Naga_100001g10, gene3947 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g10
Unique Namegene3947
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:855413..857346 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:855413..857346 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01010NO08G01010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4101rna4101-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4102rna4102-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4101rna4101Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4102rna4102Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4101

>rna4101-protein ID=rna4101-protein|Name=rna4101|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MMENDLSIEPSCPPQFVASIEGNQALERDHRIRRQHIHRKISCFLQDCRC
EDRLSLARPLFKKSPRWKNKHFKCQLCPRKLTSASGMVIHVTQVHKETLK
KIPGAKEGRDSVDVEVFGMQGIPMECLMERAAKKQRTGGDPGGSHGEANG
GGMPGLPPGMGPGMGMGAGFPPGMGGPPGPNGMYGQMPNFPPQQGGVFGG
YGMGGFPPRPMSGPPGMFPPAGRMMMPHQGGMPPGMYPFPPGQQAPQGFP
RSQPGMPPLPALGSAPLGPGGYVPGQHQQQQHSTQEPRHPHQAPQPSQPG
QSSPSQPHHQQHPQHYQPQQPQPYQQGIPPMPPGQAPPRPGVFPPGPPPG
LPPGAPPRPLFPVAGFAPAPPATSSPTVSAAPSGTQHPATETTAVATKEM
NLVYAEESESMEERRAKLPKYFYDEKVVLAGSGS
back to top

protein sequence of rna4102

>rna4102-protein ID=rna4102-protein|Name=rna4102|organism=Nannochloropsis gaditana|type=polypeptide|length=426bp
MNIAIPTSFHLILTFISFVWLYQRTLYAMSRKISCFLQDCRCEDRLSLAR
PLFKKSPRWKNKHFKCQLCPRKLTSASGMVIHVTQVHKETLKKIPGAKEG
RDSVDVEVFGMQGIPMECLMERAAKKQRTGGDPGGSHGEANGGGMPGLPP
GMGPGMGMGAGFPPGMGGPPGPNGMYGQMPNFPPQQGGVFGGYGMGGFPP
RPMSGPPGMFPPAGRMMMPHQGGMPPGMYPFPPGQQAPQGFPRSQPGMPP
LPALGSAPLGPGGYVPGQHQQQQHSTQEPRHPHQAPQPSQPGQSSPSQPH
HQQHPQHYQPQQPQPYQQGIPPMPPGQAPPRPGVFPPGPPPGLPPGAPPR
PLFPVAGFAPAPPATSSPTVSAAPSGTQHPATETTAVATKEMNLVYAEES
ESMEERRAKLPKYFYDEKVVLAGSGS
back to top
Synonyms
Publications