCCCCTCCTCTCTCCCTATTTGGACGCT
TATGCAGTAGATATGATGGGGTGGGGGTTCAGTCAACTCCGAGGGGTGCA
AGATTTCTCCGCAGAGGCCAAACGCGAATATTTGCACGCGTTCTGGGTGC
ACGTCCTCAAAGAACGCCCGATGGTCTTGGTGGGTGCCTCCTTGGGAGGT
GCGGCCGCCGTGGATTTTGCCCACACCTACCCGGAAGCCGTTAAAAAACT
GGTCTTGATCGACGCACAGGTCTACATCGACGGCGTGGGCCCCATGGCCT
CGTTCCCGCCTCCCCTCGCCGCGCTGGGCATCCGAGTCCTGCAGTCCAAA
GCCCTCCGGTCGTACGCAGGCACCCTCTCCTACCACGACGCGCCCTTGTA
TTCCACCCGCGACGCCATGCACATCGGGCGCTTGCACACCCACCGGGACG
GTTGGGACGAGGCCAGTGTCCGTTACATGCTGAGGTAA back to topprotein sequence of rna4741 >rna4741-protein ID=rna4741-protein|Name=rna4741|organism=Nannochloropsis gaditana|type=polypeptide|length=597bp
MKAKSKGSRATGLPSGNTPVHCRQPRGSTASHCARKPLQTIQCPARQVLV
LGLASRPFYGTGETPALGTPGFASSGVDDVFELIPRWLSRPHLWLHGQPC
ATCHALIFAFMLTMLVSTSQQLSGNPSPLHNTAPLPLLVIDLNMRRNDHL
CGVWRRRQMPCNVMTTSLVPLFPLLFALTHLSPGVAFVPATPSPFPCILS
STPHPLTIPTPRPVTSTAVSAFLNDDSRLGPSSLTPSPGPSPPQGRITLV
GAGPGDPDLLTLAAIRAMATADLVVADRLIPPEMLKLVTGNLKIAGKRPG
CADAAQKEIYQWVRDGMAARQHVVRLKIGDPFLFGRGGEEVLEFREKLGV
DPEIIPGVSSAFAAPLLAAIPVTHRGVSNQVYVCTGFGKGGDRPYLAPFY
ANQTAVFLMAVGRLRELTRQLTSVAGYPEETPVAIVEQASTPRQRTVVAT
LDKIAAVAERVRVTAPAVVVVGEVVRVLLEEGEDGEEGGRVIEGKAGRKG
CGDAMLAYIGGAMTDQEAALFGADGRGGGKEEGGIPSFFKRLRRARDETA
GRSEEVEEGAKEAIMARRGGGRRRTSRLRKWKFWVKAALGRVLKRAK back to topmRNA from alignment at CM002464.1:230466..233159- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4741 ID=rna4741|Name=rna4741|organism=Nannochloropsis gaditana|type=mRNA|length=2694bp|location=Sequence derived from alignment at CM002464.1:230466..233159- (Nannochloropsis gaditana)
TCGGGGATGGTTGGGAGAAATGTTTAGCCTCGTGCCCTTAATCGCACAAC
TTTTGCCCTGGTTCATGACCGGATGGCCCCACTGCCATTTCATTCCTGCC
ATGGGCACGCAGCAATCCCTTTCCCTGGTCTCATTCAGACTACGCGACGT
TTTCCTCCACGCTGCCTTTTTCCCGCTTTTTTGGTTTTTTTTGGGAGCTC
CTGCACGCAGGTCGCGAGACCGACCTCATGAAAGCCAAGTCAAAGGGCTC
GCGAGCCACTGGACTTCCTAGCGGCAATACTCCCGTCCACTGCCGACAAC
CACGGGGCAGCACAGCGTCTCATTGTGCTCGAAAGCCTCTTCAAACGATA
CAATGCCCAGCTCGTCAAGTATTGGTGCTTGGTCTGGCCTCGAGGCCTTT
TTACGGGACGGGGGAGACGCCGGCGCTTGGAACACCAGGGTTCGCCTCCT
CGGGAGTTGACGACGTGTTTGAGTTGATTCCACGATGGCTGAGTCGACCG
CATTTGTGGCTACATGGGCAGCCATGCGCTACATGTCATGCTCTGATATT
TGCGTTTATGTTGACAATGTTGGTCTCAACGTCCCAGCAGCTAAGTGGCA
ACCCTTCCCCTTTACACAACACAGCCCCCCTTCCCCTCCTAGTCATCGAC
CTAAACATGAGACGGAATGACCACCTCTGTGGCGTATGGAGAAGGAGGTA
AGTAATTTCTGAAAAAAAATGGACGCTTGCTTTCCCCGTCGTAGTGTTCA
AGCACTTCGCACAAGCCTGACGGCTTCGCGCAAGAGCGACGGTGCTTGGC
TACCCTCAGGTCCTTTCATGTTATGTATGTGTGTATGTGTGAAGAGCAGA
CGGATGGCCTGTCACTCGTGTGGCGTCCCGCGCGTTTCACACGTGCAGGC
CAGTGCCCCCCCAACTCCGGCCAGTCTGTATATATCCCCGTGCATCTGGG
CACGCTCTTTCACTAAAGATTACAGTTACATACACACGGTTTCCCCCCAC
AGACAAATGCCCTGCAATGTGATGACCACATCTCTGGTCCCTCTCTTCCC
CCTCCTCTTCGCCTTGACGCATCTCAGCCCCGGGGTCGCCTTTGTTCCTG
CCACGCCCTCCCCTTTCCCCTGCATCCTTTCCTCCACACCCCACCCTCTC
ACCATCCCGACCCCCCGCCCCGTAACCTCCACGGCCGTGTCCGCCTTCCT
GAATGACGACAGTCGCCTTGGCCCTTCCTCCCTCACACCTTCCCCCGGTC
CCTCCCCTCCCCAAGGCCGTATCACCCTCGTGGGCGCCGGTCCTGGGGAC
CCGGATTTGCTCACCCTAGCCGCCATCCGGGCGATGGCCACAGCGGATTT
GGTGGTCGCGGACCGACTCATTCCCCCCGAGATGTTGAAGTTGGTAACGG
GCAATTTGAAAATTGCGGGGAAAAGGCCGGGCTGTGCGGATGCGGCCCAG
AAGGAGATTTACCAGTGGGTGCGGGACGGGATGGCGGCGAGGCAACACGT
GGTTCGGTTGAAAATAGGAGACCCCTTTCTCTTCGGCCGGGGCGGGGAGG
AAGTCTTGGAGTTTCGAGAAAAATTGGGCGTGGACCCGGAAATCATACCC
GGAGTTTCCTCGGCGTTTGCGGCGCCGTTACTGGCGGCCATCCCAGTCAC
CCACCGGGGAGTATCGAACCAAGTGTACGTGTGTACGGGCTTCGGAAAAG
GAGGCGACCGGCCCTACCTCGCCCCTTTCTACGCGAACCAGACCGCGGTC
TTTTTGATGGCGGTGGGGAGGTTGCGGGAGCTGACGCGTCAACTGACCAG
CGTGGCAGGGTACCCGGAGGAGACGCCTGTGGCGATCGTCGAACAGGCCT
CGACCCCACGGCAGCGGACCGTGGTCGCCACTCTCGACAAGATCGCGGCG
GTGGCGGAGAGAGTAAGGGTGACGGCACCCGCCGTGGTGGTGGTGGGGGA
GGTGGTGCGTGTGTTGTTGGAGGAGGGGGAGGACGGGGAGGAGGGAGGGC
GGGTAATCGAGGGGAAGGCGGGCCGCAAGGGGTGTGGAGACGCGATGCTG
GCCTACATCGGGGGCGCAATGACGGACCAGGAGGCGGCCCTGTTCGGGGC
GGATGGACGAGGAGGAGGGAAGGAGGAGGGAGGGATTCCCTCTTTCTTCA
AGAGGCTCCGTCGGGCTAGGGACGAGACGGCCGGGCGGTCAGAAGAGGTC
GAGGAGGGCGCCAAGGAAGCGATCATGGCGCGAAGGGGCGGAGGGAGGAG
AAGGACGTCCAGGTTACGGAAGTGGAAGTTTTGGGTGAAAGCAGCGCTTG
GCCGAGTTTTGAAGAGAGCGAAGTGACGATTTTTGGTGAATGTGGCAGGG
GAGAGTTAACCGCGTCAGTGTAGGGAAAGGACATTGCGTGGCAGTATGAG
GATGGGCTTGCTTTGGGCGACTGCTTGGTGCCTGCTTGGTGCCCTTGAGA
GACTTCCGCACAAGCATATTAAGAATTAAAATGTCATGCGCGTGTCAACA
AGTCTCTCATGAACATCATGTATGATCAGGATTTTGGATACAGGACAGCA
CAGCACATTTTTGAATCCTTTGTTGTGTATATAAAATGACACTGGTTAAG
CAGGAACAAAACGATTTGGACGTATAGGGCGCTCAGCTTGTATATTTTGG
TGAAGGCATCAAGTAAAAAAGAACACTGACATTGAACGGAATGA back to topCoding sequence (CDS) from alignment at CM002464.1:230466..233159- >rna4741 ID=rna4741|Name=rna4741|organism=Nannochloropsis gaditana|type=CDS|length=3588bp|location=Sequence derived from alignment at CM002464.1:230466..233159- (Nannochloropsis gaditana)
ACAAATGCCCTGCAATGTGATGACCACATCTCTGGTCCCTCTCTTCCCCC
TCCTCTTCGCCTTGACGCATCTCAGCCCCGGGGTCGCCTTTGTTCCTGCC
ACGCCCTCCCCTTTCCCCTGCATCCTTTCCTCCACACCCCACCCTCTCAC
CATCCCGACCCCCCGCCCCGTAACCTCCACGGCCGTGTCCGCCTTCCTGA
ATGACGACAGTCGCCTTGGCCCTTCCTCCCTCACACCTTCCCCCGGTCCC
TCCCCTCCCCAAGGCCGTATCACCCTCGTGGGCGCCGGTCCTGGGGACCC
GGATTTGCTCACCCTAGCCGCCATCCGGGCGATGGCCACAGCGGATTTGG
TGGTCGCGGACCGACTCATTCCCCCCGAGATGTTGAAGTTGGTAACGGGC
AATTTGAAAATTGCGGGGAAAAGGCCGGGCTGTGCGGATGCGGCCCAGAA
GGAGATTTACCAGTGGGTGCGGGACGGGATGGCGGCGAGGCAACACGTGG
TTCGGTTGAAAATAGGAGACCCCTTTCTCTTCGGCCGGGGCGGGGAGGAA
GTCTTGGAGTTTCGAGAAAAATTGGGCGTGGACCCGGAAATCATACCCGG
AGTTTCCTCGGCGTTTGCGGCGCCGTTACTGGCGGCCATCCCAGTCACCC
ACCGGGGAGTATCGAACCAAGTGTACGTGTGTACGGGCTTCGGAAAAGGA
GGCGACCGGCCCTACCTCGCCCCTTTCTACGCGAACCAGACCGCGGTCTT
TTTGATGGCGGTGGGGAGGTTGCGGGAGCTGACGCGTCAACTGACCAGCG
TGGCAGGGTACCCGGAGGAGACGCCTGTGGCGATCGTCGAACAGGCCTCG
ACCCCACGGCAGCGGACCGTGGTCGCCACTCTCGACAAGATCGCGGCGGT
GGCGGAGAGAGTAAGGGTGACGGCACCCGCCGTGGTGGTGGTGGGGGAGG
TGGTGCGTGTGTTGTTGGAGGAGGGGGAGGACGGGGAGGAGGGAGGGCGG
GTAATCGAGGGGAAGGCGGGCCGCAAGGGGTGTGGAGACGCGATGCTGGC
CTACATCGGGGGCGCAATGACGGACCAGGAGGCGGCCCTGTTCGGGGCGG
ATGGACGAGGAGGAGGGAAGGAGGAGGGAGGGATTCCCTCTTTCTTCAAG
AGGCTCCGTCGGGCTAGGGACGAGACGGCCGGGCGGTCAGAAGAGGTCGA
GGAGGGCGCCAAGGAAGCGATCATGGCGCGAAGGGGCGGAGGGAGGAGAA
GGACGTCCAGGTTACGGAAGTGGAAGTTTTGGGTGAAAGCAGCGCTTGGC
CGAGTTTTGAAGAGAGCGAAGTGAATGAAAGCCAAGTCAAAGGGCTCGCG
AGCCACTGGACTTCCTAGCGGCAATACTCCCGTCCACTGCCGACAACCAC
GGGGCAGCACAGCGTCTCATTGTGCTCGAAAGCCTCTTCAAACGATACAA
TGCCCAGCTCGTCAAGTATTGGTGCTTGGTCTGGCCTCGAGGCCTTTTTA
CGGGACGGGGGAGACGCCGGCGCTTGGAACACCAGGGTTCGCCTCCTCGG
GAGTTGACGACGTGTTTGAGTTGATTCCACGATGGCTGAGTCGACCGCAT
TTGTGGCTACATGGGCAGCCATGCGCTACATGTCATGCTCTGATATTTGC
GTTTATGTTGACAATGTTGGTCTCAACGTCCCAGCAGCTAAGTGGCAACC
CTTCCCCTTTACACAACACAGCCCCCCTTCCCCTCCTAGTCATCGACCTA
AACATGAGACGGAATGACCACCTCTGTGGCGTATGGAGAAGGAGACAAAT
GCCCTGCAATGTGATGACCACATCTCTGGTCCCTCTCTTCCCCCTCCTCT
TCGCCTTGACGCATCTCAGCCCCGGGGTCGCCTTTGTTCCTGCCACGCCC
TCCCCTTTCCCCTGCATCCTTTCCTCCACACCCCACCCTCTCACCATCCC
GACCCCCCGCCCCGTAACCTCCACGGCCGTGTCCGCCTTCCTGAATGACG
ACAGTCGCCTTGGCCCTTCCTCCCTCACACCTTCCCCCGGTCCCTCCCCT
CCCCAAGGCCGTATCACCCTCGTGGGCGCCGGTCCTGGGGACCCGGATTT
GCTCACCCTAGCCGCCATCCGGGCGATGGCCACAGCGGATTTGGTGGTCG
CGGACCGACTCATTCCCCCCGAGATGTTGAAGTTGGTAACGGGCAATTTG
AAAATTGCGGGGAAAAGGCCGGGCTGTGCGGATGCGGCCCAGAAGGAGAT
TTACCAGTGGGTGCGGGACGGGATGGCGGCGAGGCAACACGTGGTTCGGT
TGAAAATAGGAGACCCCTTTCTCTTCGGCCGGGGCGGGGAGGAAGTCTTG
GAGTTTCGAGAAAAATTGGGCGTGGACCCGGAAATCATACCCGGAGTTTC
CTCGGCGTTTGCGGCGCCGTTACTGGCGGCCATCCCAGTCACCCACCGGG
GAGTATCGAACCAAGTGTACGTGTGTACGGGCTTCGGAAAAGGAGGCGAC
CGGCCCTACCTCGCCCCTTTCTACGCGAACCAGACCGCGGTCTTTTTGAT
GGCGGTGGGGAGGTTGCGGGAGCTGACGCGTCAACTGACCAGCGTGGCAG
GGTACCCGGAGGAGACGCCTGTGGCGATCGTCGAACAGGCCTCGACCCCA
CGGCAGCGGACCGTGGTCGCCACTCTCGACAAGATCGCGGCGGTGGCGGA
GAGAGTAAGGGTGACGGCACCCGCCGTGGTGGTGGTGGGGGAGGTGGTGC
GTGTGTTGTTGGAGGAGGGGGAGGACGGGGAGGAGGGAGGGCGGGTAATC
GAGGGGAAGGCGGGCCGCAAGGGGTGTGGAGACGCGATGCTGGCCTACAT
CGGGGGCGCAATGACGGACCAGGAGGCGGCCCTGTTCGGGGCGGATGGAC
GAGGAGGAGGGAAGGAGGAGGGAGGGATTCCCTCTTTCTTCAAGAGGCTC
CGTCGGGCTAGGGACGAGACGGCCGGGCGGTCAGAAGAGGTCGAGGAGGG
CGCCAAGGAAGCGATCATGGCGCGAAGGGGCGGAGGGAGGAGAAGGACGT
CCAGGTTACGGAAGTGGAAGTTTTGGGTGAAAGCAGCGCTTGGCCGAGTT
TTGAAGAGAGCGAAGTGAATGAAAGCCAAGTCAAAGGGCTCGCGAGCCAC
TGGACTTCCTAGCGGCAATACTCCCGTCCACTGCCGACAACCACGGGGCA
GCACAGCGTCTCATTGTGCTCGAAAGCCTCTTCAAACGATACAATGCCCA
GCTCGTCAAGTATTGGTGCTTGGTCTGGCCTCGAGGCCTTTTTACGGGAC
GGGGGAGACGCCGGCGCTTGGAACACCAGGGTTCGCCTCCTCGGGAGTTG
ACGACGTGTTTGAGTTGATTCCACGATGGCTGAGTCGACCGCATTTGTGG
CTACATGGGCAGCCATGCGCTACATGTCATGCTCTGATATTTGCGTTTAT
GTTGACAATGTTGGTCTCAACGTCCCAGCAGCTAAGTGGCAACCCTTCCC
CTTTACACAACACAGCCCCCCTTCCCCTCCTAGTCATCGACCTAAACATG
AGACGGAATGACCACCTCTGTGGCGTATGGAGAAGGAG back to top
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