NO08G01800, NO08G01800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_005854446.1 (triosephosphate isomerase (TIM) [Nannochloropsis gaditana CCMP526] >EKU21912.1 triosephosphate isomerase (TIM) [Nannochloropsis gaditana CCMP526] >EWM26658.1 triosephosphate isomerase [Nannochloropsis gaditana]) HSP 1 Score: 475.7 bits (1223), Expect = 9.600e-131 Identity = 237/271 (87.45%), Postives = 254/271 (93.73%), Query Frame = 0 Query: 1 MSSSQGWAQYLARGVPPQKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272 MS+S+ WA+YLARGVPPQKRYLIGGNWKANGTLAQ AGIVK LN GG PLEAEVVIAPPAHLLG+VKDN+RPDVAVSAQNSALTTK GAFTGELPA LLKDFGLNW IIGHSERREGFGGPGE+DEVVATKTKVAVDAGLHVMACVGEKLEQREAG+TTEVVL QL+AIASKL + DWSKVV+AYEPVWAIGTGKVATPEQAQ+VH SIRAF+ EK+GA A+L+RIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDF+TII+A KS Sbjct: 1 MSTSKAWAEYLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKS 271
BLAST of NO08G01800 vs. NCBI_GenBank
Match: CEM14871.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 297.4 bits (760), Expect = 4.700e-77 Identity = 147/247 (59.51%), Postives = 184/247 (74.49%), Query Frame = 0 Query: 23 IGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAA 270 IGGNWK NGT A +VK LN GG FP + EVV+APPA +G+V+D++R D++VS QN L GA+TGEL ++KDFG+NW I GHSERREGFG GE+ E+VA KTK A++ GL V+ CVGEK E+REAG+T +V+ +Q+ A+ ++L+ SDWS VVVAYEPVWAIGTG ATP+QAQD A IR ++ + I A+ RIIYGGSVK +A L +PDIDGFLVGGASLTSDFI II A+ Sbjct: 64 IGGNWKCNGTKKSVADLVKLLNEGGNFPDKVEVVVAPPALHVGYVQDSIRKDISVSTQNVGLPKAYGAYTGELSGNMIKDFGVNWCITGHSERREGFGMAGESSELVAKKTKAALEQGLKVIPCVGEKKEEREAGKTMDVISEQMKALVAELSPSDWSNVVVAYEPVWAIGTGLTATPQQAQDTQADIRKWMADNISPEVAASTRIIYGGSVKAGNAAELFAEPDIDGFLVGGASLTSDFIAIINAS 310
BLAST of NO08G01800 vs. NCBI_GenBank
Match: CBJ32973.1 (Triosephosphate isomerase [Ectocarpus siliculosus]) HSP 1 Score: 288.1 bits (736), Expect = 2.800e-74 Identity = 143/253 (56.52%), Postives = 187/253 (73.91%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLK-QLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAK 271 +++LIGGNWK NGT A +V+ LN GG FP AEVV+APP+ L VKD +RPD+ VS QN + GA+TGEL A+++KDFG+ W I GHSERR GFG GE+ +++A K+KVA+D GL+V+ C+GE L REA QT E+VL+ ++A L ++DWS+VVVAYEPVWAIGTG A+P QAQ+VH++IRA++ EK+ + A +RIIYGGSVK S+A L PDIDGFLVGGASL DF+ II+A + Sbjct: 3 RKFLIGGNWKCNGTRENVAALVEVLNEGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVRPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCAGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLEEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVGEKVSPAVAESLRIIYGGSVKSSNAAELATCPDIDGFLVGGASLKPDFVDIIKAVE 255
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_002181761.1 (isomerase triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1] >EEC46975.1 isomerase triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 277.3 bits (708), Expect = 5.000e-71 Identity = 135/252 (53.57%), Postives = 177/252 (70.24%), Query Frame = 0 Query: 18 QKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAA 270 +++YL+ GNWK NGTLA +VKT N GP P EV I P+ L + ++R D+ + AQ+ + K GAFTGE+ A +KD G +W IIGHSERREGF PGET ++ A KT+VA+DAGL VM C+GEK EQRE G T +V QL +A+ LT+SDWS + +AYEPVWAIGTG ATPE AQ+ HASIR ++++ + A A VRI YGGS+KG++A L+ +PDIDG L+GGASLT+DF ++ A Sbjct: 15 ERKYLVAGNWKCNGTLASNEELVKTFNEAGPIPSNVEVAICCPSVYLPQLLSSLRDDIQIGAQDCGVNDKNGAFTGEIGAFQIKDIGCDWVIIGHSERREGFEMPGETPDLCAKKTRVAIDAGLKVMFCIGEKKEQREDGTTMDVCASQLEPLAAVLTESDWSSIAIAYEPVWAIGTGLTATPEMAQETHASIRDWISQNVSADVAGKVRIQYGGSMKGANAKDLLEQPDIDGGLIGGASLTADFFNVVNGA 266
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_002295570.1 (triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335] >ACI64287.1 triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 271.2 bits (692), Expect = 3.600e-69 Identity = 137/263 (52.09%), Postives = 177/263 (67.30%), Query Frame = 0 Query: 12 ARGVPP---QKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272 ++G P +++YLIGGNWK NGT+A I+ N GP P AEVVI PA + ++R D+ ++AQN +L T GA+TGE+ A+ LKD G+ W I+GHSERREGFG GE E+VA KTK A++ GL VM C+GEK E+REAG T +V QL A L+K DW+ V +AYEPVWAIGTG ATPE AQ+ HA+IRA++ E +G A VRI YGGS+KG++A L+ + DIDG L+GGASLT DF + S Sbjct: 14 SKGTPAPEGERKYLIGGNWKCNGTIASLEKIISEFNAAGPIPANAEVVIGCPAMHIPIALMSLRDDIEIAAQNCSL-TGCGAYTGEIAASQLKDMGVTWVILGHSERREGFGMAGEDSELVAKKTKKAIEEGLKVMFCIGEKKEEREAGTTMDVCASQLKPAADILSKEDWANVSIAYEPVWAIGTGLTATPEMAQETHANIRAWVAENVGQDVADAVRIQYGGSMKGANAADLLAQADIDGGLIGGASLTMDFFNCVNGVPS 275
BLAST of NO08G01800 vs. NCBI_GenBank
Match: GBG34141.1 (Triosephosphate isomerase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 267.3 bits (682), Expect = 5.200e-68 Identity = 140/253 (55.34%), Postives = 174/253 (68.77%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272 K+ +IGGNWK NGT +++TLN G FP AEVV+AP A LG D +R D++VS QN KAGA+TGEL L+KDFG+NWAI+GHSERR GET E+V TK K+A++AG+ VMAC+GE+L REA +T +V +QL I + + +VV+AYEPVWAIGTG ATPEQAQ+ H IRA+L KIG AA VRIIYGGSVKG++ LI K DIDGFLVGGASL +F II + + Sbjct: 4 KKVVIGGNWKCNGTKESVKELIETLNSAGDFPSNAEVVVAPTALHLGMAVDGLRKDISVSVQNLWKEPKAGAWTGELTVDLIKDFGINWAILGHSERR---AYCGETPEIVGTKVKIALEAGMKVMACIGEQLSDREADKTMDVCKEQLDPIIAAVPSGAMDRVVIAYEPVWAIGTGVTATPEQAQETHEQIRAYLKTKIGEEAAQGVRIIYGGSVKGANCQELIKKADIDGFLVGGASLKPEFKDIIACSSA 253
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_009040025.1 (hypothetical protein AURANDRAFT_72255 [Aureococcus anophagefferens] >EGB05380.1 hypothetical protein AURANDRAFT_72255 [Aureococcus anophagefferens]) HSP 1 Score: 265.4 bits (677), Expect = 2.000e-67 Identity = 138/251 (54.98%), Postives = 178/251 (70.92%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVL-KQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQA 269 K+YLIGGNWK NGT A A +VKTLN GP P EVV+ P+ +G V +R D+AV+AQ+ + T GA+TGEL A +L DFG+ W I+GHSERR E+ +VATKTK A+DAGL VM CVGE LE+REAG+ VVL + A+ K + ++W+K+ +AYEPVWAIGTGK ATP+QAQ+VHASIR +L + + A RI YGGS+KG++A GL+ +PDIDG L+GGASL ++FIT I A Sbjct: 11 KKYLIGGNWKCNGTKASTAALVKTLNEAGPIPAWVEVVVGVPSVHIGSVLATLRQDIAVAAQDCS-ATGDGAYTGELSAGMLADFGVKWVIVGHSERRT---NQKESSALVATKTKAALDAGLSVMVCVGETLEEREAGKIDAVVLDDHMGALKGKFSDAEWAKIAIAYEPVWAIGTGKTATPDQAQEVHASIRKWLAANVNEAVAKATRIQYGGSMKGANAEGLLKQPDIDGGLIGGASLKAEFITGIAA 257
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_003145182.1 (triosephosphate isomerase [Loa loa] >EFO18888.1 triosephosphate isomerase [Loa loa]) HSP 1 Score: 264.6 bits (675), Expect = 3.400e-67 Identity = 137/250 (54.80%), Postives = 176/250 (70.40%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQA 269 +++L+GGNWK NG A I+K LN G P +VV+APPA L +VK+ V+ + VSAQN K GAFTGE+ A++KD GL+W I+GHSERR F GE+DE++A K A+++GL + C GEKL++REAG+T +V +QL A+ K K+DW+K+V+AYEPVWAIGTGK A+PEQAQ+VH IR FL EK+ A A+ RI+YGGSV +A L KPDIDGFLVGGASL DFI II A Sbjct: 3 RKFLVGGNWKMNGDKASVDSIIKFLNDGAVVP-NVDVVVAPPAPYLSYVKEKVKSGIEVSAQNCYKVAK-GAFTGEISPAMIKDLGLHWVILGHSERRHIF---GESDELIAEKVVHAIESGLQTIFCCGEKLDEREAGKTKDVNFRQLQAVIDK--KADWAKIVIAYEPVWAIGTGKTASPEQAQEVHGWIREFLKEKVSADVAANTRILYGGSVTAENAADLAKKPDIDGFLVGGASLKPDFIKIIHA 245
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_009048158.1 (hypothetical protein LOTGIDRAFT_238326 [Lottia gigantea] >ESP01108.1 hypothetical protein LOTGIDRAFT_238326 [Lottia gigantea]) HSP 1 Score: 263.1 bits (671), Expect = 9.800e-67 Identity = 140/255 (54.90%), Postives = 176/255 (69.02%), Query Frame = 0 Query: 18 QKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGEL-PAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272 Q+++ +GGNWK NG GI+K LN GP EVV++PPA L +V+ + +VA SAQN K GAFTGE+ AA+ KD G W I+GHSERR F GE DE++ KTK ++ GL V+AC+GEKLE+RE+ QT EVV +Q SA A+ + SDWSKVV+AYEPVWAIGTGKVA+PEQAQ+VHAS+R +L + + A A RIIYGGSV + L KPD+DGFLVGGASL DF+ II A K+ Sbjct: 4 QRKFFVGGNWKLNGDKQSVDGIIKFLN-DGPLDENTEVVVSPPAIYLDYVRGKLNNNVATSAQNCYKVAK-GAFTGEIVSAAMAKDVGATWIILGHSERRHVF---GECDELIGQKTKYVLEEGLGVIACIGEKLEERESNQTNEVVFRQTSAFAANI--SDWSKVVLAYEPVWAIGTGKVASPEQAQEVHASLRKWLADNVSAEVAQKTRIIYGGSVSAGNCKELGTKPDVDGFLVGGASLKPDFVQIINARKA 251
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_001897269.1 (triosephosphate isomerase [Brugia malayi] >CDQ04840.1 BMA-TPI-1 [Brugia malayi]) HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66 Identity = 138/250 (55.20%), Postives = 174/250 (69.60%), Query Frame = 0 Query: 19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQA 269 +++L+GGNWK NG A I+K LN G P +VV+APPA L +VK+ V+ + VSAQN K GAFTGE+ A++KD GL+W I+GHSERR F GE+DE++A K AVD+GL + C GEKL++REAG+T V +QL A+ K K++W+K+V+AYEPVWAIGTGK A+PEQAQ+VH IR FL EK+ A A RI+YGGSV +A L KPDIDGFLVGGASL DFI II A Sbjct: 3 RKFLVGGNWKMNGNKASVDNIIKFLNDGAVVP-NVDVVVAPPAPYLSYVKEKVKNGIEVSAQNCYKVEK-GAFTGEISPAMIKDLGLHWVILGHSERRHIF---GESDELIAEKVLHAVDSGLQTIFCCGEKLDEREAGKTKAVNFRQLQAVIDK--KANWNKIVIAYEPVWAIGTGKTASPEQAQEVHGWIREFLKEKVSADVAQKTRILYGGSVTAENAAELAKKPDIDGFLVGGASLKPDFIKIIHA 245 The following BLAST results are available for this feature:
BLAST of NO08G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01800 ID=NO08G01800|Name=NO08G01800|organism=Nannochloropsis oceanica|type=gene|length=1373bpback to top protein sequence of NO08G01800.1 >NO08G01800.1-protein ID=NO08G01800.1-protein|Name=NO08G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top Synonyms
Publications
|