TPI, gene3879 (gene) Nannochloropsis gaditana

Overview
NameTPI
Unique Namegene3879
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:672545..674661 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g84
Gene biotypeprotein_coding
GeneTPI
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:672545..674661 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0009058biosynthetic process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL139ngnoL139Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01800NO08G01800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4033rna4033-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4033rna4033Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4033

>rna4033-protein ID=rna4033-protein|Name=rna4033|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MSTSKAWAEYLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIP
LEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLL
KDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEK
LEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATP
EQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDG
FLVGGASLTSDFVTIIRAVKSP
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Synonyms
Publications