Naga_100046g45, gene3464 (gene) Nannochloropsis gaditana

Overview
NameNaga_100046g45
Unique Namegene3464
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:777405..780850 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100046g45
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:777405..780850 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL133ngnoL133Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02650NO07G02650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3597rna3597-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3597rna3597Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3597

>rna3597-protein ID=rna3597-protein|Name=rna3597|organism=Nannochloropsis gaditana|type=polypeptide|length=906bp
MSGKRTRRPVQKLGDFEEVDSVSSLAGVAPDAGSVVSHATGSRAHQRQQH
QRAGRANKKRDDRSALVEVWMCKNESGNKPSTAIKEEYAQQLRIRKDGFW
DTMKAYALKSKLACLPDFEQIWHHMKDDKSDLLQDLRLQGVDFWWEQEED
EQGVVFYKPNTQNLKNFKPASGLLHHFYQVYIHDSRNYETVRHNPRATGS
RFRTDPEELDDLVAKLSPFRVLPEPKALLVLPNSTAPLHQSLRGTYALGK
KVNNHNVFFRPARQVAKGKGTDFRSVILNGATVDVPAGKEENYALVVNAL
SVLCKEERKDEGESEVFQDVPFRMRVPPEGAEEGPGREAGVLTTTIEDLG
ENMFDLTTDVGVMVYPVRGLLPIPEIMRFIDFGAVWQGCFSPFPRTAASF
QEFVAQFSAFPETCLSFFFYGGDSAGGRTRGEEAVGGRRKDVLAEDYIRF
MTWFANFDDGLGQACCNAWALYKALEGVPFYLSSQSEDLRAVRQAGMYAV
RLSDTKPQCLTVEVWQQAEVEAVEEEDGVGAATSAAVEGTVLCFRVRVTY
NHPAGGAAKKATALSTADGVVLPQVQFSLEDAVGKVSVTSRNRLAGPVLK
KIEQQTRLPAGMSLTPLLFSEDARELHGPRSGGEDATGLGRGMSGSSTSS
TGAGGRGRRNNMGPPAAPIPTDESRTGSRNRGKAGTAAAGGAELRSQTHK
RKRGGGEDRSLPPPLSKMGTAGASAFNDETFDINGAKQLAAAQIKREVSN
VLPSAEGEGSRSIDMPPAISAGLTGSSSGSNGAPLNMWGQHIPMPTVGRD
HSLAPPPMMSGNSLTGGGSGGGGASGGLRQESIGKGDSWGSVLKNIDDLS
PPGVNREHSLALGLPGFSRDMSMGSLSDFPRLSRGPSQYDESLGGAGEEG
GGKSGN
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Synonyms
Publications