Naga_100010g112, gene3420 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g112
Unique Namegene3420
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:675508..677784 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g112
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:675508..677784 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL134ngnoL134Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02420NO07G02420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3550rna3550-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3550rna3550Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3550

>rna3550-protein ID=rna3550-protein|Name=rna3550|organism=Nannochloropsis gaditana|type=polypeptide|length=457bp
MVAFRARSKWRRGWRRLQSDAGSADGLSSSEAFQVYRDLIITRLCSPEWP
LPSPPRRFSFLREGFDETQPVFVLAPMVLQSERAFRLLVQRYGVTLTFSP
MLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQ
RLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQEL
GVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDL
DVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRL
FGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLR
LAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEF
LRLSAVECGVALPEGERLVPVLSLGEIKSLHRREINGQEDEEDDSWGMLF
LEGNEME
back to top
Synonyms
Publications