Naga_100025g57, gene4280 (gene) Nannochloropsis gaditana

Overview
NameNaga_100025g57
Unique Namegene4280
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:584529..585367 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100025g57
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:584529..585367 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005515protein binding
GO:0030234enzyme regulator activity
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0006412translation
GO:0009056catabolic process
GO:0042221response to chemical
GO:0007165signal transduction
GO:0016043cellular component organization
GO:0006464cellular protein modification process
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
GO:0009719response to endogenous stimulus
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005730nucleolus
GO:0005840ribosome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02310NO06G02310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4436rna4436-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4436rna4436Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4436

>rna4436-protein ID=rna4436-protein|Name=rna4436|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MSSKRGRGGTTGAKFRTTLGLPVAAVINCADNTGAKNLHIIAVGGVKGRL
NRLPQASLGDMVMASVRKGKPELRKKKRWDFHLFRGQRWSHRQQQGGDEG
VGHHRPCGEGMRGPVASYRLQLWHDCLKPRTVLCHEYPEWAGGMSSISDY
LRRKKRHLANEQRGLVDTFPSDLSALRRTRLRGSAKIWSG
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Synonyms
Publications