Naga_100001g71, gene3889 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g71
Unique Namegene3889
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:688623..691510 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g71
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:688623..691510 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL139ngnoL139Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01670NO08G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4043rna4043-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4043rna4043Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4043

>rna4043-protein ID=rna4043-protein|Name=rna4043|organism=Nannochloropsis gaditana|type=polypeptide|length=841bp
MRKGWSKAPLLCTQWPPGTAKSSSAALLPSLLLRALSTTPASAYPPPSPP
SPAAVRPVGIENIGAPRPVGSKRKRRLVNRMPDGSSQQLGRWERVVPASS
RMIEYLKSSEMKGVSVDSTSKILHANASSTLTSALQLARFYLQRRDFKAA
QELLFALQDGHLGPPSARKIPSVLIRPLLKQLVEGQVEAQEAGLAVESAK
RMVRAGGDLSPTVLVGLLRACRGSRMELLAPLWAERQPEWAGNQSICLAL
LEALGAYAQEGTVPVSWSSLPHVDEVWRALCAHGPPPPSAYALRIMGLAA
SAKAAGTAGDVGKGQSEIPHTLRMAVRDFAAENEEPLQRGQVLRAAVETL
LQVGGKAEDVADVLEVLAPPAGGAVDGKLHAALLRFLPPSRLDALQVLWD
HACRSLGPAQNPPLGLRLAFCRHALHSPSRALVKQGLSLLRTPPVLSTPP
HPASPGRSSSQSDGQAAGDLDMGDVTAVLEALCGQSRVVEARALQDALQR
FLPSPLPAPLARALLKCAALEGRPGRAIACLHRLKGEDVRENEGGGRGED
VTEPSDYEAALLALRRVQRSSATVRERELVENPLGFLAWALDDAGTSTVE
RRAGGPVLTPQATLVALQILRRACETSAETGRAERREAFVQRAVALVSKL
AAAGQETDDTLCEEMVGVAVWGGSLHRAVEVVREMEKTRAAPASLARAQT
LLIISLARRGDVGAAEEWLVRMNTLTGHGPSEQVLDAFAEAYAGDRDLSS
GLSMLQSCFNQYGNRPSVAAFRHLFELCLAMDGQGDLFEAQRALTIAEQL
WPGGEGPGVGGGLVEDMKERFKEVRESSFSIDEARGDASPV
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Synonyms
Publications