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Properties
| Property Name | Value |
| Product | activating signal cointegrator 1 |
| Orig transcript id | gnl|cribi|Naga_100014g83.9325.mrna |
| Orig protein id | gnl|cribi|Naga_100014g83.9325 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002463.1 | supercontig | CM002463.1:1017690..1020318 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4604 ID=rna4604|Name=rna4604|organism=Nannochloropsis gaditana|type=mRNA|length=5580bp GGCTCACCAATACTTTTGCCCCGGAGAAAATGGCCTTAACGTGTTTTTTA TTGCATCCCTTTTTTCCCACTCTCATGACAGCCAAACCTTCCGTTTTATT CCTGGTTCTTCTTTGGGATCTGCCCATTAACTCGGGGCAAAGGGTGAATC TTTGTGACACATTTATCTGGTAACACATTTATCGTACCTATTGATGCAAA ACGAGCTCGTGAAAAACGTGGATGCTTCCCCGCTCCCCATGCCTGGGGCT CTTGCGTCTACGGACATTCGGCCTCAGCCTGTAGAAAAGCCTTCAGTTGT ACTCGAGGGCCCAGCAGAATCCCAATCAGATAGTACGTCTAAGATAGTTG GTGACAATATAAGAGCGATTAAGCCATCGACGGATAAGCGTTCGTTTATT CCTGCACCCACACCCTCCGGTGAACCCTGCGTGTCGTCGCTTCTCGGGTC AGCGGCTATGACCTCTCCTGTCTCACAGTCCTGCGACTTAATTGTCGATA ACCCAACGAGAACTTATTCATATGCATCAAAGTTGAAAATGGGAAGCATG GGAAAAGCAATCAAGTCATCAGAGTCCCTCAAACAACTTGAGCAGCAGCA GCACACAGATGAGACAAATCAGAAATTTGACAGAACTTCGCTTTCTTCAA CTCACCCATCAAACGGCAATGTACGTGCTGCTGACGTTTTCCAGAAGAAA AAGTATAAGAGTGGCGATCCTTGCAAGGCACCCAGCTCTGACATTTCCTC GGATTCGACGACCGAGCATGTTACCCTGGACACTCTTTCCAACCATTCGA GGGAAAACTCCCACTCCGGTTTGGAAGTCGACAAATTTCACGAGGAGACA GGCAGAATAATATCACATTCCAAACTTCCTTCGTGCGGTACCCTTGGGTC TCTGATAAACGAAGACCTCCTCGAGATTGGGGAGGATGAGGGGCTGACGC AGGCAGGAAGGACTGAGGGACTTTTGCTGGACGATACTTGTGTACAGGGA AGAGATCTTCCTCTTTCTCCTCCATTCAATTATTATCACGACCAGGATTA TTTTTTTGAAGGACAACACCCAGAACATAAATCTCCGCAGGAACAGGAAC CGCAGCAGCAGATCCAATGCCCACAAGCGAAGGAAATGGCCGCTGAAGCG TTGCCCTCGGTGGCAAGCGTCTCTCTTGATATTGAAACCCCTGCTAAAAA GGGAAAAACGAAGCAATCTTGCCCCTCGTTGGTGCTAGACCCATCCACGG GGGTTGAAGCAATTACAAGATCGATGGAATGCGGCAGTGGTACCACGCAG ATAAGCGGCAGCGGCAGCAGCCTCAGGGCGTGTGAGAGCAACACCAGCAA CGGCTCTGGAATCTTGCGGAAAGGAAAGTGGACCGTCGAGGAAGAGGAGT ATACAGCTCGACTCATTTACTACTTTAACCGCGGTCTGCTTCAGCTGCCT GAGGGGCAGACTCTACGGGCGTACATCTCCCACAAACTCAAGTGCGACCC CATGCGCGTCACAAAGAAATTCACCGGTGCTTGCTGTATCGGAAAAAAGG CTTTCAGCGGTGCACAGCAAGCTCTACAGCCACATCTACAGAGAGGAGAG GTAGGACAGGGTGTGGCTCCTGAGGACGTGAATCGAGCAAAGGAGGAATT GGAAAGATTGGAAAAACGCTTTTGGACGACGCTGGAGCAGTCGGAAGAGG GCTACTGCTATCGAAACGGTGTGCTAGGACTGGGATGGGGATTTGACTGC ATGATGCTGGGACGAGGGGGAGAAGCAGAGATGGCCCAGCAACAGTCCTG GAATCCCATTTTGCTCGCTGCTTATCAGCAACAGTTGATGGCGACAGCTG CACCGAGAGCTGAGGGGAATGCAAAAGGGACAGACAACCAGGGGGAAGGC GGCGGAGGGGCTGGGAGTGGAGTCTCAAATAAAGGCAACGGAAGCAACAG TAGCAGCACCACCTTGCCTTCTTCACTCCCAAACACGATCAAGATGGACC AGAGCCAAGCCCTTGCTCTCTACGCGCGCTTAGGCATTCCACCGCCGCCG CCTACGTATTTAGACCCCACCGTCCGAAAGACACTCAACCTTCCACTGCC GGGAAGCAAGCAGCGGGGCGGCTTGAAAAACAACTTTGGCCTCAACCTAA ATGACCTTGGCAGCACCATCGGAGAAAAGGGTGCTAGCACTCGTTTTTCT CGCACCCTTGACGATGTCAAGAACGGGTCTGAGGGCCGGGGGGATGTCCA AGGTTGTTCTTCGATCGCCCAGGCTATAACCCCTCTCGACGTGACTCCGC ACGCGGCGCACCACACACCTTTTCTACCTTCGCTTCCTTCCGCACTCTCC TTGCCAGCTCCACTAACGTCTCTTCCTCCTCCAGTGCCCAGTGCGGCAGC GCTTGCTGTCCAAGCAGCTTCTACTTCCAACGCAACACACGTGGGAGCTG CAGCTGGCCACGGGGAAAAGATGCAATCAACAGCGGCTACTATGCTGACA GAGATTACGCCCGCGGAAAAAATGACGCCCTCAACGACGGCCGAAACGAA GGAATGCAAGGGGGGGAAAAAGAATGCAAGAGATTGTGGAGCTGCAGAGG CTTCTCACCTTCTGATGCCCATTCCTAGTCCTCGTAACGTTCAGGTGGAT GATCGCTCCTCGACTTCAAAGGTTTCCCCCGCAACGAAGATATGTGAGGG CTCACCTATCGATAAATCACTCGTGGAGGGGAAGGGGATAAATGGAGCGG GACCACTGAACGTTTACGCTCAGACTGGTCCTACAACCTTCGCTCCTTTT ATGCCCATGCTGCCTACATCCATGACACCGCAACAATTGTACTATTACCG ACAATTCTTAAACTTGCAGCACCAGCTCCACCAGCAGCAGCTAGCTTTTT CCTTTCCCTTACCCGGACACACCTCGGGAACGACTCGAGCCGCAAATCTT GACGCGGGAAATACCTGCGGCATCAAAAGCAACTGCAAAAGCAGCAACGA GATGAGCATACCTTCATCAGGGGGCACAGTTGTTGCTGTAGATGGCTCTT CCATCGCGCCCAAGTCCCTGGTTTCCCCTGCGGCCGACGTCGCCGCCTCC GGTTGTCGGGGCCCAAGCCTCGCTAGCCAGGGCAGGCTCTCGGCTGCTGC GGTGCAGGTTGGCGGGAAAAGGAAATGCGATACAACAGAAGAGAAGGAAG GAGAGAAGAAGCCAGTTTTGGGTAAGCGGGGCCGCGGTCGACCGAAAGGG TCTTCATCTAAGAAAGCAAAAGACGACAGCGTGATGGTGGTTGCTTCGGC GACGGGGGGCAGGGCTTATGCCAGGACAAAAGGCAAGGAGCTGGGCACAA AAACAGAGAGGGATGAAGGGGACAGAGACAAGGCACACTTGGAGGCTTCT ATAAGGGCCTCCGTTGCCCAAAACATCGAAGAAGACGCTGTCCTCTCTCA TCCCTGCAGATTGCTTCCGGGCCAGCAGCCGCAGCAGCAACAAGGTGAAA GCTGGCCGTTGTCGAGCGAATTGGGGCTAGGAAGTGGATTAGGCTTCCTG ATGACGAGTTGCAGCTCCAGCTCTTTCCTGCAGGAGTTTTTCGAGGGGCA AGAAAATCTTGACAAAGAGAAAGCACGCGAAGCGGGGGGAGGGGGGGAGT CGACTCTACCTCTGGATCTCAGTTTCAGCGGGAGCCTCTTCTCCTCGTCA GTGCAGTGGCCCCAGACGCCCCCCTCGGCTGCAAATGTTAAGCGCAGTTC GCCGTCGGAGAGTGAGGATGAGAGCCAGGCCATGGCGGGCAAGAAAAACT TACAGCATTGCAAAGACGGCACGGATAATGTGGCCTCAGGGCAACATCGT CCTTATAACTCCATGCCTTCCACCTTCATACCTCCTCCTTTTCCTTCGTC CCACACCTCCTCGGGTCAAGTGATGGACCCCACGTCCTCCCATCTTCCCT CCTCATTCTCCCATCTTCCATCTTTGGGCACTGCCGCCGTCGCCCCTGTC TCTGCCATCCCACCACCTATCCGCACAAAAGGGGAGCTGACTGCCGCTTT CTCCGACGCGTCATCGAAGCAGCACCAATCCAACCCTTCACTTCCGGTCT GCCTGGATACTTCTGCTGATCTCAAGGAAGATGGTGGAAATGCTTCCACC CCCATTCCTATTTCTTTTCCCTTCGATATGGACCTGCTCTTTGCCTCTGG ATTGGTCGATAGCAATCAGCATCTCTCTATCCCTCCTTTTGCATCTGCCC CTTCCTACACGCCTTTCCTTGCAGCGTCCACAATGCAGCCCGTGAAAGGG GAGCCAACAAAGGAAACGGAACCGGAACAAACGATCGATGAAGGAGAAAA AATTGGGAAAGAGGAAGGGAAGAAGGGAAGAGAAAATCTTTTTTGCGCCC TCACCCCTATCTCCGCAGCGACCACACTCCCCGGCAGTGGTTCTTCCCTG TCTTCATGTGGTACCAGAGGGGAACAAGGAGCAGGGTTGGCTTTTTCCTT CTCGTCCGCTACAGGTGGAAGTGGGCAGCAACAGGCATCAAAGAAGCTTG TACCCCCATCTCTCAACCCTGCTTTGGCTCCCTTCGCCCCGCTCCCTACT CCAGAGCAACATGCCAAAAGCATCAATCAGATCCGGGGTAATGATGCATA TCCCTCCTTTTTCCCGCCCTCCTATGCATCGTATGCATTACCGAATGCTT ATGGAGGCATGAGCATTGATTCTCTCGGTTCTCTGGCTTCCACGCCGTCC TCTGTTCCTCTCTCCTTCCCACCCTTTCATCTGCCTCCGCTACTTCCTTC ATTCCTGAATGGGTCTACGTCTTCTTCCTCCTGCTTACCCGTCAATTTTT CTTTCGCGCCAAAAAAGCCTTGGGGTCAAGAAACAGCAAGAGATGGCGGC AGCAAGCGAGGTCGAGCAGAGGAGGAAGAAAGTGCGGCAAGTACCAAAAA GCATAAAAATGACAACGCATGAGAATATCGTCCAAATGAGGAAGGAACGT ATTGACAGGATTACGGGGACTTTCACTCCAACAAAATTATCAAGACCCCA TAAACAGCTAGAGGGGAAATAAAGGTTTGAGAGACTGAGGACAATGGAAT GCGTCGAGAATGATCATAGACATTTTCAAAGCGCTTTCTCAACCCATATA AAAAGGGAATCAGGGAGATTCATCTCTCGTGGAAACTGGGAGACGTCTTG GGACGCTTCAGGCGGAAGGTATTACCAGACTTTAGTGCATATAAGGAACT AGTTTGTACGTATGAAAGAAGAAAGAATTCGTATTTTGTAATCTTCATGA AATATTGCGTGTTGAGTCGGAAAATAGCATTTGATCTCAGCTCGGACACT CGACCGCGAGGGTAGAAGTGGAGGCCAAATATGATGTGGAATTGTACGCA GCACCGATCGCCCATCATTCCATAGGTGCACTGTGTCACAAGGGAAGAAA TATGCGATGCATTTCTTTGAAGAGAGTGCACAGGCTCGTCCATTCTACCT ATATGTGATTTGAGGAGCAAGTCAGAGCCTAGGAATAAAAAGAAAAGGGT TCAAATAAAAGATGAACGATATCAGATACT back to topprotein sequence of rna4604 >rna4604-protein ID=rna4604-protein|Name=rna4604|organism=Nannochloropsis gaditana|type=polypeptide|length=523bp MAGVGKIEAWVRENVARLLCMDVNDSEELAACVLAMPCATDKEEREIKQL IKEFLGSSAEVETFSTEVVQRRRRPGEGVPVTERADEAKGGTQAGSDIDR GGKSGKRQNAKEERGEMMKPPGKAVRDTTAQEEAEDDFWGTLSSTSLHRS DAASACGGRQDNSTSGKRQGRMEDKAKSQSRESERVRKGKNQGGGGRAVP AASGGGRDVVCRQPLTASPTDDFAYQPSIMARPAPFPCRCMGTCHTPLGN CLRCGKVICSKEGWTICSFCKTDLTNPANGYRSRPPILLRSLAARGKLAV ENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTS GNMAWMDEKECEEEERREEERREKASGRRGPMELSIDLAGRRVFLQDSGI DTGKEESDAGRIGTNEAAEEVARLAWELSTSGTLEGNYDREGARKGKSGV SRLSGRAREVFEGLHAHFGRIKSSNYAKEREKRQGHPEGEDAEPKAETFS SRSRVQTTSDRLHDDEEMEIEDL back to topmRNA from alignment at CM002463.1:1017690..1020318- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4604 ID=rna4604|Name=rna4604|organism=Nannochloropsis gaditana|type=mRNA|length=2629bp|location=Sequence derived from alignment at CM002463.1:1017690..1020318- (Nannochloropsis gaditana) TTGCTCCTAACCCTTTGCTCACACGCGGTAACACGCGCAAGCAGCTAGAT
GCCTTGCCGTTCTGTTGATGAGAATATTCACGACTATGGTTATGTTCATA
TCTACAGTTCTCAAAATGAGACAAATGGACGTTTTGATACTGGCTGGAGG
GCCTTGGTAAATCCAAACGACTCACGAGCTTCTTCGATTACAAATAGACA
GTGTTTGTCACCACTTTAATGCTTCGACGGCCCCATTACTCGGCTGTACT
CTGGTCTGACACGATTTTAAATCGCTGCTCTGCTCCTTCCCTCTTCCAAT
TCGCTGTTGTCCGAGGTAGCCACCGTACTCTTGGCACTGCCAGCGCACCC
GCTCTAGCTGCTCGTCTGGCGCTCAACCATTCTACACACGTAGAAGGCCT
GCTACCCGTGCTTCGCCGTGTAATTGCTGCCTACGGCCCGCCAGAAATTC
ATACTGTAGTTCCTGGGCGTTTGGCTGTTACCCGTGGGAAGGCAAATCAC
TTTCGAATACGAATCAGTGCCCCCACTCCACAGGGATACAAGGCGTTAGT
GCGACGAGGACGGACGGTGCAAGAAGTTTTCTTCACTGGATCTATCGACC
AGACAGCTTTGCAGCGAGCCTTAGACGTGGCCACGCAAAAGGAGCTAGGG
CGCTTATAAGTGACCACACCTTAATCAAGATCCTTCCCGGAGTTAGGGGT
TCGGTAAGGCTCGATTCATTTTTGGTCCCAAGAGTGGTGCGCAGTATAGG
GGGTATTTGCATCGATATAGAAGTCTTGAAGAAAACGTCAACGAGAGTAT
AATGTCACTGGCCTGGAAGGAGAGATAGACTTCTCAGCCAAACTCGTTCG
GTGTCACCCTTGTTCAGCCCTCCTCATGACTACCGCCTCAAATAATCCCT
GCTATCTATCTCTCAGTCTCCAGGGCCTGACCATTAAGCACTCAAACATC
ACTTCATAGCACAGTGAGCGATCTAATGGCAGGAGTCGGTAAGATTGAGG
CCTGGGTCCGAGAAAATGTAGCACGTCTGCTCTGCATGGACGTGAATGAC
TCGGAGGAGCTGGCGGCGTGTGTGCTGGCCATGCCCTGCGCCACTGACAA
AGAAGAGAGGGAGATCAAGCAGCTAATAAAAGAGTTTTTGGGAAGCTCTG
CGGAAGTTGAAACATTTTCCACAGAGGTGGTGCAGAGAAGGAGACGTCCA
GGGGAAGGAGTTCCCGTCACGGAACGGGCCGACGAAGCGAAGGGGGGAAC
GCAAGCAGGCAGCGACATAGATCGCGGAGGGAAAAGTGGTAAACGCCAAA
ATGCTAAGGAAGAAAGGGGAGAAATGATGAAGCCTCCTGGGAAGGCTGTG
CGTGACACGACCGCGCAGGAAGAGGCGGAGGATGATTTTTGGGGCACTCT
CTCGTCTACTTCACTTCATCGTTCCGATGCTGCTTCTGCCTGTGGTGGGC
GTCAAGACAACAGTACGTCAGGCAAAAGGCAAGGTCGTATGGAAGACAAG
GCAAAATCACAGAGCAGGGAAAGCGAAAGGGTGAGAAAGGGAAAAAATCA
AGGAGGGGGAGGACGAGCAGTCCCTGCTGCTAGCGGCGGAGGCAGGGATG
TGGTCTGCAGGCAGCCCCTAACTGCTTCTCCTACTGACGATTTCGCCTAT
CAGCCTTCAATCATGGCCCGTCCCGCACCTTTTCCATGTCGCTGCATGGG
TACTTGTCACACCCCTCTCGGGAATTGCTTGCGGTGCGGTAAAGTGATAT
GCTCCAAGGAGGGATGGACAATCTGCTCGTTTTGTAAGACAGACCTGACT
AATCCCGCTAATGGTTATCGCTCTCGTCCTCCGATCCTTTTGCGTTCGCT
CGCCGCAAGGGGCAAGCTAGCGGTGGAAAATGAGAGTAAGGAAGTGAGGG
AGGACGTGAAGGACGGCAGTGAACGCGCCGACGAGATGCGGGATCGGTTG
TTGGTGTTCGATTTGAGCATGGCCGAGCGCACAAAAGTCTACGACGACCA
AGCGGATTACTTCCCGGGAACGTCGGGGAACATGGCCTGGATGGACGAAA
AAGAGTGTGAGGAGGAGGAACGGCGGGAGGAAGAGAGGAGAGAGAAAGCG
AGCGGAAGGAGGGGCCCCATGGAGTTGAGCATAGATCTGGCAGGTAGGAG
GGTTTTCCTACAAGATAGTGGGATCGATACTGGCAAAGAGGAGTCGGACG
CAGGCAGGATTGGTACAAATGAAGCGGCGGAAGAAGTTGCCAGATTAGCG
TGGGAATTGAGTACGAGCGGGACGTTGGAGGGAAACTACGATAGGGAAGG
AGCAAGGAAGGGAAAATCAGGGGTGTCGAGGCTGAGTGGGCGAGCACGAG
AGGTTTTTGAGGGTTTGCACGCGCATTTTGGGCGCATCAAATCTAGTAAT
TATGCGAAGGAAAGAGAAAAGAGGCAAGGGCACCCGGAAGGGGAGGATGC
TGAACCGAAAGCCGAAACTTTTTCCTCGCGCAGCCGCGTACAGACGACGT
CTGATAGATTACATGATGATGAGGAGATGGAAATCGAGGACTTGTAACTG
CAACTAACGGAAGGATACAAAAAGGGTATGTCTACAACGAGACTCTCTAG
GAAAAGCCAATTTGTGCGATAGTATCTGA back to topCoding sequence (CDS) from alignment at CM002463.1:1017690..1020318- >rna4604 ID=rna4604|Name=rna4604|organism=Nannochloropsis gaditana|type=CDS|length=1572bp|location=Sequence derived from alignment at CM002463.1:1017690..1020318- (Nannochloropsis gaditana) ATGGCAGGAGTCGGTAAGATTGAGGCCTGGGTCCGAGAAAATGTAGCACG TCTGCTCTGCATGGACGTGAATGACTCGGAGGAGCTGGCGGCGTGTGTGC TGGCCATGCCCTGCGCCACTGACAAAGAAGAGAGGGAGATCAAGCAGCTA ATAAAAGAGTTTTTGGGAAGCTCTGCGGAAGTTGAAACATTTTCCACAGA GGTGGTGCAGAGAAGGAGACGTCCAGGGGAAGGAGTTCCCGTCACGGAAC GGGCCGACGAAGCGAAGGGGGGAACGCAAGCAGGCAGCGACATAGATCGC GGAGGGAAAAGTGGTAAACGCCAAAATGCTAAGGAAGAAAGGGGAGAAAT GATGAAGCCTCCTGGGAAGGCTGTGCGTGACACGACCGCGCAGGAAGAGG CGGAGGATGATTTTTGGGGCACTCTCTCGTCTACTTCACTTCATCGTTCC GATGCTGCTTCTGCCTGTGGTGGGCGTCAAGACAACAGTACGTCAGGCAA AAGGCAAGGTCGTATGGAAGACAAGGCAAAATCACAGAGCAGGGAAAGCG AAAGGGTGAGAAAGGGAAAAAATCAAGGAGGGGGAGGACGAGCAGTCCCT GCTGCTAGCGGCGGAGGCAGGGATGTGGTCTGCAGGCAGCCCCTAACTGC TTCTCCTACTGACGATTTCGCCTATCAGCCTTCAATCATGGCCCGTCCCG CACCTTTTCCATGTCGCTGCATGGGTACTTGTCACACCCCTCTCGGGAAT TGCTTGCGGTGCGGTAAAGTGATATGCTCCAAGGAGGGATGGACAATCTG CTCGTTTTGTAAGACAGACCTGACTAATCCCGCTAATGGTTATCGCTCTC GTCCTCCGATCCTTTTGCGTTCGCTCGCCGCAAGGGGCAAGCTAGCGGTG GAAAATGAGAGTAAGGAAGTGAGGGAGGACGTGAAGGACGGCAGTGAACG CGCCGACGAGATGCGGGATCGGTTGTTGGTGTTCGATTTGAGCATGGCCG AGCGCACAAAAGTCTACGACGACCAAGCGGATTACTTCCCGGGAACGTCG GGGAACATGGCCTGGATGGACGAAAAAGAGTGTGAGGAGGAGGAACGGCG GGAGGAAGAGAGGAGAGAGAAAGCGAGCGGAAGGAGGGGCCCCATGGAGT TGAGCATAGATCTGGCAGGTAGGAGGGTTTTCCTACAAGATAGTGGGATC GATACTGGCAAAGAGGAGTCGGACGCAGGCAGGATTGGTACAAATGAAGC GGCGGAAGAAGTTGCCAGATTAGCGTGGGAATTGAGTACGAGCGGGACGT TGGAGGGAAACTACGATAGGGAAGGAGCAAGGAAGGGAAAATCAGGGGTG TCGAGGCTGAGTGGGCGAGCACGAGAGGTTTTTGAGGGTTTGCACGCGCA TTTTGGGCGCATCAAATCTAGTAATTATGCGAAGGAAAGAGAAAAGAGGC AAGGGCACCCGGAAGGGGAGGATGCTGAACCGAAAGCCGAAACTTTTTCC TCGCGCAGCCGCGTACAGACGACGTCTGATAGATTACATGATGATGAGGA GATGGAAATCGAGGACTTGTAA back to top
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