NO07G02650, NO07G02650 (gene) Nannochloropsis oceanica

Overview
NameNO07G02650
Unique NameNO07G02650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3171
Alignment locationchr7:763801..766971 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:763801..766971 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO07G02650 vs. NCBI_GenBank
Match: EWM27122.1 (hypothetical protein Naga_100046g45 [Nannochloropsis gaditana])

HSP 1 Score: 1066.2 bits (2756), Expect = 5.400e-308
Identity = 616/921 (66.88%), Postives = 688/921 (74.70%), Query Frame = 0 
Query:    4 MSGKRARKPVQKLGDFEDSGVIGN------DTGSFNSTSAGSNSRASQLQQRAGRANKKRDDRSALVEVWMCKNESGNKPATVVKEEYAKQLRIRKDLFWDTMKAYALKSKLACIPDFEQIWHHMKDDKADLLQDLRLQGVDYWWEQETDEMGNIFYKPNTQNLKNFKPASGLLHHFYQVYIHDEGNYDAVRNNPKATGSRFRTDPDELDELVAKLSPFRVLPEPKALLVLPNSMAPLHLTLRGTYALSKKVNNFNVFIRPARQIAKGKGAAFRSVVLNGTTVDVPAGKAENYASVENALALLCKEDKKDEGESEVFHQVPFRMRVPXXXXXXXXXXXXXXXXLEATIEDLGESMFDLTSEVGVMVYPVRGLLPIPEIMRFIDFGAVWHGCFSPFPRTAASFQEFVAHFDLFPEECLNFFFFGGGREG------EREGVKMQDVLAEEYIRFMTWFANCDDGLGQGCCNARALYQALEGQPFHLGSQSEELRGRGRVGGYALRLSDTKPQCLTVEVLQQGD---GGEEEG--------VVGNVLCFRVRVTFSYSSGGAAAKKTSAAVTMVDGVVLPQVQFSLEDAEGKTSVTSRNNFVGPILKKIEQQAGLSAGVVLTPLPLEDWLSQ------GGREERVVGKGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEDLCLPPPMSKMGTAGASAFNDQTFDISGAKQLAAARMKRGVSNVLPASGREEAGRGEGG-GLDSPSTIPTG------NSNGAPLTVWGQHIPMPSVGRDHSLGPXXXXXXXXXXXXXXXXXXXXXXSRQDSIGKGDSWGSMLKNIEGLSPPGVAREHSLGLGLSGFSRDMSLGSLGDLPRLSRGTTQEEDGMMIDGAREDGEGK 889
            MSGKR R+PVQKLGDFE+   + +      D GS  S + GS +   Q  QRAGRANKKRDDRSALVEVWMCKNESGNKP+T +KEEYA+QLRIRKD FWDTMKAYALKSKLAC+PDFEQIWHHMKDDK+DLLQDLRLQGVD+WWEQE DE G +FYKPNTQNLKNFKPASGLLHHFYQVYIHD  NY+ VR+NP+ATGSRFRTDP+ELD+LVAKLSPFRVLPEPKALLVLPNS APLH +LRGTYAL KKVNN NVF RPARQ+AKGKG  FRSV+LNG TVDVPAGK ENYA V NAL++LCKE++KDEGESEVF  VPFRMRVP                L  TIEDLGE+MFDLT++VGVMVYPVRGLLPIPEIMRFIDFGAVW GCFSPFPRTAASFQEFVA F  FPE CL+FFF+GG   G      E  G + +DVLAE+YIRFMTWFAN DDGLGQ CCNA ALY+ALEG PF+L SQSE+LR   + G YA+RLSDTKPQCLTVEV QQ +     EE+G        V G VLCFRVRVT+++ +GGAA K T  A++  DGVVLPQVQFSLEDA GK SVTSRN   GP+LKKIEQQ  L AG+ LTPL   +   +      GG +   +G+G  XXXXXXXXXXXXXXXXXX                                                  ED  LPPP+SKMGTAGASAFND+TFDI+GAKQLAAA++KR VSNVLP++       GEG   +D P  I  G       SNGAPL +WGQHIPMP+VGRDHSL  XXXXXXXXXXXXXXXXXXXXXX RQ+SIGKGDSWGS+LKNI+ LSPPGV REHSL LGL GFSRDMS+GSL D PRLSRG +Q ++   + GA E+G GK
Sbjct:    1 MSGKRTRRPVQKLGDFEEVDSVSSLAGVAPDAGSVVSHATGSRAHQRQQHQRAGRANKKRDDRSALVEVWMCKNESGNKPSTAIKEEYAQQLRIRKDGFWDTMKAYALKSKLACLPDFEQIWHHMKDDKSDLLQDLRLQGVDFWWEQEEDEQGVVFYKPNTQNLKNFKPASGLLHHFYQVYIHDSRNYETVRHNPRATGSRFRTDPEELDDLVAKLSPFRVLPEPKALLVLPNSTAPLHQSLRGTYALGKKVNNHNVFFRPARQVAKGKGTDFRSVILNGATVDVPAGKEENYALVVNALSVLCKEERKDEGESEVFQDVPFRMRVP--PEGAEEGPGREAGVLTTTIEDLGENMFDLTTDVGVMVYPVRGLLPIPEIMRFIDFGAVWQGCFSPFPRTAASFQEFVAQFSAFPETCLSFFFYGGDSAGGRTRGEEAVGGRRKDVLAEDYIRFMTWFANFDDGLGQACCNAWALYKALEGVPFYLSSQSEDLRAVRQAGMYAVRLSDTKPQCLTVEVWQQAEVEAVEEEDGVGAATSAAVEGTVLCFRVRVTYNHPAGGAAKKAT--ALSTADGVVLPQVQFSLEDAVGKVSVTSRNRLAGPVLKKIEQQTRLPAGMSLTPLLFSEDARELHGPRSGGEDATGLGRGMXXXXXXXXXXXXXXXXXXXGPPAAPIPTDESRTGSRNRGKAGTAAAGGAELRSQTHKRKRGGG------EDRSLPPPLSKMGTAGASAFNDETFDINGAKQLAAAQIKREVSNVLPSA------EGEGSRSIDMPPAISAGLTGSSSGSNGAPLNMWGQHIPMPTVGRDHSLAXXXXXXXXXXXXXXXXXXXXXXXLRQESIGKGDSWGSVLKNIDDLSPPGVNREHSLALGLPGFSRDMSMGSLSDFPRLSRGPSQYDES--LGGAGEEGGGK 903
The following BLAST results are available for this feature:
BLAST of NO07G02650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27122.15.400e-30866.88hypothetical protein Naga_100046g45 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL094nonsL094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR133ngnoR133Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000571NSK000571Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02650.1NO07G02650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100046g45gene3464Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02650.1NO07G02650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02650 ID=NO07G02650|Name=NO07G02650|organism=Nannochloropsis oceanica|type=gene|length=3171bp
ATGCCCACCATGTCGGGCAAGCGGGCACGCAAGCCGGTGCAAAAGCTAGG
GGACTTTGAGGACTCCGGCGTTATCGGTAACGACACAGGCTCCTTCAATT
CTACAAGCGCAGGGAGCAACAGCCGGGCTAGCCAGCTACAACAACGAGCC
GGTCGAGCGAACAAGAAACGTGACGATCGCAGCGCCCTCGTGGAAGTCTG
GATGTGTAAGAACGAGTCAGGCAACAAACCCGCCACTGTCGTCAAAGAAG
AGTACGCCAAACAACTCCGCATCCGCAAGGACTTGTTCTGGGACACCATG
AAGGCATATGCGCTCAAGAGCAAGCTGGCCTGCATCCCTGACTTCGAACA
AATCTGGCACCACATGAAAGATGACAAAGCCGACCTTCTGCAGGATCTCC
GCCTTCAAGGCGTCGACTACTGGTGGGAACAAGAAACGGACGAGATGGGA
AACATCTTCTACAAACCCAACACCCAAAACCTAAAGAATTTCAAACCCGC
CTCGGGCCTTCTCCATCACTTCTACCAGGTCTACATTCACGATGAAGGGA
ACTACGACGCTGTCCGTAACAACCCCAAGGCGACTGGTTCGCGCTTCCGC
ACCGACCCAGATGAACTCGATGAGCTCGTCGCCAAGCTAAGCCCCTTCCG
CGTCTTACCTGAACCGAAGGCCCTCCTCGTCCTCCCCAATAGCATGGCGC
CCCTCCACCTCACCCTCCGGGGCACCTACGCCCTCAGCAAGAAAGTAAAT
AACTTCAACGTCTTCATCAGGCCCGCCCGGCAAATCGCCAAGGGAAAGGG
AGCAGCCTTTCGGAGCGTGGTCCTTAACGGCACAACTGTGGATGTCCCAG
CGGGGAAAGCAGAAAATTACGCTTCGGTTGAGAATGCCCTGGCTTTGCTA
TGCAAGGAGGATAAGAAGGATGAGGGGGAGAGTGAGGTTTTTCACCAAGT
CCCGTTTCGAATGCGCGTACCCCCGTCGTCAGGAGGAGGAGGAGGAGGAG
AAGAGGCAGCAGGAGGGATGCTGGAGGCAACGATTGAAGACTTGGGGGAG
AGCATGTTTGACCTGACATCGGAGGTGGGGGTGATGGTCTACCCCGTCCG
GGGGCTCTTGCCCATACCGGAGATAATGCGTTTCATTGATTTTGGGGCGG
TGTGGCATGGGTGCTTCTCGCCCTTTCCACGGACGGCGGCTAGCTTCCAG
GAGTTTGTGGCGCATTTTGACCTTTTTCCAGAGGAATGTTTGAACTTTTT
CTTTTTTGGGGGAGGGAGGGAGGGAGAAAGGGAAGGGGTTAAGATGCAGG
ATGTGTTGGCGGAGGAGTATATTCGGTTTATGACTTGGTTTGCAAATTGT
GATGATGGCTTGGGCCAGGGGTGTTGTAATGCGCGGGCGCTGTACCAGGC
GTTGGAGGGGCAGCCGTTTCATTTGGGTTCACAAAGTGAGGAGTTGAGGG
GGAGAGGGAGAGTGGGGGGGTACGCATTGAGGTTGTCGGACACGAAGCCG
CAGTGCTTGACGGTGGAGGTCTTGCAGCAGGGAGATGGAGGGGAGGAGGA
GGGGGTGGTAGGAAATGTCTTGTGTTTTCGGGTACGGGTTACGTTCAGTT
ATTCTAGTGGGGGAGCAGCAGCGAAGAAGACTTCGGCTGCAGTGACGATG
GTTGATGGAGTGGTCTTGCCGCAGGTGCAGTTTTCGCTTGAGGACGCGGA
GGGAAAGACGAGCGTGACGAGCCGGAACAATTTTGTCGGCCCTATTTTGA
AGAAGATTGAGCAGCAAGCGGGTCTGTCGGCAGGGGTGGTGTTGACGCCT
TTGCCCCTGGAGGACTGGCTCTCGCAAGGAGGGAGGGAGGAAAGGGTTGT
TGGGAAGGGAACGAGTACGGGAACGACGTCCTCAACAAGCAGTAGCGGGG
GTCGACGTCGAAGCATGGGGCCGCCTGCTGCCCGCGGAAGTACTGCTGCT
GCTGCTGGTGCTGCTGCGGGGCCTACCGCCCGTGGTGTTGGTGGACGAGG
AAAAGGTGTGGCAGGAGCAACAACAGCAGCAGCGGTGGCCGCGACGCTTA
AGCGGAAACGAGCCGCAGTGGAGGACCTCTGTTTGCCCCCGCCCATGAGT
AAAATGGGAACGGCGGGTGCGTCCGCTTTTAACGATCAAACTTTTGATAT
CAGCGGGGCGAAGCAGCTGGCGGCCGCACGGATGAAAAGGGGGGTAAGCA
ATGTGTTGCCTGCCAGTGGCCGGGAGGAAGCAGGGCGAGGAGAGGGAGGG
GGGTTGGACTCACCATCGACGATTCCGACGGGGAATAGTAATGGTGCGCC
GCTGACCGTGTGGGGGCAGCATATCCCCATGCCTTCTGTAGGGCGGGATC
ATTCCTTGGGCCCTCCTCCCATGCTCTCTGCGAATTCCCTGACGGGCGGA
GGGGTGGCAGCGGGAGGCGGGGGAGGGGTGTCAAGACAGGACTCGATTGG
GAAGGGGGATTCGTGGGGGTCAATGTTGAAGAATATTGAGGGATTGTCGC
CGCCTGGGGTGGCGCGGGAGCATTCCTTAGGATTGGGGTTGTCGGGATTT
TCGCGCGATATGTCCTTGGGGTCGCTAGGGGATCTGCCACGGCTCTCGAG
GGGGACGACACAGGAAGAGGATGGGATGATGATTGACGGGGCAAGGGAGG
ATGGGGAAGGGAAGGGGGAGCACCAGGGTTGAACGAGTATTAAAGGTCAA
TACCTGTGATAGACCATTGGGTGGGAGTAGGGGAAATTCTCGTCAGAGAA
TGCTTGTCCTGTAGCAAAATCAAGGTGTGCGCACGGATGTGCAGACGATT
GAAGAGATCGAGGCCACGACAAATGCATTTGTTCAGCCTTGAGTAAGCAG
TATGGTGGATTGGAACATAGTGGGATTACATGTAGAGGTGTCCTCCATCT
GAATGGTGGAATGCATGGCCGAAATTCTATATACACCATTTTCCTTCATC
ACCGCCCACCAGAGCAGTCAAAAATAATGAAGCATTAGAGGCGATTAAGG
TTCCGAGAGGTGATGTACGGATGCCTCCTGGATCTCTTGTGGAAAGAGAT
AGAAATTTGATGCGAACTACTGAAAGAGCATCAAGGCTCAGCAACAGCAA
TGTGGATAGCGATCATGGTAAAGGCAAGCGAAAACGCATGGAGCAAAAGA
ACAAGTAAAACACGCGCAAAT
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protein sequence of NO07G02650.1

>NO07G02650.1-protein ID=NO07G02650.1-protein|Name=NO07G02650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=894bp
MPTMSGKRARKPVQKLGDFEDSGVIGNDTGSFNSTSAGSNSRASQLQQRA
GRANKKRDDRSALVEVWMCKNESGNKPATVVKEEYAKQLRIRKDLFWDTM
KAYALKSKLACIPDFEQIWHHMKDDKADLLQDLRLQGVDYWWEQETDEMG
NIFYKPNTQNLKNFKPASGLLHHFYQVYIHDEGNYDAVRNNPKATGSRFR
TDPDELDELVAKLSPFRVLPEPKALLVLPNSMAPLHLTLRGTYALSKKVN
NFNVFIRPARQIAKGKGAAFRSVVLNGTTVDVPAGKAENYASVENALALL
CKEDKKDEGESEVFHQVPFRMRVPPSSGGGGGGEEAAGGMLEATIEDLGE
SMFDLTSEVGVMVYPVRGLLPIPEIMRFIDFGAVWHGCFSPFPRTAASFQ
EFVAHFDLFPEECLNFFFFGGGREGEREGVKMQDVLAEEYIRFMTWFANC
DDGLGQGCCNARALYQALEGQPFHLGSQSEELRGRGRVGGYALRLSDTKP
QCLTVEVLQQGDGGEEEGVVGNVLCFRVRVTFSYSSGGAAAKKTSAAVTM
VDGVVLPQVQFSLEDAEGKTSVTSRNNFVGPILKKIEQQAGLSAGVVLTP
LPLEDWLSQGGREERVVGKGTSTGTTSSTSSSGGRRRSMGPPAARGSTAA
AAGAAAGPTARGVGGRGKGVAGATTAAAVAATLKRKRAAVEDLCLPPPMS
KMGTAGASAFNDQTFDISGAKQLAAARMKRGVSNVLPASGREEAGRGEGG
GLDSPSTIPTGNSNGAPLTVWGQHIPMPSVGRDHSLGPPPMLSANSLTGG
GVAAGGGGGVSRQDSIGKGDSWGSMLKNIEGLSPPGVAREHSLGLGLSGF
SRDMSLGSLGDLPRLSRGTTQEEDGMMIDGAREDGEGKGEHQG*
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Synonyms
Publications