NO12G00790, NO12G00790 (gene) Nannochloropsis oceanica

Overview
NameNO12G00790
Unique NameNO12G00790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1777
Alignment locationchr12:264660..266436 -

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Properties
Property NameValue
DescriptionUroporphyrinogen 3 C-methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:264660..266436 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR0359964pyrrol_Methylase_sf
IPR0008784pyrrol_Mease
Homology
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_005856041.1 (uroporphyrinogen 3 C-methyltransferase [Nannochloropsis gaditana CCMP526] >EKU20334.1 uroporphyrinogen 3 C-methyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 391.3 bits (1004), Expect = 3.400e-105
Identity = 205/280 (73.21%), Postives = 232/280 (82.86%), Query Frame = 0
Query:  119 LQAFRNDSSSFGPSSLSPSFSPT-GKGEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE-----EEGGRRRWRERGG 393
            + AF ND S FGPSSL+PS  P+  +G ITLVGAGPGDPDLLTLAAIRA++TAD+VVADRLIPPEML LVTG LKIAGKRPGCA+ AQ+EIY+WV +G+   +HVVRLKIGDPFLFGRGGEEVL++R+ LGV+P +IPGVSSA AAPLL +IPVTHRGV+NQVY+CTGFGK GDRPYLAP+  NQTAVFLMAVGRL EL+ QL   AGYP  TPVAIVEQASTPRQRTVV  +  IA  AE+V V APAV+VVGEVVRVLLE     EEGGR    + GG
Sbjct:   86 VSAFLNDDSRFGPSSLTPSPGPSPPQGRITLVGAGPGDPDLLTLAAIRAMATADLVVADRLIPPEMLKLVTGNLKIAGKRPGCADAAQKEIYQWVRDGMAARQHVVRLKIGDPFLFGRGGEEVLEFREKLGVDPEIIPGVSSAFAAPLLAAIPVTHRGVSNQVYVCTGFGKGGDRPYLAPFYVNQTAVFLMAVGRLRELTRQLTSVAGYPEETPVAIVEQASTPRQRTVVATLDKIAAVAERVRVTAPAVVVVGEVVRVLLEEGEDGEEGGRVIEGKAGG 365          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: EWM25943.1 (putative uroporphyrin-3 c-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 389.8 bits (1000), Expect = 1.000e-104
Identity = 202/272 (74.26%), Postives = 228/272 (83.82%), Query Frame = 0
Query:  119 LQAFRNDSSSFGPSSLSPSFSPT-GKGEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE-----EEGGR 385
            + AF ND S  GPSSL+PS  P+  +G ITLVGAGPGDPDLLTLAAIRA++TAD+VVADRLIPPEML LVTG LKIAGKRPGCA+ AQ+EIY+WV +G+   +HVVRLKIGDPFLFGRGGEEVL++R+ LGV+P +IPGVSSA AAPLL +IPVTHRGV+NQVY+CTGFGK GDRPYLAP+  NQTAVFLMAVGRL EL+ QL   AGYP  TPVAIVEQASTPRQRTVV  +  IA  AE+V V APAV+VVGEVVRVLLE     EEGGR
Sbjct:  219 VSAFLNDDSRLGPSSLTPSPGPSPPQGRITLVGAGPGDPDLLTLAAIRAMATADLVVADRLIPPEMLKLVTGNLKIAGKRPGCADAAQKEIYQWVRDGMAARQHVVRLKIGDPFLFGRGGEEVLEFREKLGVDPEIIPGVSSAFAAPLLAAIPVTHRGVSNQVYVCTGFGKGGDRPYLAPFYANQTAVFLMAVGRLRELTRQLTSVAGYPEETPVAIVEQASTPRQRTVVATLDKIAAVAERVRVTAPAVVVVGEVVRVLLEEGEDGEEGGR 490          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: CBN77740.1 (uroporphyrinogen-III C-methyltransferase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 289.3 bits (739), Expect = 1.800e-74
Identity = 148/240 (61.67%), Postives = 185/240 (77.08%), Query Frame = 0
Query:  144 GEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLEEEGG 384
            G  +LVG+GPGDPDLLT+A +R L +AD+V+ADRL+  E+L LV G L++A K PGCAE+AQ+EIYRW+ EG+   KHVVRLKIGDPF+FGRGGEEVL  R+ LGVEP+++PG+SS  +APLLG +PVTHRGVA QV + TG+G++  RP +  Y+P +TAVFLMA+GRL EL   LV+ + YP  TPVAI+E ASTPRQR + G V TI+  A  + VKAPA IVVGEVV VL   E G
Sbjct:  118 GTCSLVGSGPGDPDLLTVAGLRELQSADLVIADRLVSKEILGLVEGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPFIFGRGGEEVLVMRE-LGVEPKVVPGISSVFSAPLLGGVPVTHRGVATQVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCADLVRRS-YPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQG 355          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: OEU16305.1 (uroporphyrin-III C-m [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 287.3 bits (734), Expect = 7.000e-74
Identity = 148/257 (57.59%), Postives = 192/257 (74.71%), Query Frame = 0
Query:  126 SSSFGPSSLSPSFSPTGKGEITLVGAGPGDPDLLTLAAIRALSTAD-IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLEEE 382
            S++  P S +P  +    G ITLVG+GPGDPDLLT+ A + L   D ++++DRL+  E+L +V G +KIA K PGCAE AQ+EIY W  EG+   KHV+RLKIGDPF+FGRGGEEV+++R   GVE +++PGVSSA +APLL +IPVTHRGV+NQV +CTG+G+EG  P L  Y+  QT VFLMAVGRL +L ++LV  AGYP  TPV I+E+A  P QRTVVG + TIA  AEK  ++AP+ IVVG+VV VLLE++
Sbjct:   89 SATLEPFSDTPKDALGNGGRITLVGSGPGDPDLLTVKAYKLLQDPDALIISDRLVSQEILDIVKGEIKIARKMPGCAEFAQEEIYFWTHEGLAAGKHVIRLKIGDPFVFGRGGEEVIQFR-KFGVESKVVPGVSSAFSAPLLANIPVTHRGVSNQVVMCTGYGREGTSPDLIQYHEEQTIVFLMAVGRLRQLCDRLVNLAGYPKDTPVGIIERAGCPNQRTVVGNMQTIADIAEKYNIQAPSTIVVGKVVDVLLEKD 344          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_005831076.1 (hypothetical protein GUITHDRAFT_87531 [Guillardia theta CCMP2712] >EKX44096.1 hypothetical protein GUITHDRAFT_87531 [Guillardia theta CCMP2712])

HSP 1 Score: 278.9 bits (712), Expect = 2.500e-71
Identity = 145/249 (58.23%), Postives = 183/249 (73.49%), Query Frame = 0
Query:  134 LSPSFSPTGK-GEITLVGAGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLEEE 382
            +S   + +GK G ITLVGAGPGDPDLLTL A++A+  AD+V+ADRL+  E+LAL+   LKIA K PGCA +AQ EIYRW  EG+ E K +VRLKIGDPF+FGRGGEEVL+ R   GVE ++IPG+SSALA PL   IPVTHRGVAN+V  CTG GKE   P +  Y+P QT VFLMAVGRL  L++ L +  GYP  TPV I+E+A+TP +RT+ G +  I + A +  ++ P+VIVVGE V VL ++E
Sbjct:    5 ISNHAASSGKLGSITLVGAGPGDPDLLTLGALKAIHAADLVIADRLVSKEILALIKSELKIAQKYPGCAHDAQNEIYRWCAEGLVEGKKIVRLKIGDPFVFGRGGEEVLELR-KFGVEAKVIPGISSALAGPLAAGIPVTHRGVANRVVFCTGMGKEESIPDIPAYHPEQTCVFLMAVGRLKALTDDLTK-GGYPSTTPVGIIERATTPHERTIRGTIEDIVILASEEKIRPPSVIVVGEAVNVLSKQE 251          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_002180504.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47912.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 278.5 bits (711), Expect = 3.200e-71
Identity = 142/228 (62.28%), Postives = 178/228 (78.07%), Query Frame = 0
Query:  149 VGAGPGDPDLLTLAAIRALSTAD--IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVV 375
            VG+GPGDPDLLT+AA + L++    +VVADRL+ PE+LAL+ G +K+A K PGCAE AQ+EIY W  +G+ + +HV+RLKIGDPF+FGRGGEE+L +RD  GVE  ++PGVSSA +APLLG IPVTHRGVA QV +CTG+G+EG  P L  Y+  QT VFLMAVGRL  L ++L++ AGYP  TPVAIVE+A  P QRTVVG + TIA  AE+  +K P+VIVVGEVV
Sbjct:    1 VGSGPGDPDLLTVAAYKLLTSDPDALVVADRLVSPEILALIPGEVKVARKLPGCAELAQEEIYWWCYQGLNQGRHVIRLKIGDPFVFGRGGEEILAFRD-FGVEAAVVPGVSSAFSAPLLGGIPVTHRGVAQQVVMCTGYGREGSSPDLIQYHKEQTVVFLMAVGRLRSLCDKLIELAGYPRDTPVAIVEKAGCPEQRTVVGNMMTIADIAEEHKIKPPSVIVVGEVV 227          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_009042245.1 (hypothetical protein AURANDRAFT_39455 [Aureococcus anophagefferens] >EGB03056.1 hypothetical protein AURANDRAFT_39455 [Aureococcus anophagefferens])

HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69
Identity = 133/236 (56.36%), Postives = 177/236 (75.00%), Query Frame = 0
Query:  143 KGEITLVGAGPGDPDLLTLAAIRALSTAD-IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVL 378
            KG +TLVGAGPGDP+LLT+AA+R +S  + +VVADRL+ PE+ +LV G L++AGK PGCAE+AQ+EIY W  EGV E + V+RLKIGDPF+FGRGGEE+L++R+ LG+E  ++PGVSS LAAPL   +PVTHRG A+Q+ + TG+G++G  P L  Y+ N+T V LMAVGRLG++    ++  G+P   P  +VEQAS+PRQRTVVG +  IA    +  +KAPA +V G   RVL
Sbjct:   44 KGTVTLVGAGPGDPELLTVAALRLISDPEALVVADRLVSPEIRSLVQGELRVAGKAPGCAEKAQREIYDWCVEGVNEGRRVIRLKIGDPFVFGRGGEEILEFRETLGLEAEVVPGVSSCLAAPLAAGVPVTHRGAAHQLVVSTGYGRDGSSPELPYYDENRTVVLLMAVGRLGKIVANCLEAQGFPRDCPALVVEQASSPRQRTVVGDLSDIADLVLEHDIKAPATVVFGAAARVL 279          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: GAX26883.1 (uroporphyrin-III C-methyltransferase [Fistulifera solaris])

HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69
Identity = 139/243 (57.20%), Postives = 180/243 (74.07%), Query Frame = 0
Query:  140 PTGKGEITLVGAGPGDPDLLTLAAIRALSTAD---IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE 380
            P G G++TL+G+GPGDPDLLT+AA + L+  D   +V+ DRL+  E+L L+   +KIA K PGCA+ AQ+EIY W  + + + KHV+RLKIGDPF+FGRGGEEVLK+R   GVE +++PGVS+A +APLLG IPVTHRG ANQV +CTG+G++   P L  Y+  QT VFLMAVGRL +L   L++ A YPP TPVAI+E+A  P QRTVVG +  IA  AE+  +K P+ IVVGEVV  LL+
Sbjct:   69 PNG-GQVTLLGSGPGDPDLLTVAAFKLLTKKDPNTLVIVDRLVSQEILDLIPNEIKIARKLPGCADLAQEEIYWWAYQALNKGKHVIRLKIGDPFVFGRGGEEVLKFR-CFGVEAKVVPGVSAAFSAPLLGMIPVTHRGYANQVVMCTGYGRDNSSPDLIQYHKEQTVVFLMAVGRLQQLCTSLIEKANYPPSTPVAIIEKAGCPDQRTVVGDMTNIADIAEQHKIKPPSTIVVGEVVHALLD 309          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: GAX11087.1 (uroporphyrin-III C-methyltransferase [Fistulifera solaris])

HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69
Identity = 139/243 (57.20%), Postives = 180/243 (74.07%), Query Frame = 0
Query:  140 PTGKGEITLVGAGPGDPDLLTLAAIRALSTAD---IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVGEVVRVLLE 380
            P G G++TL+G+GPGDPDLLT+AA + L+  D   +V+ DRL+  E+L L+   +KIA K PGCA+ AQ+EIY W  + + + KHV+RLKIGDPF+FGRGGEEVLK+R   GVE +++PGVS+A +APLLG IPVTHRG ANQV +CTG+G++   P L  Y+  QT VFLMAVGRL +L   L++ A YPP TPVAI+E+A  P QRTVVG +  IA  AE+  +K P+ IVVGEVV  LL+
Sbjct:   69 PNG-GQVTLLGSGPGDPDLLTMAAFKLLTKKDPNTLVIVDRLVSREILDLIPNEIKIARKLPGCADLAQEEIYWWAYQALNKGKHVIRLKIGDPFVFGRGGEEVLKFRH-FGVEAKVVPGVSAAFSAPLLGMIPVTHRGYANQVVMCTGYGRDNSSPDLIQYHKEQTVVFLMAVGRLQQLCRSLIEKANYPPSTPVAIIEKAGCPDQRTVVGDMTNIADIAEQHKIKPPSTIVVGEVVHALLD 309          
BLAST of NO12G00790 vs. NCBI_GenBank
Match: XP_009034250.1 (hypothetical protein AURANDRAFT_12010, partial [Aureococcus anophagefferens] >EGB10650.1 hypothetical protein AURANDRAFT_12010, partial [Aureococcus anophagefferens])

HSP 1 Score: 268.9 bits (686), Expect = 2.600e-68
Identity = 130/230 (56.52%), Postives = 174/230 (75.65%), Query Frame = 0
Query:  143 KGEITLVGAGPGDPDLLTLAAIRALSTAD-IVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAPAVIVVG 372
            KG +TLVGAGPGDP+LLT+AA+R +S  + +VVADRL+ PE+ +LV G L++AGK PGCAE+AQ+EIY W  EGV E + V+RLKIGDPF+FGRGGEE+L++R+ LG+E  ++PGVSS LAAPL   +PVTHRG A+Q+ + TG+G++G  P L  Y+ N+T V LMAVGRLG++    ++  G+P   P  +VEQAS+PRQRTVVG +  IA    +  +KAPA +V G
Sbjct:    1 KGTVTLVGAGPGDPELLTVAALRLISDPEALVVADRLVSPEIRSLVQGELRVAGKAPGCAEKAQREIYDWCVEGVNEGRRVIRLKIGDPFVFGRGGEEILEFRETLGLEAEVVPGVSSCLAAPLAAGVPVTHRGAAHQLVVSTGYGRDGSSPELPYYDENRTVVLLMAVGRLGKIVANCLEAQGFPRDCPALVVEQASSPRQRTVVGDLSDIADLVLEHDIKAPATVVFG 230          
The following BLAST results are available for this feature:
BLAST of NO12G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856041.13.400e-10573.21uroporphyrinogen 3 C-methyltransferase [Nannochlor... [more]
EWM25943.11.000e-10474.26putative uroporphyrin-3 c-methyltransferase [Nanno... [more]
CBN77740.11.800e-7461.67uroporphyrinogen-III C-methyltransferase, putative... [more]
OEU16305.17.000e-7457.59uroporphyrin-III C-m [Fragilariopsis cylindrus CCM... [more]
XP_005831076.12.500e-7158.23hypothetical protein GUITHDRAFT_87531 [Guillardia ... [more]
XP_002180504.13.200e-7162.28predicted protein, partial [Phaeodactylum tricornu... [more]
XP_009042245.11.400e-6956.36hypothetical protein AURANDRAFT_39455 [Aureococcus... [more]
GAX26883.11.400e-6957.20uroporphyrin-III C-methyltransferase [Fistulifera ... [more]
GAX11087.11.400e-6957.20uroporphyrin-III C-methyltransferase [Fistulifera ... [more]
XP_009034250.12.600e-6856.52hypothetical protein AURANDRAFT_12010, partial [Au... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009990NSK009990Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00790.1NO12G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
UPMgene4578Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00790.1NO12G00790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00790 ID=NO12G00790|Name=NO12G00790|organism=Nannochloropsis oceanica|type=gene|length=1777bp
ATGGTACGCTACGCGCAAACTGGgtaggtgccgtttagtgtggtaatgtg
gtcgtagtagtcatcgaagcgacgcctcattgcactagggggcatatgca
tcatatattgccattgcgtgtacattcgtcatatctcgaggtttgcttgg
ccgcagccggtcatcgcccccatttctattcaaccgcgcgttcttttggc
cacaaaactcccgcttcactcaagtaacacgcgctggtatcacttctgtc
acacggacacagGCAGCAGGCAAGGCAGAGCGAGTGGTGTGTGCGGTTTG
ACCAGAGTCTCCCCGCCCATCCATCAAAAGGAGTACCAGCAGCACTTGCC
CTCCCTCTTCCAACAACTAACACAGCCATTGCCCTGTCGACCAGGCGAGC
AGCGCCACATCACCACCGACAATCCCACAGgtaagcactcattcttaagc
ggtagcaactccgtgctcttcacatccctcccctctccattcatttgcgc
acatccgcatctaaagcaaactgccgcggtcccaccctcccgcgcactcc
tccgaccccgcctccctctctacccatcaaaaaatccagcacaaatcaac
caccaccttttgagttcagtaagaacgatgcatgagcgccatcaccacac
gtattccccgctcaacttcccttctcctcgcgcgctctctctcactgttc
ctcttaacatagctgttgctctcgcttcgcctcatctcctcgacaccctc
tccccgtctaccacacccgacacacacacacagAACAATGGCCACTACAA
CTACCGTCAGCACGGCCTCTTTCCTCTTTCTGCTCTTACTGGGCAGCAGC
AGCACCAGCATCACAGCTTTCTTCCTTCCCCCCTCCTCCTCCCAATACTC
CCCCTCCTCCTACCTCCTTCGACGCTCCCGAACCACCTCCACTATTCTCC
AGGCCTTCCGCAACGACAGCAGTAGTTTCGGTCCTTCCTCCCTCTCTCCC
TCCTTCTCTCCCACAGGCAAGGGAGAGATCACGCTGGTGGGCGCAGGCCC
TGGTGATCCCGACCTCCTCACCCTCGCGGCTATCCGGGCCCTGTCAACAG
CTGATATCGTCGTGGCGGACCGACTTATACCTCCCGAGATGCTGGCCTTG
GTAACGGGTACGTTAAAAATAGCGGGCAAGCGCCCAGGCTGCGCAGAGGA
GGCGCAGCAAGAGATTTATCGATGGGTGGAGGAGGGTGTAAAAGAGGAGA
AGCACGTGGTACGACTCAAAATTGGCGACCCGTTTTTGTTTGGAAGAGGA
GGGGAGGAGGTGCTCAAGTATCGAGATGCTTTGGGGGTGGAGCCACGATT
GATTCCGGGGGTAAGCTCGGCATTGGCGGCGCCCTTACTCGGATCCATTC
CCGTCACTCACCGAGGAGTGGCGAACCAGGTGTACATCTGCACGGGGTTC
GGCAAGGAGGGAGACCGGCCTTACCTCGCTCCGTACAACCCGAACCAAAC
TGCGGTGTTCTTGATGGCTGTGGGGAGGCTGGGCGAGCTGTCGGAGCAGC
TGGTGCAGACAGCTGGGTACCCTCCTTTCACACCTGTGGCGATCGTGGAG
CAGGCGTCGACGCCGAGGCAAAGGACGGTGGTGGGGAGGGTGGGCACGAT
AGCAATGTATGCGGAGAAAGTTGGAGTGAAGGCCCCGGCGGTGATCGTGG
TAGGGGAGGTGGTAAGGGTGTTGTTGGAGGAGGAGGGGGGGAGGAGGAGG
TGGAGAGAGAGGGGGGGAGGATTGTGA
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protein sequence of NO12G00790.1

>NO12G00790.1-protein ID=NO12G00790.1-protein|Name=NO12G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MVRYAQTGQQARQSEWCVRFDQSLPAHPSKGVPAALALPLPTTNTAIALS
TRRAAPHHHRQSHRTMATTTTVSTASFLFLLLLGSSSTSITAFFLPPSSS
QYSPSSYLLRRSRTTSTILQAFRNDSSSFGPSSLSPSFSPTGKGEITLVG
AGPGDPDLLTLAAIRALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGC
AEEAQQEIYRWVEEGVKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVE
PRLIPGVSSALAAPLLGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNP
NQTAVFLMAVGRLGELSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRV
GTIAMYAEKVGVKAPAVIVVGEVVRVLLEEEGGRRRWRERGGGL*
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