NO12G00790, NO12G00790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_005856041.1 (uroporphyrinogen 3 C-methyltransferase [Nannochloropsis gaditana CCMP526] >EKU20334.1 uroporphyrinogen 3 C-methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 391.3 bits (1004), Expect = 3.400e-105 Identity = 205/280 (73.21%), Postives = 232/280 (82.86%), Query Frame = 0 Query: 119 LQAFRNDSSSFGPSSLSPSFSPT-GKGEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE-----EEGGRRRWRERGG 393 + AF ND S FGPSSL+PS P+ +G ITLVGAGPGDPDLLTLAAIRA++TAD+VVADRLIPPEML LVTG LKIAGKRPGCA+ AQ+EIY+WV +G+ +HVVRLKIGDPFLFGRGGEEVL++R+ LGV+P +IPGVSSA AAPLL +IPVTHRGV+NQVY+CTGFGK GDRPYLAP+ NQTAVFLMAVGRL EL+ QL AGYP TPVAIVEQASTPRQRTVV + IA AE+V V APAV+VVGEVVRVLLE EEGGR + GG Sbjct: 86 VSAFLNDDSRFGPSSLTPSPGPSPPQGRITLVGAGPGDPDLLTLAAIRAMATADLVVADRLIPPEMLKLVTGNLKIAGKRPGCADAAQKEIYQWVRDGMAARQHVVRLKIGDPFLFGRGGEEVLEFREKLGVDPEIIPGVSSAFAAPLLAAIPVTHRGVSNQVYVCTGFGKGGDRPYLAPFYVNQTAVFLMAVGRLRELTRQLTSVAGYPEETPVAIVEQASTPRQRTVVATLDKIAAVAERVRVTAPAVVVVGEVVRVLLEEGEDGEEGGRVIEGKAGG 365
BLAST of NO12G00790 vs. NCBI_GenBank
Match: EWM25943.1 (putative uroporphyrin-3 c-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 389.8 bits (1000), Expect = 1.000e-104 Identity = 202/272 (74.26%), Postives = 228/272 (83.82%), Query Frame = 0 Query: 119 LQAFRNDSSSFGPSSLSPSFSPT-GKGEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE-----EEGGR 385 + AF ND S GPSSL+PS P+ +G ITLVGAGPGDPDLLTLAAIRA++TAD+VVADRLIPPEML LVTG LKIAGKRPGCA+ AQ+EIY+WV +G+ +HVVRLKIGDPFLFGRGGEEVL++R+ LGV+P +IPGVSSA AAPLL +IPVTHRGV+NQVY+CTGFGK GDRPYLAP+ NQTAVFLMAVGRL EL+ QL AGYP TPVAIVEQASTPRQRTVV + IA AE+V V APAV+VVGEVVRVLLE EEGGR Sbjct: 219 VSAFLNDDSRLGPSSLTPSPGPSPPQGRITLVGAGPGDPDLLTLAAIRAMATADLVVADRLIPPEMLKLVTGNLKIAGKRPGCADAAQKEIYQWVRDGMAARQHVVRLKIGDPFLFGRGGEEVLEFREKLGVDPEIIPGVSSAFAAPLLAAIPVTHRGVSNQVYVCTGFGKGGDRPYLAPFYANQTAVFLMAVGRLRELTRQLTSVAGYPEETPVAIVEQASTPRQRTVVATLDKIAAVAERVRVTAPAVVVVGEVVRVLLEEGEDGEEGGR 490
BLAST of NO12G00790 vs. NCBI_GenBank
Match: CBN77740.1 (uroporphyrinogen-III C-methyltransferase, putative chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 289.3 bits (739), Expect = 1.800e-74 Identity = 148/240 (61.67%), Postives = 185/240 (77.08%), Query Frame = 0 Query: 144 GEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLEEEGG 384 G +LVG+GPGDPDLLT+A +R L +AD+V+ADRL+ E+L LV G L++A K PGCAE+AQ+EIYRW+ EG+ KHVVRLKIGDPF+FGRGGEEVL R+ LGVEP+++PG+SS +APLLG +PVTHRGVA QV + TG+G++ RP + Y+P +TAVFLMA+GRL EL LV+ + YP TPVAI+E ASTPRQR + G V TI+ A + VKAPA IVVGEVV VL E G Sbjct: 118 GTCSLVGSGPGDPDLLTVAGLRELQSADLVIADRLVSKEILGLVEGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPFIFGRGGEEVLVMRE-LGVEPKVVPGISSVFSAPLLGGVPVTHRGVATQVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCADLVRRS-YPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQG 355
BLAST of NO12G00790 vs. NCBI_GenBank
Match: OEU16305.1 (uroporphyrin-III C-m [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 287.3 bits (734), Expect = 7.000e-74 Identity = 148/257 (57.59%), Postives = 192/257 (74.71%), Query Frame = 0 Query: 126 SSSFGPSSLSPSFSPTGKGEITLVGAGPGDPDLLTLAAIRALSTAD-IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLEEE 382 S++ P S +P + G ITLVG+GPGDPDLLT+ A + L D ++++DRL+ E+L +V G +KIA K PGCAE AQ+EIY W EG+ KHV+RLKIGDPF+FGRGGEEV+++R GVE +++PGVSSA +APLL +IPVTHRGV+NQV +CTG+G+EG P L Y+ QT VFLMAVGRL +L ++LV AGYP TPV I+E+A P QRTVVG + TIA AEK ++AP+ IVVG+VV VLLE++ Sbjct: 89 SATLEPFSDTPKDALGNGGRITLVGSGPGDPDLLTVKAYKLLQDPDALIISDRLVSQEILDIVKGEIKIARKMPGCAEFAQEEIYFWTHEGLAAGKHVIRLKIGDPFVFGRGGEEVIQFR-KFGVESKVVPGVSSAFSAPLLANIPVTHRGVSNQVVMCTGYGREGTSPDLIQYHEEQTIVFLMAVGRLRQLCDRLVNLAGYPKDTPVGIIERAGCPNQRTVVGNMQTIADIAEKYNIQAPSTIVVGKVVDVLLEKD 344
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_005831076.1 (hypothetical protein GUITHDRAFT_87531 [Guillardia theta CCMP2712] >EKX44096.1 hypothetical protein GUITHDRAFT_87531 [Guillardia theta CCMP2712]) HSP 1 Score: 278.9 bits (712), Expect = 2.500e-71 Identity = 145/249 (58.23%), Postives = 183/249 (73.49%), Query Frame = 0 Query: 134 LSPSFSPTGK-GEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLEEE 382 +S + +GK G ITLVGAGPGDPDLLTL A++A+ AD+V+ADRL+ E+LAL+ LKIA K PGCA +AQ EIYRW EG+ E K +VRLKIGDPF+FGRGGEEVL+ R GVE ++IPG+SSALA PL IPVTHRGVAN+V CTG GKE P + Y+P QT VFLMAVGRL L++ L + GYP TPV I+E+A+TP +RT+ G + I + A + ++ P+VIVVGE V VL ++E Sbjct: 5 ISNHAASSGKLGSITLVGAGPGDPDLLTLGALKAIHAADLVIADRLVSKEILALIKSELKIAQKYPGCAHDAQNEIYRWCAEGLVEGKKIVRLKIGDPFVFGRGGEEVLELR-KFGVEAKVIPGISSALAGPLAAGIPVTHRGVANRVVFCTGMGKEESIPDIPAYHPEQTCVFLMAVGRLKALTDDLTK-GGYPSTTPVGIIERATTPHERTIRGTIEDIVILASEEKIRPPSVIVVGEAVNVLSKQE 251
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_002180504.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47912.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 278.5 bits (711), Expect = 3.200e-71 Identity = 142/228 (62.28%), Postives = 178/228 (78.07%), Query Frame = 0 Query: 149 VGAGPGDPDLLTLAAIRALSTAD--IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVV 375 VG+GPGDPDLLT+AA + L++ +VVADRL+ PE+LAL+ G +K+A K PGCAE AQ+EIY W +G+ + +HV+RLKIGDPF+FGRGGEE+L +RD GVE ++PGVSSA +APLLG IPVTHRGVA QV +CTG+G+EG P L Y+ QT VFLMAVGRL L ++L++ AGYP TPVAIVE+A P QRTVVG + TIA AE+ +K P+VIVVGEVV Sbjct: 1 VGSGPGDPDLLTVAAYKLLTSDPDALVVADRLVSPEILALIPGEVKVARKLPGCAELAQEEIYWWCYQGLNQGRHVIRLKIGDPFVFGRGGEEILAFRD-FGVEAAVVPGVSSAFSAPLLGGIPVTHRGVAQQVVMCTGYGREGSSPDLIQYHKEQTVVFLMAVGRLRSLCDKLIELAGYPRDTPVAIVEKAGCPEQRTVVGNMMTIADIAEEHKIKPPSVIVVGEVV 227
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_009042245.1 (hypothetical protein AURANDRAFT_39455 [Aureococcus anophagefferens] >EGB03056.1 hypothetical protein AURANDRAFT_39455 [Aureococcus anophagefferens]) HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69 Identity = 133/236 (56.36%), Postives = 177/236 (75.00%), Query Frame = 0 Query: 143 KGEITLVGAGPGDPDLLTLAAIRALSTAD-IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVL 378 KG +TLVGAGPGDP+LLT+AA+R +S + +VVADRL+ PE+ +LV G L++AGK PGCAE+AQ+EIY W EGV E + V+RLKIGDPF+FGRGGEE+L++R+ LG+E ++PGVSS LAAPL +PVTHRG A+Q+ + TG+G++G P L Y+ N+T V LMAVGRLG++ ++ G+P P +VEQAS+PRQRTVVG + IA + +KAPA +V G RVL Sbjct: 44 KGTVTLVGAGPGDPELLTVAALRLISDPEALVVADRLVSPEIRSLVQGELRVAGKAPGCAEKAQREIYDWCVEGVNEGRRVIRLKIGDPFVFGRGGEEILEFRETLGLEAEVVPGVSSCLAAPLAAGVPVTHRGAAHQLVVSTGYGRDGSSPELPYYDENRTVVLLMAVGRLGKIVANCLEAQGFPRDCPALVVEQASSPRQRTVVGDLSDIADLVLEHDIKAPATVVFGAAARVL 279
BLAST of NO12G00790 vs. NCBI_GenBank
Match: GAX26883.1 (uroporphyrin-III C-methyltransferase [Fistulifera solaris]) HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69 Identity = 139/243 (57.20%), Postives = 180/243 (74.07%), Query Frame = 0 Query: 140 PTGKGEITLVGAGPGDPDLLTLAAIRALSTAD---IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE 380 P G G++TL+G+GPGDPDLLT+AA + L+ D +V+ DRL+ E+L L+ +KIA K PGCA+ AQ+EIY W + + + KHV+RLKIGDPF+FGRGGEEVLK+R GVE +++PGVS+A +APLLG IPVTHRG ANQV +CTG+G++ P L Y+ QT VFLMAVGRL +L L++ A YPP TPVAI+E+A P QRTVVG + IA AE+ +K P+ IVVGEVV LL+ Sbjct: 69 PNG-GQVTLLGSGPGDPDLLTVAAFKLLTKKDPNTLVIVDRLVSQEILDLIPNEIKIARKLPGCADLAQEEIYWWAYQALNKGKHVIRLKIGDPFVFGRGGEEVLKFR-CFGVEAKVVPGVSAAFSAPLLGMIPVTHRGYANQVVMCTGYGRDNSSPDLIQYHKEQTVVFLMAVGRLQQLCTSLIEKANYPPSTPVAIIEKAGCPDQRTVVGDMTNIADIAEQHKIKPPSTIVVGEVVHALLD 309
BLAST of NO12G00790 vs. NCBI_GenBank
Match: GAX11087.1 (uroporphyrin-III C-methyltransferase [Fistulifera solaris]) HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69 Identity = 139/243 (57.20%), Postives = 180/243 (74.07%), Query Frame = 0 Query: 140 PTGKGEITLVGAGPGDPDLLTLAAIRALSTAD---IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE 380 P G G++TL+G+GPGDPDLLT+AA + L+ D +V+ DRL+ E+L L+ +KIA K PGCA+ AQ+EIY W + + + KHV+RLKIGDPF+FGRGGEEVLK+R GVE +++PGVS+A +APLLG IPVTHRG ANQV +CTG+G++ P L Y+ QT VFLMAVGRL +L L++ A YPP TPVAI+E+A P QRTVVG + IA AE+ +K P+ IVVGEVV LL+ Sbjct: 69 PNG-GQVTLLGSGPGDPDLLTMAAFKLLTKKDPNTLVIVDRLVSREILDLIPNEIKIARKLPGCADLAQEEIYWWAYQALNKGKHVIRLKIGDPFVFGRGGEEVLKFRH-FGVEAKVVPGVSAAFSAPLLGMIPVTHRGYANQVVMCTGYGRDNSSPDLIQYHKEQTVVFLMAVGRLQQLCRSLIEKANYPPSTPVAIIEKAGCPDQRTVVGDMTNIADIAEQHKIKPPSTIVVGEVVHALLD 309
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_009034250.1 (hypothetical protein AURANDRAFT_12010, partial [Aureococcus anophagefferens] >EGB10650.1 hypothetical protein AURANDRAFT_12010, partial [Aureococcus anophagefferens]) HSP 1 Score: 268.9 bits (686), Expect = 2.600e-68 Identity = 130/230 (56.52%), Postives = 174/230 (75.65%), Query Frame = 0 Query: 143 KGEITLVGAGPGDPDLLTLAAIRALSTAD-IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVG 372 KG +TLVGAGPGDP+LLT+AA+R +S + +VVADRL+ PE+ +LV G L++AGK PGCAE+AQ+EIY W EGV E + V+RLKIGDPF+FGRGGEE+L++R+ LG+E ++PGVSS LAAPL +PVTHRG A+Q+ + TG+G++G P L Y+ N+T V LMAVGRLG++ ++ G+P P +VEQAS+PRQRTVVG + IA + +KAPA +V G Sbjct: 1 KGTVTLVGAGPGDPELLTVAALRLISDPEALVVADRLVSPEIRSLVQGELRVAGKAPGCAEKAQREIYDWCVEGVNEGRRVIRLKIGDPFVFGRGGEEILEFRETLGLEAEVVPGVSSCLAAPLAAGVPVTHRGAAHQLVVSTGYGRDGSSPELPYYDENRTVVLLMAVGRLGKIVANCLEAQGFPRDCPALVVEQASSPRQRTVVGDLSDIADLVLEHDIKAPATVVFG 230 The following BLAST results are available for this feature:
BLAST of NO12G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00790 ID=NO12G00790|Name=NO12G00790|organism=Nannochloropsis oceanica|type=gene|length=1777bpback to top protein sequence of NO12G00790.1 >NO12G00790.1-protein ID=NO12G00790.1-protein|Name=NO12G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bpback to top Synonyms
Publications
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