NO08G01800, NO08G01800 (gene) Nannochloropsis oceanica

Overview
NameNO08G01800
Unique NameNO08G01800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1373
Alignment locationchr8:553180..554552 +

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Properties
Property NameValue
DescriptionTriosephosphate isomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:553180..554552 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004807triose-phosphate isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR035990TIM_sf
IPR000652Triosephosphate_isomerase
Homology
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_005854446.1 (triosephosphate isomerase (TIM) [Nannochloropsis gaditana CCMP526] >EKU21912.1 triosephosphate isomerase (TIM) [Nannochloropsis gaditana CCMP526] >EWM26658.1 triosephosphate isomerase [Nannochloropsis gaditana])

HSP 1 Score: 475.7 bits (1223), Expect = 9.600e-131
Identity = 237/271 (87.45%), Postives = 254/271 (93.73%), Query Frame = 0
Query:    1 MSSSQGWAQYLARGVPPQKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272
            MS+S+ WA+YLARGVPPQKRYLIGGNWKANGTLAQ AGIVK LN GG  PLEAEVVIAPPAHLLG+VKDN+RPDVAVSAQNSALTTK GAFTGELPA LLKDFGLNW IIGHSERREGFGGPGE+DEVVATKTKVAVDAGLHVMACVGEKLEQREAG+TTEVVL QL+AIASKL + DWSKVV+AYEPVWAIGTGKVATPEQAQ+VH SIRAF+ EK+GA  A+L+RIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDF+TII+A KS
Sbjct:    1 MSTSKAWAEYLARGVPPQKRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVLSQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAVKS 271          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: CEM14871.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 297.4 bits (760), Expect = 4.700e-77
Identity = 147/247 (59.51%), Postives = 184/247 (74.49%), Query Frame = 0
Query:   23 IGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAA 270
            IGGNWK NGT    A +VK LN GG FP + EVV+APPA  +G+V+D++R D++VS QN  L    GA+TGEL   ++KDFG+NW I GHSERREGFG  GE+ E+VA KTK A++ GL V+ CVGEK E+REAG+T +V+ +Q+ A+ ++L+ SDWS VVVAYEPVWAIGTG  ATP+QAQD  A IR ++ + I    A+  RIIYGGSVK  +A  L  +PDIDGFLVGGASLTSDFI II A+
Sbjct:   64 IGGNWKCNGTKKSVADLVKLLNEGGNFPDKVEVVVAPPALHVGYVQDSIRKDISVSTQNVGLPKAYGAYTGELSGNMIKDFGVNWCITGHSERREGFGMAGESSELVAKKTKAALEQGLKVIPCVGEKKEEREAGKTMDVISEQMKALVAELSPSDWSNVVVAYEPVWAIGTGLTATPQQAQDTQADIRKWMADNISPEVAASTRIIYGGSVKAGNAAELFAEPDIDGFLVGGASLTSDFIAIINAS 310          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: CBJ32973.1 (Triosephosphate isomerase [Ectocarpus siliculosus])

HSP 1 Score: 288.1 bits (736), Expect = 2.800e-74
Identity = 143/253 (56.52%), Postives = 187/253 (73.91%), Query Frame = 0
Query:   19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLK-QLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAK 271
            +++LIGGNWK NGT    A +V+ LN GG FP  AEVV+APP+  L  VKD +RPD+ VS QN     + GA+TGEL A+++KDFG+ W I GHSERR GFG  GE+ +++A K+KVA+D GL+V+ C+GE L  REA QT E+VL+  ++A    L ++DWS+VVVAYEPVWAIGTG  A+P QAQ+VH++IRA++ EK+  + A  +RIIYGGSVK S+A  L   PDIDGFLVGGASL  DF+ II+A +
Sbjct:    3 RKFLIGGNWKCNGTRENVAALVEVLNEGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVRPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCAGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLEEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVGEKVSPAVAESLRIIYGGSVKSSNAAELATCPDIDGFLVGGASLKPDFVDIIKAVE 255          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_002181761.1 (isomerase triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1] >EEC46975.1 isomerase triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 277.3 bits (708), Expect = 5.000e-71
Identity = 135/252 (53.57%), Postives = 177/252 (70.24%), Query Frame = 0
Query:   18 QKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAA 270
            +++YL+ GNWK NGTLA    +VKT N  GP P   EV I  P+  L  +  ++R D+ + AQ+  +  K GAFTGE+ A  +KD G +W IIGHSERREGF  PGET ++ A KT+VA+DAGL VM C+GEK EQRE G T +V   QL  +A+ LT+SDWS + +AYEPVWAIGTG  ATPE AQ+ HASIR ++++ + A  A  VRI YGGS+KG++A  L+ +PDIDG L+GGASLT+DF  ++  A
Sbjct:   15 ERKYLVAGNWKCNGTLASNEELVKTFNEAGPIPSNVEVAICCPSVYLPQLLSSLRDDIQIGAQDCGVNDKNGAFTGEIGAFQIKDIGCDWVIIGHSERREGFEMPGETPDLCAKKTRVAIDAGLKVMFCIGEKKEQREDGTTMDVCASQLEPLAAVLTESDWSSIAIAYEPVWAIGTGLTATPEMAQETHASIRDWISQNVSADVAGKVRIQYGGSMKGANAKDLLEQPDIDGGLIGGASLTADFFNVVNGA 266          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_002295570.1 (triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335] >ACI64287.1 triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 271.2 bits (692), Expect = 3.600e-69
Identity = 137/263 (52.09%), Postives = 177/263 (67.30%), Query Frame = 0
Query:   12 ARGVPP---QKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272
            ++G P    +++YLIGGNWK NGT+A    I+   N  GP P  AEVVI  PA  +     ++R D+ ++AQN +L T  GA+TGE+ A+ LKD G+ W I+GHSERREGFG  GE  E+VA KTK A++ GL VM C+GEK E+REAG T +V   QL   A  L+K DW+ V +AYEPVWAIGTG  ATPE AQ+ HA+IRA++ E +G   A  VRI YGGS+KG++A  L+ + DIDG L+GGASLT DF   +    S
Sbjct:   14 SKGTPAPEGERKYLIGGNWKCNGTIASLEKIISEFNAAGPIPANAEVVIGCPAMHIPIALMSLRDDIEIAAQNCSL-TGCGAYTGEIAASQLKDMGVTWVILGHSERREGFGMAGEDSELVAKKTKKAIEEGLKVMFCIGEKKEEREAGTTMDVCASQLKPAADILSKEDWANVSIAYEPVWAIGTGLTATPEMAQETHANIRAWVAENVGQDVADAVRIQYGGSMKGANAADLLAQADIDGGLIGGASLTMDFFNCVNGVPS 275          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: GBG34141.1 (Triosephosphate isomerase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 267.3 bits (682), Expect = 5.200e-68
Identity = 140/253 (55.34%), Postives = 174/253 (68.77%), Query Frame = 0
Query:   19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272
            K+ +IGGNWK NGT      +++TLN  G FP  AEVV+AP A  LG   D +R D++VS QN     KAGA+TGEL   L+KDFG+NWAI+GHSERR      GET E+V TK K+A++AG+ VMAC+GE+L  REA +T +V  +QL  I + +      +VV+AYEPVWAIGTG  ATPEQAQ+ H  IRA+L  KIG  AA  VRIIYGGSVKG++   LI K DIDGFLVGGASL  +F  II  + +
Sbjct:    4 KKVVIGGNWKCNGTKESVKELIETLNSAGDFPSNAEVVVAPTALHLGMAVDGLRKDISVSVQNLWKEPKAGAWTGELTVDLIKDFGINWAILGHSERR---AYCGETPEIVGTKVKIALEAGMKVMACIGEQLSDREADKTMDVCKEQLDPIIAAVPSGAMDRVVIAYEPVWAIGTGVTATPEQAQETHEQIRAYLKTKIGEEAAQGVRIIYGGSVKGANCQELIKKADIDGFLVGGASLKPEFKDIIACSSA 253          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_009040025.1 (hypothetical protein AURANDRAFT_72255 [Aureococcus anophagefferens] >EGB05380.1 hypothetical protein AURANDRAFT_72255 [Aureococcus anophagefferens])

HSP 1 Score: 265.4 bits (677), Expect = 2.000e-67
Identity = 138/251 (54.98%), Postives = 178/251 (70.92%), Query Frame = 0
Query:   19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVL-KQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQA 269
            K+YLIGGNWK NGT A  A +VKTLN  GP P   EVV+  P+  +G V   +R D+AV+AQ+ +  T  GA+TGEL A +L DFG+ W I+GHSERR       E+  +VATKTK A+DAGL VM CVGE LE+REAG+   VVL   + A+  K + ++W+K+ +AYEPVWAIGTGK ATP+QAQ+VHASIR +L   +  + A   RI YGGS+KG++A GL+ +PDIDG L+GGASL ++FIT I A
Sbjct:   11 KKYLIGGNWKCNGTKASTAALVKTLNEAGPIPAWVEVVVGVPSVHIGSVLATLRQDIAVAAQDCS-ATGDGAYTGELSAGMLADFGVKWVIVGHSERRT---NQKESSALVATKTKAALDAGLSVMVCVGETLEEREAGKIDAVVLDDHMGALKGKFSDAEWAKIAIAYEPVWAIGTGKTATPDQAQEVHASIRKWLAANVNEAVAKATRIQYGGSMKGANAEGLLKQPDIDGGLIGGASLKAEFITGIAA 257          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_003145182.1 (triosephosphate isomerase [Loa loa] >EFO18888.1 triosephosphate isomerase [Loa loa])

HSP 1 Score: 264.6 bits (675), Expect = 3.400e-67
Identity = 137/250 (54.80%), Postives = 176/250 (70.40%), Query Frame = 0
Query:   19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQA 269
            +++L+GGNWK NG  A    I+K LN G   P   +VV+APPA  L +VK+ V+  + VSAQN     K GAFTGE+  A++KD GL+W I+GHSERR  F   GE+DE++A K   A+++GL  + C GEKL++REAG+T +V  +QL A+  K  K+DW+K+V+AYEPVWAIGTGK A+PEQAQ+VH  IR FL EK+ A  A+  RI+YGGSV   +A  L  KPDIDGFLVGGASL  DFI II A
Sbjct:    3 RKFLVGGNWKMNGDKASVDSIIKFLNDGAVVP-NVDVVVAPPAPYLSYVKEKVKSGIEVSAQNCYKVAK-GAFTGEISPAMIKDLGLHWVILGHSERRHIF---GESDELIAEKVVHAIESGLQTIFCCGEKLDEREAGKTKDVNFRQLQAVIDK--KADWAKIVIAYEPVWAIGTGKTASPEQAQEVHGWIREFLKEKVSADVAANTRILYGGSVTAENAADLAKKPDIDGFLVGGASLKPDFIKIIHA 245          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_009048158.1 (hypothetical protein LOTGIDRAFT_238326 [Lottia gigantea] >ESP01108.1 hypothetical protein LOTGIDRAFT_238326 [Lottia gigantea])

HSP 1 Score: 263.1 bits (671), Expect = 9.800e-67
Identity = 140/255 (54.90%), Postives = 176/255 (69.02%), Query Frame = 0
Query:   18 QKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGEL-PAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQAAKS 272
            Q+++ +GGNWK NG      GI+K LN  GP     EVV++PPA  L +V+  +  +VA SAQN     K GAFTGE+  AA+ KD G  W I+GHSERR  F   GE DE++  KTK  ++ GL V+AC+GEKLE+RE+ QT EVV +Q SA A+ +  SDWSKVV+AYEPVWAIGTGKVA+PEQAQ+VHAS+R +L + + A  A   RIIYGGSV   +   L  KPD+DGFLVGGASL  DF+ II A K+
Sbjct:    4 QRKFFVGGNWKLNGDKQSVDGIIKFLN-DGPLDENTEVVVSPPAIYLDYVRGKLNNNVATSAQNCYKVAK-GAFTGEIVSAAMAKDVGATWIILGHSERRHVF---GECDELIGQKTKYVLEEGLGVIACIGEKLEERESNQTNEVVFRQTSAFAANI--SDWSKVVLAYEPVWAIGTGKVASPEQAQEVHASLRKWLADNVSAEVAQKTRIIYGGSVSAGNCKELGTKPDVDGFLVGGASLKPDFVQIINARKA 251          
BLAST of NO08G01800 vs. NCBI_GenBank
Match: XP_001897269.1 (triosephosphate isomerase [Brugia malayi] >CDQ04840.1 BMA-TPI-1 [Brugia malayi])

HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66
Identity = 138/250 (55.20%), Postives = 174/250 (69.60%), Query Frame = 0
Query:   19 KRYLIGGNWKANGTLAQAAGIVKTLNGGGPFPLEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALLKDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEKLEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATPEQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFITIIQA 269
            +++L+GGNWK NG  A    I+K LN G   P   +VV+APPA  L +VK+ V+  + VSAQN     K GAFTGE+  A++KD GL+W I+GHSERR  F   GE+DE++A K   AVD+GL  + C GEKL++REAG+T  V  +QL A+  K  K++W+K+V+AYEPVWAIGTGK A+PEQAQ+VH  IR FL EK+ A  A   RI+YGGSV   +A  L  KPDIDGFLVGGASL  DFI II A
Sbjct:    3 RKFLVGGNWKMNGNKASVDNIIKFLNDGAVVP-NVDVVVAPPAPYLSYVKEKVKNGIEVSAQNCYKVEK-GAFTGEISPAMIKDLGLHWVILGHSERRHIF---GESDELIAEKVLHAVDSGLQTIFCCGEKLDEREAGKTKAVNFRQLQAVIDK--KANWNKIVIAYEPVWAIGTGKTASPEQAQEVHGWIREFLKEKVSADVAQKTRILYGGSVTAENAAELAKKPDIDGFLVGGASLKPDFIKIIHA 245          
The following BLAST results are available for this feature:
BLAST of NO08G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854446.19.600e-13187.45triosephosphate isomerase (TIM) [Nannochloropsis g... [more]
CEM14871.14.700e-7759.51unnamed protein product [Vitrella brassicaformis C... [more]
CBJ32973.12.800e-7456.52Triosephosphate isomerase [Ectocarpus siliculosus][more]
XP_002181761.15.000e-7153.57isomerase triosephosphate isomerase [Phaeodactylum... [more]
XP_002295570.13.600e-6952.09triose-phosphate isomerase [Thalassiosira pseudona... [more]
GBG34141.15.200e-6855.34Triosephosphate isomerase [Aurantiochytrium sp. FC... [more]
XP_009040025.12.000e-6754.98hypothetical protein AURANDRAFT_72255 [Aureococcus... [more]
XP_003145182.13.400e-6754.80triosephosphate isomerase [Loa loa] >EFO18888.1 tr... [more]
XP_009048158.19.800e-6754.90hypothetical protein LOTGIDRAFT_238326 [Lottia gig... [more]
XP_001897269.11.300e-6655.20triosephosphate isomerase [Brugia malayi] >CDQ0484... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL106nonsL106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR139ngnoR139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008862NSK008862Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01800.1NO08G01800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582413gene_3508Nannochloropsis oceanica (N. oceanica CCMP1779)gene
TPIgene3879Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01800.1NO08G01800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01800 ID=NO08G01800|Name=NO08G01800|organism=Nannochloropsis oceanica|type=gene|length=1373bp
TACCAGTTGAGCAAGCACAACAGCTTCCTCCTGGGAGGGAAGAAGAACAA
AAGCTGTGTCTGGCAGGTGTGTACGCGACTGTACCTATCTACATCCCTAG
AAGCGCGTCTTTGCTTCCCATCACTCCGCTTATCGCCTGCCCTAAACCCT
CGGCTTCCCTCCGTCCCAAACGACCCCCACACGACACAGCACTCTTCAAC
CCAAGCGTAAGCTCCAACAGCAACAGCAAGTTATGTCCTCATCGCAAGGA
TGGGCGCAGTACCTGGCTCGTGGCGTGCCCCCCCAGAAGCGGTACCTGAT
CGGCGGCAACTGGAAGGCTAATGGGACCCTGGCCCAAGCCGCTGGCATTG
TGAAGACCCTGAATGGCGGCGGGCCTTTTCCATTGGAAGCCGAGGTGGTG
ATAGCGCCCCCCGCGCACCTGTTGGGATTCGTCAAGGACAACGTACGCCC
CGATGTGGCTGTTTCGGCTCAGAACTCGGCCTTGACCACTAAAGCCGGGG
CTTTTACGGGCGAGCTGCCCGCGGCGCTCTTGAAGGACTTCGGGTTGAAC
TGGGCCATTATCGGGCACTCAGAGCGTAGGGAGGGTTTTGGTGGGCCGGG
GGAGACGGACGAAGTGGTGGCGACCAAGACCAAGGTGGCCGTGGACGCGG
GTTTACACGTCATGGCATGTGTGGGGGAGAAATTGGAGCAGCGGGAGGCA
GGGCAAACGACCGAGGTAGTGTTGAAGCAGCTGAGCGCGATTGCCTCCAA
GTTGACCAAGTCGGACTGGTCCAAGGTGGTGGTGGCGTACGAGCCGGTGT
GGGCCATTGGCACGGGCAAGGTGGCAACACCGGAACAGGCCCAGGATGTG
CATGCGTCCATTCGCGCGTTCTTGACCGAGAAGATTGGGGCGAGCGCGGC
GTCGTTAGTTCGGATTATTTATGGGGGGTCCGTGAAGGGCTCGTCAGCCC
CGGGACTGATTTTGAAGCCGGACATCGACGGGTTTCTGGTGGGGGGGGCG
TCGTTGACGAGTGACTTTATCACGATTATCCAGGCAGCCAAAAGCTCATA
AATAGGGGAAGGAAGGAAGGGAGTGCTAGAGGGGAGCACGCACGTGAGAG
ATCCTCTCGGTGTGGACGAAGACAGGAAGATGAGGAAGTAAGAGAGAGAG
GGCGTATACAAGTTTGAGGGATTGGGACCCGAAGAAAAGCTATGCTCCGC
TTTGAGGAGCGATGCATTTATCCGGTTTTGTTTTGGGGGGCGATATGCTT
TTATAGATACACGTTTTTGGGTTGGAGATACAGAAATCGGTGGAAAAAAA
GGGGGGGAGAGTGCTTAAAGATTAAGAGAGGATCAATTGACGAGAAATCA
TCAAGTCTCTTTTACACCTGCGA
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protein sequence of NO08G01800.1

>NO08G01800.1-protein ID=NO08G01800.1-protein|Name=NO08G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bp
MSSSQGWAQYLARGVPPQKRYLIGGNWKANGTLAQAAGIVKTLNGGGPFP
LEAEVVIAPPAHLLGFVKDNVRPDVAVSAQNSALTTKAGAFTGELPAALL
KDFGLNWAIIGHSERREGFGGPGETDEVVATKTKVAVDAGLHVMACVGEK
LEQREAGQTTEVVLKQLSAIASKLTKSDWSKVVVAYEPVWAIGTGKVATP
EQAQDVHASIRAFLTEKIGASAASLVRIIYGGSVKGSSAPGLILKPDIDG
FLVGGASLTSDFITIIQAAKSS*
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Synonyms
Publications