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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100046g45.5161.mrna |
| Orig protein id | gnl|cribi|Naga_100046g45.5161 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:777405..780850 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3597 ID=rna3597|Name=rna3597|organism=Nannochloropsis gaditana|type=mRNA|length=1642bp
GTGTCTAAGGCATATTTTTGCCCCGCTCCAGAAGAGAATGACCTCCTGTA
TCCAGGCGCTGCTGGGCTTTTACACGTGAGAAAATTCATCCACTGGTCCG
CACTGCAAACACTTGAAGTGAATAGATACGGAAATTCATTTTTCATGGTA
TCCGCGTTTTTGGGTTGATAGCATATGATACAACATCACTTGTTCCTGCT
TTATCATGCTCCTCCGTGAAACAGCCTACTTATTTTTCGCTTCACACTTT
ATTTCCTCCGGTTAGGGACAGTTTTGATGCTTCCATTCTTGCGAACAGCA
TGTTTCAATCGCACAGTACGTCGCCATCCTCCACTCGCCTTGCTAAAATC
ACTAATGATAACCAGCCCTGCGCGACCCCGTCTTGCTGCCTTCTCGACCA
AGTCAAGCGGGCCAGACCCCGCCAATCACGGCCAGTACTGCGTGGAACTG
GTCAAGCAGCATGATTTCGACGCCTATCTATGCGGATTGCTTGTCCCGAG
ATCCTCGCGGCGGGCCTACTTTGCACTGCGGGCATTCAATGTCGAAACGG
CCCTAATCAAAGACGTGGCCAGGGGCAACGCTCTTCCCGGACAGATGCGC
ATGCAATGGTGGAGAGAAGTTATAAGCGGGATTTACCAAGGAAAGTCCCC
CGCGCATCCCGTAGCACGCGCCCTGTGCGAAGCAGTACAAGCCCACAATC
TGACGCGGCGATGGCTGGACCGGCTATTGGAGGCCCGCGAGGGGGACCTC
GGGAACATCCAGCCGACGCGCATGGAGGAGCTGGAGGACTACGCCGAGAA
CACGGCGTCCTCTCTACTCTACCTGACACTGGAGGCTTTGCACGTCCGCC
ACCCCACCGCGGACCACGCTGCCAGCCACGTGGGCCGGGCCACTGGGATC
GCCACCGTCCTCCGGGCCACTAAGTTCCACGCCTCCCACCAAAGCCTGTA
CGTCCCCCTCGAGATCCAGCGAGAGTTCAAAGTAAATGTGAACGACATCC
TGCGGGGACCTGAGTCCCCCGAAGCGGCGCAAGCGCTCTCGGATATGTTC
TTCGAGGTCGCCACGCAGGCTCACCTTCACATGGAGCACGCGCGGGAGAT
GCTCGCCTCCCCGCCCCCGTCCTCCAGCGGCCCCTTGCCCCGTAATACAA
TCACTGCACTCCTACCTGCCGTCCGTACCACCATGTATCTCAAGGCTTTA
CAGAAGAACGGGTTCAACGCGCTGGACCAGGACCTCCTACCACGCAGCCA
TCTCGAGTTTCAGCTTCGCCTCTGGTGGGCGAACTGGAGGGGCAAGATAT
GAGGCTGCGTCCACGAGTAAGGAGACGCCATCGGCGAACAGAAGTGCGAG
CGGGTCGGGAGTGCTCGAGTGGTGGGCTTGCTGGGATGGGTAGGGTGCTT
TTGTCAAGCGATGCTCAGGAGGGGAGTTCAGCGACCGGCGGGAAAGCCCA
GTCGATTGGCCGGCTGTACGATACGGTGGAGTAGACCATGTCTAAAAAAT
GGATTTCTAGCGCGCAAAGAAAACTGCGCACTGTCCAGTGCCACTCACGA
AAGAAAATTTTCCTGCGATTGCCTTGAGGCACGTTATCCCTGGACACACA
CTCGGGCTAATTGTCTGCGTACTTTGACGTCTGGCCCATTGC back to topprotein sequence of rna3597 >rna3597-protein ID=rna3597-protein|Name=rna3597|organism=Nannochloropsis gaditana|type=polypeptide|length=906bp
MSGKRTRRPVQKLGDFEEVDSVSSLAGVAPDAGSVVSHATGSRAHQRQQH
QRAGRANKKRDDRSALVEVWMCKNESGNKPSTAIKEEYAQQLRIRKDGFW
DTMKAYALKSKLACLPDFEQIWHHMKDDKSDLLQDLRLQGVDFWWEQEED
EQGVVFYKPNTQNLKNFKPASGLLHHFYQVYIHDSRNYETVRHNPRATGS
RFRTDPEELDDLVAKLSPFRVLPEPKALLVLPNSTAPLHQSLRGTYALGK
KVNNHNVFFRPARQVAKGKGTDFRSVILNGATVDVPAGKEENYALVVNAL
SVLCKEERKDEGESEVFQDVPFRMRVPPEGAEEGPGREAGVLTTTIEDLG
ENMFDLTTDVGVMVYPVRGLLPIPEIMRFIDFGAVWQGCFSPFPRTAASF
QEFVAQFSAFPETCLSFFFYGGDSAGGRTRGEEAVGGRRKDVLAEDYIRF
MTWFANFDDGLGQACCNAWALYKALEGVPFYLSSQSEDLRAVRQAGMYAV
RLSDTKPQCLTVEVWQQAEVEAVEEEDGVGAATSAAVEGTVLCFRVRVTY
NHPAGGAAKKATALSTADGVVLPQVQFSLEDAVGKVSVTSRNRLAGPVLK
KIEQQTRLPAGMSLTPLLFSEDARELHGPRSGGEDATGLGRGMSGSSTSS
TGAGGRGRRNNMGPPAAPIPTDESRTGSRNRGKAGTAAAGGAELRSQTHK
RKRGGGEDRSLPPPLSKMGTAGASAFNDETFDINGAKQLAAAQIKREVSN
VLPSAEGEGSRSIDMPPAISAGLTGSSSGSNGAPLNMWGQHIPMPTVGRD
HSLAPPPMMSGNSLTGGGSGGGGASGGLRQESIGKGDSWGSVLKNIDDLS
PPGVNREHSLALGLPGFSRDMSMGSLSDFPRLSRGPSQYDESLGGAGEEG
GGKSGN back to topmRNA from alignment at CM002461.1:777405..780850+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3597 ID=rna3597|Name=rna3597|organism=Nannochloropsis gaditana|type=mRNA|length=3446bp|location=Sequence derived from alignment at CM002461.1:777405..780850+ (Nannochloropsis gaditana)
GCATCACAGGCAGTCATGTTGCACGCTTTCTGacccggaggaagaggacg
ttATATTCGATTGGTACCTCCCCGTTCCCGCGCAGCACCCTATGCACTCC
CTCACAGCTTTTTCTATTCACCGTCTCACAGCTCAAAACGACCAATCGAG
TGGAGTTGTGTCGTCAGACTTTTTTGATCGTTATAATCGGGACCCTTGGG
TGGCGGCTTTCCGTGGTACAGTCCTAGCTCGGGAAAACCCAGGTTTTCCG
CTCATCGCTTCTTGGCAGGGCAAAAGTCATGTCGGGTAAACGCACGAGAA
GACCGGTTCAAAAACTAGGGGATTTCGAGGAAGTAGACAGCGTGTCCTCT
CTGGCCGGTGTTGCTCCTGATGCAGGCTCTGTGGTCTCCCACGCTACCGG
CAGCCGGGCCCACCAGCGACAACAGCATCAACGGGCCGGTCGCGCAAACA
AGAAGCGCGACGACAGGAGtgccttggtggaggtgtGGATGTGCAAGAAC
GAGTCCGGGAACAAACCCTCTACGGCCATCAAGGAGGAATACGCTCAACA
GCTCCGCATTCGCAAGGACGGGTTTTGGGACACGATGAAAGCCTACGCGC
TCAAATCGAAGCTGGCATGCCTGCCTGACTTTGAGCAGATATGGCACCAC
ATGAAAGACGACAAatccgacctcctccaggacctTCGACTGCAAGGCGT
TGACTTCTGgtgggagcaagaggaggacgagcaggggGTGGTTTTTTATA
AGCCCAACACGCAGAACCTGAAGAACTTCAAGCCAGCCTCGGGCTTGCTC
CACCACTTCTATCAGGTCTACATCCACGACTCTAGGAACTACGAAACTGT
CCGGCACAATCCCAGGGCAACAGGCTCCCGTTTCCGCACGGATCCCGAGG
AGCTGGACGACCTGGTTGCCAAGCTGAGCCCtttccgcgtcctccctgaG
CCCAAGGCCCTGCTCGTGCTGCCCAACTCGAccgctcccctccaccaaaG
CCTGCGGGGCACGTATGCCCTGGGCAAGAAGGTGAACAACCACAACGTGT
TCTTCAGGCCTGCCCGTCAGGTggcgaaaggaaaagggaccGACTTTCGG
AGCGTGATTTTGAACGGGGCGACAGTGGACGTGCCGGcgggcaaggaaga
aaactACGCTCTTGTCGTGAACGCGCTGTCCGTGCTGTgcaaggaggagc
gaaaggacgagggcgagtcGGAGGTTTTCCAGGACGTTCCCTTCCGCATG
CGGGTGCccccggagggggcggaggagggtccGGGGCGCGAGGCGGGGGT
GCTGACGACGACGATCGAGGACCTGGGGGAGAACATGTTCGACCTGACCA
CCGACGTGGGCGTCATGGTCTATCCGGTGCGAGGCCTCCTGCCCATCCCC
GAGATAATGCGCTTCATCGATTTCGGGGCGGTCTGGCAGGGTtgtttctc
ccccttcccgcggACGGCCGCCTCGTTTCAGGAGTTTGTGGCGCAGTTCA
GCGCCTTCCCCGAGACGTGCCTGAGCTTCTTTTTCTACGGCGGGGACAGT
GCGGGGGGACGCAccaggggcgaggaggctgtcGGTGGTAGACGCAAGGA
CGTGCTGGCGGAAGACTATATCCGTTTCATGACCTGGTTCGCGAACTTCG
ACGACGGTCTCGGCCAGGCCTGCTGCAATGCCTGGGCGCTGTacaaggcc
ttggagggcgtTCCCTTCTACCTCTCGAGCCAGAGCGAGGACCTGCGGGC
CGTCCGTCAAGCGGGGATGTATGCAGTGCGGCTGTCGGACACGAAGCCTC
AGTGCCTGACTGTGGAAGTCTGGcagcaggcggaggtggaggcagtggag
gaggaggacggcgtgggCGCAGCGAcgtcggcggcggtggaagggactGT
TCTTTGCTTCAGAGTCCGGGTGACGTACAACCACCCTGCGGGCGGGGCAG
CAAAGAAGGCAACCGCCTTGAGCACCGCGGACGGGGTGGTATTGCCTCAA
GTGCAATTTTCCTTGGAGGACGCAGTGGGAAAGGTGTCAGTGACGAGCAG
GAATCGGCTTGCTGGCCCCGTGCTGAAGAAGATCGAGCAACAGACACGCT
TGCCGGCTGGCATGTCACTGACGCCGCTCTTGTTCTCCGAGGACGCGCGG
GAGCTTCACGGGCcaagaagcggaggggaggacgcaaCGGGGCTGGGGCG
AGGAATGAGTGGGAGCTCGACGAGCTCGACAGGGGCcggtggacgaggtc
ggCGGAACAACATGGGCCCTCCGGCGGCCCCAATTCCAACAGATGAATCG
CGGACAGGGTCAAGGAATAGGGGCAAAGCGGGCACTGCGGCAGCCGGCGG
GGCAGAGTTGCGGTCCCAGACACACAAgcgaaagagaggaggtggtgaag
acaggtccttgccccctccgCTCTCGAAAATGGGTACGGCGGGGGCGTCG
GCTTTCAATGACGAGACTTTTGATATCAACGGTGCCAAGCAGTTGGCCGC
CGCGCAAATTAAGCGAGAGGTGAGCAACGTCTTACCttcggcggagggag
aggggtcgaGGAGTATCGATATGCCACCCGCCATCTCCGCGGGTTTGACG
GGaagcagcagtggcagcaACGGCGCGCCTCTGAACATGTGGGGCCAGCA
CATCCCCATGCCTACTGTGGGCCGCGACCACTCGTTGGCGCCGCCGCCCA
TGATGTCGGGCAACTCGCTCACAGGTGGGGGTtctggcggtggaggggcg
aGTGGAGGCCTGAGACAAGAATCGATAGGGAAGGGTGACTCGTGGGGGTC
GGTACTCAAAAATATTGAcgacctctctccccctggAGTCAATCGGGAGC
ATTCTCTGGCTTTGGGCCTCCCCGGCTTCTCACGGGACATGTCGATGGGT
TCCCTGAGCGATTTCCCTCGTCTCTCTCGGGGCCCGTCGCAGTACGACGA
GAGCCtcgggggagcgggggaggaggggggagggaaaagcggaaACTGAT
GGCGTTGAAAGAAATGGGTCGGGAAGTACAGATTGAAAATTGAATGCGTG
ATACGATTGGCAGATCTCACGATCGGCTATCGTGGGACCGAGCTGAGGGC
ATCGATGTCGAAAAGATTGGAGCAAGACCATTGAAGTATATCTTGAATGA
GACAGCGTTGGGTATTTCTGTGTAGATCTTCGCTCTTGCGAAAAAACTGT
ACTGTCGAATGACTATCTTTCGGTCTTGTCAGAAGAGTATCCCCGCATTG
TCTCGCGTGGATTTCAGCAggggagcaagcggagcGAGGCAACAAGCCTC
CCACCATTGTTCTTGGGGCCTGCACTGAAGACAGCCCGAAAATGTATGTA
TATATCAAGCCAAAAACGATCAAATCAACGACAAGAATGAGTAAAACAGG
GAGTAACCAACATTACATTTTGAGAAGCAACTTATTTGTATCgacc back to topCoding sequence (CDS) from alignment at CM002461.1:777405..780850+ >rna3597 ID=rna3597|Name=rna3597|organism=Nannochloropsis gaditana|type=CDS|length=2721bp|location=Sequence derived from alignment at CM002461.1:777405..780850+ (Nannochloropsis gaditana)
ATGTCGGGTAAACGCACGAGAAGACCGGTTCAAAAACTAGGGGATTTCGA
GGAAGTAGACAGCGTGTCCTCTCTGGCCGGTGTTGCTCCTGATGCAGGCT
CTGTGGTCTCCCACGCTACCGGCAGCCGGGCCCACCAGCGACAACAGCAT
CAACGGGCCGGTCGCGCAAACAAGAAGCGCGACGACAGGAGtgccttggt
ggaggtgtGGATGTGCAAGAACGAGTCCGGGAACAAACCCTCTACGGCCA
TCAAGGAGGAATACGCTCAACAGCTCCGCATTCGCAAGGACGGGTTTTGG
GACACGATGAAAGCCTACGCGCTCAAATCGAAGCTGGCATGCCTGCCTGA
CTTTGAGCAGATATGGCACCACATGAAAGACGACAAatccgacctcctcc
aggacctTCGACTGCAAGGCGTTGACTTCTGgtgggagcaagaggaggac
gagcaggggGTGGTTTTTTATAAGCCCAACACGCAGAACCTGAAGAACTT
CAAGCCAGCCTCGGGCTTGCTCCACCACTTCTATCAGGTCTACATCCACG
ACTCTAGGAACTACGAAACTGTCCGGCACAATCCCAGGGCAACAGGCTCC
CGTTTCCGCACGGATCCCGAGGAGCTGGACGACCTGGTTGCCAAGCTGAG
CCCtttccgcgtcctccctgaGCCCAAGGCCCTGCTCGTGCTGCCCAACT
CGAccgctcccctccaccaaaGCCTGCGGGGCACGTATGCCCTGGGCAAG
AAGGTGAACAACCACAACGTGTTCTTCAGGCCTGCCCGTCAGGTggcgaa
aggaaaagggaccGACTTTCGGAGCGTGATTTTGAACGGGGCGACAGTGG
ACGTGCCGGcgggcaaggaagaaaactACGCTCTTGTCGTGAACGCGCTG
TCCGTGCTGTgcaaggaggagcgaaaggacgagggcgagtcGGAGGTTTT
CCAGGACGTTCCCTTCCGCATGCGGGTGCccccggagggggcggaggagg
gtccGGGGCGCGAGGCGGGGGTGCTGACGACGACGATCGAGGACCTGGGG
GAGAACATGTTCGACCTGACCACCGACGTGGGCGTCATGGTCTATCCGGT
GCGAGGCCTCCTGCCCATCCCCGAGATAATGCGCTTCATCGATTTCGGGG
CGGTCTGGCAGGGTtgtttctcccccttcccgcggACGGCCGCCTCGTTT
CAGGAGTTTGTGGCGCAGTTCAGCGCCTTCCCCGAGACGTGCCTGAGCTT
CTTTTTCTACGGCGGGGACAGTGCGGGGGGACGCAccaggggcgaggagg
ctgtcGGTGGTAGACGCAAGGACGTGCTGGCGGAAGACTATATCCGTTTC
ATGACCTGGTTCGCGAACTTCGACGACGGTCTCGGCCAGGCCTGCTGCAA
TGCCTGGGCGCTGTacaaggccttggagggcgtTCCCTTCTACCTCTCGA
GCCAGAGCGAGGACCTGCGGGCCGTCCGTCAAGCGGGGATGTATGCAGTG
CGGCTGTCGGACACGAAGCCTCAGTGCCTGACTGTGGAAGTCTGGcagca
ggcggaggtggaggcagtggaggaggaggacggcgtgggCGCAGCGAcgt
cggcggcggtggaagggactGTTCTTTGCTTCAGAGTCCGGGTGACGTAC
AACCACCCTGCGGGCGGGGCAGCAAAGAAGGCAACCGCCTTGAGCACCGC
GGACGGGGTGGTATTGCCTCAAGTGCAATTTTCCTTGGAGGACGCAGTGG
GAAAGGTGTCAGTGACGAGCAGGAATCGGCTTGCTGGCCCCGTGCTGAAG
AAGATCGAGCAACAGACACGCTTGCCGGCTGGCATGTCACTGACGCCGCT
CTTGTTCTCCGAGGACGCGCGGGAGCTTCACGGGCcaagaagcggagggg
aggacgcaaCGGGGCTGGGGCGAGGAATGAGTGGGAGCTCGACGAGCTCG
ACAGGGGCcggtggacgaggtcggCGGAACAACATGGGCCCTCCGGCGGC
CCCAATTCCAACAGATGAATCGCGGACAGGGTCAAGGAATAGGGGCAAAG
CGGGCACTGCGGCAGCCGGCGGGGCAGAGTTGCGGTCCCAGACACACAAg
cgaaagagaggaggtggtgaagacaggtccttgccccctccgCTCTCGAA
AATGGGTACGGCGGGGGCGTCGGCTTTCAATGACGAGACTTTTGATATCA
ACGGTGCCAAGCAGTTGGCCGCCGCGCAAATTAAGCGAGAGGTGAGCAAC
GTCTTACCttcggcggagggagaggggtcgaGGAGTATCGATATGCCACC
CGCCATCTCCGCGGGTTTGACGGGaagcagcagtggcagcaACGGCGCGC
CTCTGAACATGTGGGGCCAGCACATCCCCATGCCTACTGTGGGCCGCGAC
CACTCGTTGGCGCCGCCGCCCATGATGTCGGGCAACTCGCTCACAGGTGG
GGGTtctggcggtggaggggcgaGTGGAGGCCTGAGACAAGAATCGATAG
GGAAGGGTGACTCGTGGGGGTCGGTACTCAAAAATATTGAcgacctctct
ccccctggAGTCAATCGGGAGCATTCTCTGGCTTTGGGCCTCCCCGGCTT
CTCACGGGACATGTCGATGGGTTCCCTGAGCGATTTCCCTCGTCTCTCTC
GGGGCCCGTCGCAGTACGACGAGAGCCtcgggggagcgggggaggagggg
ggagggaaaagcggaaACTGA back to top
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