Naga_100141g4, gene4000 (gene) Nannochloropsis gaditana

Overview
NameNaga_100141g4
Unique Namegene4000
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1000503..1002874 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100141g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1000503..1002874 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4157rna4157-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4156rna4156-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4157rna4157Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4156rna4156Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4157

>rna4157-protein ID=rna4157-protein|Name=rna4157|organism=Nannochloropsis gaditana|type=polypeptide|length=404bp
MADRPMQQSHTTALPDFVEETDLALSRFGGRICFATDDWFAAAENLLDHE
EPIFIPDKFTAYGKWMDGWETRRKRTAGHDWCIIKLAFPGRILGVGVDTS
FFTGNYVPRCSIQAASYIDDNEPIALQKLAAARTEVPGGDKIGSKASEEE
MTLAASVHSDSWETILPFTPLGAGYKDTCHNYFAIEATERFTHLRLNMFP
DGGIARLRVYGIVARAWHLVPATQVVDLAAVENGGKAIGCSDKHYGHPRN
LINPGRGINMGDGWETARKLTRPPVLEPDEGGLIKVPGSDWAVLRLGTPG
KVRELEIDTCWFKGNYPESCQVEAVELPLDMSNEDVHKAQELGEVPWRIL
LPRTKLGADQQAYFDVGAEGGRAEAGGAVTHLKLTIYPDGGISRVRARGT
KVEV
back to top

protein sequence of rna4156

>rna4156-protein ID=rna4156-protein|Name=rna4156|organism=Nannochloropsis gaditana|type=polypeptide|length=404bp
MADRPMQQSHTTALPDFVEETDLALSRFGGRICFATDDWFAAAENLLDHE
EPIFIPDKFTAYGKWMDGWETRRKRTAGHDWCIIKLAFPGRILGVGVDTS
FFTGNYVPRCSIQAASYIDDNEPIALQKLAAARTEVPGGDKIGSKASEEE
MTLAASVHSDSWETILPFTPLGAGYKDTCHNYFAIEATERFTHLRLNMFP
DGGIARLRVYGIVARAWHLVPATQVVDLAAVENGGKAIGCSDKHYGHPRN
LINPGRGINMGDGWETARKLTRPPVLEPDEGGLIKVPGSDWAVLRLGTPG
KVRELEIDTCWFKGNYPESCQVEAVELPLDMSNEDVHKAQELGEVPWRIL
LPRTKLGADQQAYFDVGAEGGRAEAGGAVTHLKLTIYPDGGISRVRARGT
KVEV
back to top
Synonyms
Publications