Naga_100014g83, gene4442 (gene) Nannochloropsis gaditana

Overview
NameNaga_100014g83
Unique Namegene4442
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1017690..1020318 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100014g83
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1017690..1020318 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005102signaling receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
GO:0005737cytoplasm
GO:0005856cytoskeleton
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00420NO06G00420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4605rna4605-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4604rna4604-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4605rna4605Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4604rna4604Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4605

>rna4605-protein ID=rna4605-protein|Name=rna4605|organism=Nannochloropsis gaditana|type=polypeptide|length=523bp
MAGVGKIEAWVRENVARLLCMDVNDSEELAACVLAMPCATDKEEREIKQL
IKEFLGSSAEVETFSTEVVQRRRRPGEGVPVTERADEAKGGTQAGSDIDR
GGKSGKRQNAKEERGEMMKPPGKAVRDTTAQEEAEDDFWGTLSSTSLHRS
DAASACGGRQDNSTSGKRQGRMEDKAKSQSRESERVRKGKNQGGGGRAVP
AASGGGRDVVCRQPLTASPTDDFAYQPSIMARPAPFPCRCMGTCHTPLGN
CLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAV
ENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTS
GNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGI
DTGKEESDAGRIGTNEAAEEVARLAWELSTSGTLEGNYDREGARKGKSGV
SRLSGRAREVFEGLHAHFGRIKSSNYAKEREKRQGHPEGEDAEPKAETFS
SRSRVQTTSDRLHDDEEMEIEDL
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protein sequence of rna4604

>rna4604-protein ID=rna4604-protein|Name=rna4604|organism=Nannochloropsis gaditana|type=polypeptide|length=523bp
MAGVGKIEAWVRENVARLLCMDVNDSEELAACVLAMPCATDKEEREIKQL
IKEFLGSSAEVETFSTEVVQRRRRPGEGVPVTERADEAKGGTQAGSDIDR
GGKSGKRQNAKEERGEMMKPPGKAVRDTTAQEEAEDDFWGTLSSTSLHRS
DAASACGGRQDNSTSGKRQGRMEDKAKSQSRESERVRKGKNQGGGGRAVP
AASGGGRDVVCRQPLTASPTDDFAYQPSIMARPAPFPCRCMGTCHTPLGN
CLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAV
ENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTS
GNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGI
DTGKEESDAGRIGTNEAAEEVARLAWELSTSGTLEGNYDREGARKGKSGV
SRLSGRAREVFEGLHAHFGRIKSSNYAKEREKRQGHPEGEDAEPKAETFS
SRSRVQTTSDRLHDDEEMEIEDL
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Synonyms
Publications