Naga_100014g62, gene4422 (gene) Nannochloropsis gaditana

Overview
NameNaga_100014g62
Unique Namegene4422
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:967239..970669 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100014g62
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:967239..970669 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00620NO06G00620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4584rna4584-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4583rna4583-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4584rna4584Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4583rna4583Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4584

>rna4584-protein ID=rna4584-protein|Name=rna4584|organism=Nannochloropsis gaditana|type=polypeptide|length=428bp
MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARK
VTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRP
ALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGV
VEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQG
WIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVV
GWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKS
DMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYH
TCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPI
YNIRQDKVDRALRFFYREGPESHEVLLL
back to top

protein sequence of rna4583

>rna4583-protein ID=rna4583-protein|Name=rna4583|organism=Nannochloropsis gaditana|type=polypeptide|length=500bp
MTSLPCASRPLSRVVGKTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQ
ASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHS
LDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPT
YAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRG
TYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVF
CAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFW
QGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVS
GKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYIL
HCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGL
NPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL
back to top
Synonyms
Publications