NO07G02420, NO07G02420 (gene) Nannochloropsis oceanica

Overview
NameNO07G02420
Unique NameNO07G02420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2582
Alignment locationchr7:702305..704886 +

Link to JBrowse

Properties
Property NameValue
DescriptionDihydrouridine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:702305..704886 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_domain
IPR001269tRNA_hU_synthase
Homology
BLAST of NO07G02420 vs. NCBI_GenBank
Match: EWM27226.1 (dihydrouridine synthase, partial [Nannochloropsis gaditana])

HSP 1 Score: 525.4 bits (1352), Expect = 2.500e-145
Identity = 284/465 (61.08%), Postives = 340/465 (73.12%), Query Frame = 0
Query:    1 MVAFRARSKWKRGWRRLRHDGTTSAGSTADEDAFTFYWLFIQARLNSPEWPLPSPSRPISILGGIFGEVRQPLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAA----------PADTIAPA----XAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELLRLGAVLCASRSEEGMKVGKEGEGGVLTLQEIKSLHRRGDKNEEEQQEGDGKGFVWGGLFEE 452
            MVAFRARSKW+RGWRRL+ D  ++ G ++ E AF  Y   I  RL SPEWPLPSP R  S L   F E  QP+FVLAPMVLQSERAFRLLVQRYGV L FSPMLLARNVL      +++ PY  ELLRPC  D PV+AQLAG+DP  +LAAA+RLW+GG IAG+D+N GCPQ+CA+ G YGAYL +++ +TA  MVR++ +ELGVPVSCKLR +  V+ T   A+RL  AGA++LTVHGR+P +RDHQ++SD DVIRAVREAV +PV+ANGNCRTR+DAE A+ YTGCDG MSA+GLLRNPRLF A           AD  APA     +AL++SGTL +P  AF+CAWEYL LAEA PPPE RCVRDHLQ +LQG+LQ + VALWNLLGS +MVL +QF E LRL AV C     EG ++       VL+L EIKSLHRR + N +E +E D     WG LF E
Sbjct:    1 MVAFRARSKWRRGWRRLQSDAGSADGLSSSE-AFQVYRDLIITRLCSPEWPLPSPPRRFSFLREGFDET-QPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMD-PYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEFLRLSAVECGVALPEGERLVP-----VLSLGEIKSLHRR-EINGQEDEEDDS----WGMLFLE 452          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: XP_009830888.1 (hypothetical protein H257_07149 [Aphanomyces astaci] >ETV79952.1 hypothetical protein H257_07149 [Aphanomyces astaci])

HSP 1 Score: 216.9 bits (551), Expect = 1.900e-52
Identity = 132/338 (39.05%), Postives = 194/338 (57.40%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVEC--PYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELLRLGAVLCASRSEEGMKV 408
            P FV APMV QSE AFRLL +R G +L F+PM +A +V+  A  G ++     + +      +D+P++ QLAG DP + LA A  L +     GIDLN GCPQ+CA  G +GAYL+  D D    +VR +V    VP++CK+R    + A++  A+RLE+AG ++LTVHGR   QR H+   ++D IR +R++V+IPVLANG  ++RQ A   ++YTGC G+MSA  LL+NP              AAL++S     P   +A A +YL LA  +PP      RDH+  +++   Q + + LW       ++ + Q  + L    V  ASR ++ + V
Sbjct:   18 PQFVCAPMVRQSELAFRLLTRRLGCQLAFTPMFVASDVV-AAAAGSMDATIDVSHQFFATADEDRPLIVQLAGNDP-ITLATAVALLQ-HRCDGIDLNLGCPQRCARTGHFGAYLLD-DPDLVEQVVRAMVHVAKVPITCKIRIQQDIRASIDLARRLEDAGCSMLTVHGRLRTQRHHEGTCNWDAIRQIRQSVAIPVLANGGIQSRQHAVECIKYTGCAGVMSATALLQNP--------------AALSAS-----PTSVYATALQYLALAREYPPLHADTTRDHILTMMRSKCQRQFIDLWG------VIQHVQLPDQLEACVVHVASRHDDTVVV 326          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: CEO96840.1 (hypothetical protein PBRA_005444 [Plasmodiophora brassicae])

HSP 1 Score: 213.4 bits (542), Expect = 2.100e-51
Identity = 137/376 (36.44%), Postives = 205/376 (54.52%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVL-NHAETGKVECPYARELLRP---CPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELLRLGAVLC--ASRSEEGMKVGKEGEGG--VLTLQEIKSLHRRGDKNEEEQQEGD 440
            P F+ APMV QSE AFRLLV+  G  L ++PM+LA++V+  +A+TG     Y R   R       D+P++AQ+AG DP+++  AAR L    ++  +D+NFGCPQ+CA +G YGA+L+    DT V +VR +   + VPV+CK+R +  V   +  A+RLE+AG ++L VHGR   QR H    +++ I A++ A+ IPV+ANG  R+R  A   +  TGCD +MSA  LLR P +FA                    +P   F C W Y  LA   PP      RDH+  + +   +F      +L+G   ++ NK  R   ++GAVL   A R +E +  G  G  G  + +  +I +  R G+++     + D
Sbjct:   20 PRFICAPMVRQSELAFRLLVRSLGCDLAYTPMILAKDVVERYAQTG-----YDRVATRAAFFATGDRPLIAQIAGNDPKVMAEAARLL--APDVDAVDVNFGCPQQCARLGHYGAFLLD-HPDTMVDIVRAIRSAISVPVTCKIRLLNPVSLAIDLAKRLEDAGCSMLAVHGRLRDQRHHCGPVNYEGIAAIKAALRIPVVANGGIRSRDHALQVMEATGCDAVMSATTLLRQPAMFAG-------------------DPVSVFDCLWRYARLARTHPPIADVSARDHVLTVFRE--RFHAEGHLDLVG---ILSNKAIRTANQIGAVLAIIAHRFQEPIDEGFPGSAGEPLPSFNDICNNRRLGNESSRSSSDDD 363          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: XP_012207405.1 (hypothetical protein SPRG_12348 [Saprolegnia parasitica CBS 223.65] >KDO21847.1 hypothetical protein SPRG_12348 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 213.0 bits (541), Expect = 2.700e-51
Identity = 120/320 (37.50%), Postives = 179/320 (55.94%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPP-EPRCVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELL 391
            P FV APMV  SE AFRLL +  G  L FSPML A  ++  A         +   L   P D+P++ QL G DP  + AA + +       GIDLN GCPQ+CAEIG +GAYL+++  DT V++VR +V    +P+SCK+R +  ++ T++ AQ ++ AG A+LTVHGR   QR H+ + ++D I A+R+A++IP+LANG  R+R +AE  L  TGC  +M+A GLL NP +FA                     P+  +  A  YL +    P    P   RDH+  + +   +  ++ ++++LG   ++L  Q   +L
Sbjct:   16 PRFVCAPMVRASELAFRLLTRELGCDLTFSPMLHATELVAAAAAAPAGTDISLAFLDTSPADRPLIVQLCGNDPTALAAAVQLVQH--RCDGIDLNLGCPQRCAEIGGFGAYLLEQ-PDTIVSIVRAMVAASNIPISCKIRLLPSLDETIALAQGIQAAGCAMLTVHGRLRAQRHHEGVCNWDAIGAIRKAIAIPMLANGGIRSRAEAEACLAATGCQAVMAATGLLENPSIFA-------------------VEPQGIYDVALRYLAIVAEQPRTLYPTAARDHVLTMFRHKYRETDMDVFSVLGHHDVLLPAQLEAVL 313          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: XP_008608319.1 (hypothetical protein SDRG_04422 [Saprolegnia diclina VS20] >EQC37992.1 hypothetical protein SDRG_04422 [Saprolegnia diclina VS20])

HSP 1 Score: 209.9 bits (533), Expect = 2.300e-50
Identity = 121/319 (37.93%), Postives = 180/319 (56.43%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELL 391
            P FV APMV  SE AFRLL +  G  L FSPML A  ++  A         +   L   P D+P++ QL G DP  + AA R +       GIDLN GCPQ+CAEIG +GAYL++ + DT V++VR +V     P+SCK+R +  ++ T++ A+ +E AGAA+LTVHGR   QR H+ I ++D I AVR+A++IP++ANG  R+R +A+  L  TGC  +M+A GLL NP +FA    +I    A    +     PR  +A A                  RDH+  + +   + +++ ++++LG   ++L  Q   ++
Sbjct:   15 PRFVCAPMVRASELAFRLLTRELGCDLTFSPMLHATELVAAAAAAPSGTDISMAFLDTSPTDRPLIVQLCGNDPTALAAAVRLVQH--RCDGIDLNLGCPQRCAEIGGFGAYLLE-EPDTIVSIVRAMVAASSTPISCKIRLLPSLDDTIALAKGIEAAGAAMLTVHGRLRAQRHHEGICNWDAIAAVRKAIAIPMIANGGIRSRAEADACLAATGCQAVMAATGLLENPSIFAVETHSIYDV-ALRYLAIVAEQPRTLYATA-----------------ARDHVLTMFRHKYRDQDMDVFSVLGHHNVLLPSQLEAVI 312          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: OQR95368.1 (hypothetical protein THRCLA_07934 [Thraustotheca clavata])

HSP 1 Score: 207.2 bits (526), Expect = 1.500e-49
Identity = 128/380 (33.68%), Postives = 200/380 (52.63%), Query Frame = 0
Query:   69 VRQPLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPP-EPRCVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELLRLGAVLCASRSEEGMKVGKEGEGGVLTLQEIK--SLHRRGDKNEEEQQEGDGKGFVW 446
            V +P +V APMV QSE AFRLL + +G  L +SPML A  ++N A+  K     + +      +D+P++ Q+ G DP L+  A + +       G+DLN GCPQ+CA  G +GA+L++K  D    +V+ +V    VP++CK+R +   E T++ AQ++EEAG ++LTVHGR   QR H+   ++DVIR VREA+SIP++ANG  RT  +AE  L YTGC  +MS  GLL NP +F++   +I                   +  A  YLE+    P        RDH+  + + +    +  L++++G   ++L  Q      L A +      +   +  +    + TL++I+   L     K+ +   E    GF W
Sbjct:   13 VNEPRYVCAPMVRQSELAFRLLTREFGCDLTYSPMLPAIELVNAAKCAKPNTDISLDFFDIDSKDRPLIVQICGNDPDLLAQAVQLVQH--RCDGVDLNLGCPQRCACNGGFGAFLLEK-PDLIFKLVQAMVAVATVPITCKIRILPNEEDTIALAQKIEEAGCSMLTVHGRLREQRHHEGKCNWDVIRKVREAISIPMIANGGIRTLDEAEACLAYTGCQAVMSGTGLLDNPAMFSSMEISI-------------------YDTALRYLEIVRQMPRTLYATAARDHIISMFRSMCTEDDKDLYSVMGHHDVLLPDQ------LEACVAHLAKRQSKIINTQFGDDLPTLRQIRYNKLKSNNPKDFDSNDEEYSFGFSW 364          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: XP_008876541.1 (hypothetical protein H310_11593 [Aphanomyces invadans] >ETV94950.1 hypothetical protein H310_11593 [Aphanomyces invadans])

HSP 1 Score: 204.1 bits (518), Expect = 1.300e-48
Identity = 120/306 (39.22%), Postives = 171/306 (55.88%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVL--NHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHLQVILQGVLQFKEVALWNLL 376
            P  V APMV QSE AFRLL +R G +L F+PML+A +++  + A  G      + +      +D+P++ QLAG DP L+  A   L       GIDLN GCPQ+CA  G +GAYL+    D    +VR +V+   VP+SCK+R    + A+V+ A+RLE AG ++LTVHGR   QR H+   ++D IR +R++VSIPVLANG   +R  A   L+YTGC G+M A  LL+NP   +A + +I                   +  A +YL L   FPP      RDH+  +++   Q +   LW ++
Sbjct:   17 PQLVCAPMVRQSELAFRLLTRRLGCQLAFTPMLVASDIVAASDAAPGHSTGDISHQFFATATEDRPLIVQLAGNDPVLLAKAVTLLQH--RCEGIDLNLGCPQRCARTGHFGAYLLD-TPDRIEEIVRAMVRVACVPISCKIRIQEDIGASVALAKRLEAAGCSMLTVHGRLRSQRHHEGSCNWDAIRHIRQSVSIPVLANGGIESRDHAMECLQYTGCAGVMVASSLLQNPAAMSASSASI-------------------YETALQYLALVREFPPLHVDTPRDHVLAMMRTKCQNQFPDLWGVI 300          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: XP_002948341.1 (hypothetical protein VOLCADRAFT_80128 [Volvox carteri f. nagariensis] >EFJ50748.1 hypothetical protein VOLCADRAFT_80128 [Volvox carteri f. nagariensis])

HSP 1 Score: 201.4 bits (511), Expect = 8.200e-48
Identity = 117/293 (39.93%), Postives = 171/293 (58.36%), Query Frame = 0
Query:   66 FGEVRQPLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAI-SDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPA-DTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHL 357
            F  +  P F +APMV QSE  FRLL +R+G    ++PML       HA     +  Y  E+L  C +D+P++ Q    +PQ +LAAAR + + G    ID+NFGCPQ+ A+ G YGA+L+  D     ++VR+L + L +PV+ K+R    +  TV++A+ +E AGA+L+ VHGR   Q+D+ +  +D+D IRAV+ A+S+PVLANGN R   D    L YTG DG++SA  LL +P LF  PA  ++A    +         P    + A +Y++L  A P P  R VR H+
Sbjct:   41 FRSIGSPKFHVAPMVDQSELPFRLLCRRHGATCAYTPML-------HARIFSQDRKYREEMLTTCSEDRPLLVQFCAHEPQHLLAAARLVQDSGVADAIDINFGCPQRIAKRGGYGAFLMD-DLPRVESLVRVLAQNLRIPVTAKIRIFPDLAKTVAYARMVEAAGASLVAVHGRLREQKDNSSTRADWDAIRAVKAALSVPVLANGNIRHLGDVGACLSYTGADGVLSAESLLADPALFDVPARASVAVGDVSGRGRWYSAPPLERLSLAAQYMDLVRAHPVP-LRMVRGHV 324          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: KOO26115.1 (dus-domain-containing protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 201.1 bits (510), Expect = 1.100e-47
Identity = 129/313 (41.21%), Postives = 166/313 (53.04%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYA------RELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAISDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAAPADTIAPAXA----------------ALTSSGTLTNPRVAFACAWEYLELAEAFPPPE-PRCVRDHLQVILQ 362
            P +  APMVLQSE AFR++V+R+G  LC+SPM+     L     G    P              C  D+P++AQ  G D   +LAAA  +    ++ G+D+N GCPQ CA  G YGA+L+    D    +V  LV  L VPV+ K+R    VE TV+FA+ LE AG A L VHGR   QR HQ   D+D I AV+ A+SIPV+ANGN R++ DA+  L  TG D +MSA  LL NPRLF+      AP                   AL   G     R   A   EYLE  +A+P    PR + DHL+ IL+
Sbjct:   20 PRYCCAPMVLQSELAFRMMVRRHGSTLCYSPMIPVEAFLRLPADGPPVAPSTGGPATQAAYFTTCGADRPLLAQFGGNDAGQMLAAALLIQR--HVDGVDINLGCPQACACKGGYGAFLMD-HPDRVRGIVETLVAGLDVPVTAKIRVFPEVERTVAFAKMLEAAGVAALAVHGRRREQRMHQGTVDYDSIAAVKAALSIPVIANGNVRSKADADAVLASTGVDCVMSATALLANPRLFSCMHAPEAPGGGCMHAEPQQPSLLIRQPALQPKGPTLEERAQMAL--EYLECCKAYPSGALPRMISDHLREILR 327          
BLAST of NO07G02420 vs. NCBI_GenBank
Match: XP_024392284.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X2 [Physcomitrella patens] >PNR42768.1 hypothetical protein PHYPA_017598 [Physcomitrella patens])

HSP 1 Score: 200.7 bits (509), Expect = 1.400e-47
Identity = 116/294 (39.46%), Postives = 169/294 (57.48%), Query Frame = 0
Query:   72 PLFVLAPMVLQSERAFRLLVQRYGVKLCFSPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILAAARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILVKELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAI-SDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRNPRLFAA----PADTIAPAXAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPRCVRDHLQVIL 361
            P  ++APM+ QSE  FR+L ++YG    ++PM        H+    ++  Y R     CP+D+P+  Q    DP+L++ AA  + E  +   +D+N GCPQ+ A+ G YGA+L+  D      MV  LV  L  PVSCK+R    +E T+++A+ LE AG +LL VHGRT  Q+D +   +D++ I+AV+EAV IPVLANGN R  +D    +R TG DG++SA  LL NP LF+     P D +      L+  G+L  P +      EYLEL E +P P+ R +R H+  +L
Sbjct:  148 PKLIVAPMMDQSELPFRMLCRKYGATAAYTPMF-------HSRPFALQPGYRRVEFTTCPEDRPLFVQFGANDPELLVKAAMFVQEDCDY--VDINLGCPQRVAKRGFYGAFLMD-DLPLIQLMVTQLVSSLTTPVSCKIRIFPDLEDTLAYARMLENAGCSLLAVHGRTRDQKDGRTTRADWEAIKAVKEAVRIPVLANGNIRWLEDVHECIRMTGVDGVLSAESLLENPALFSGHRMRPVDAVTGGLVELSKEGSLNEPSLVL----EYLELCEKYPIPQ-RMIRSHVYKML 426          
The following BLAST results are available for this feature:
BLAST of NO07G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27226.12.500e-14561.08dihydrouridine synthase, partial [Nannochloropsis ... [more]
XP_009830888.11.900e-5239.05hypothetical protein H257_07149 [Aphanomyces astac... [more]
CEO96840.12.100e-5136.44hypothetical protein PBRA_005444 [Plasmodiophora b... [more]
XP_012207405.12.700e-5137.50hypothetical protein SPRG_12348 [Saprolegnia paras... [more]
XP_008608319.12.300e-5037.93hypothetical protein SDRG_04422 [Saprolegnia dicli... [more]
OQR95368.11.500e-4933.68hypothetical protein THRCLA_07934 [Thraustotheca c... [more]
XP_008876541.11.300e-4839.22hypothetical protein H310_11593 [Aphanomyces invad... [more]
XP_002948341.18.200e-4839.93hypothetical protein VOLCADRAFT_80128 [Volvox cart... [more]
KOO26115.11.100e-4741.21dus-domain-containing protein [Chrysochromulina sp... [more]
XP_024392284.11.400e-4739.46tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-li... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000618NSK000618Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02420.1NO07G02420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552392gene_2566Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g112gene3420Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02420.1NO07G02420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02420 ID=NO07G02420|Name=NO07G02420|organism=Nannochloropsis oceanica|type=gene|length=2582bp
CGTGGCGGTGCGAACAAGGTGACGGACTACATAGTTAGAAAGTGGATGAG
CATGGTGGTGATCTGGCTGGGCTATGGTGGTGGGCCTAAGCGTGAAGGAA
AAAAAAAAAGGTGGACTTGCCCTCGGGTTCCCTGGGCCCGCGCGGGGCCC
TGGGGTTGCGTGACAGCCCGCTAGCACGATGGCAGCAGTTGGGGCCTCAG
TTCCCCTACCACGGTGTGTTGTACCGCCGACGCCACGGCCCACGGTAACC
ACCTCTCTCCAAATATGGGACACAGACAACCAATTAACACAGAGAATTTG
CGTCAGCAAGTCGAAATGGACCGTGAGCTCTTTCTGAGACACATCATCGA
TCTCATCGACCTCCCAACCCTCATCTCACACTCCACTCCACTTCATTATG
CTATCCAAGCAATGTCACTCACTTCAGGTGTCACGACTTTTGTCGATCAA
GGGGATTGTATGTTAAGGCTTTAAATACGCCCCCCATTTCTCCCCACCTC
ACCTTTTCCAATATACAGGACACACTAGGTAGGGTTAAAGTCATAAATGG
TAGCGTTTCGAGCTCGGTCAAAGTGGAAGCGGGGTTGGCGGCGCCTGAGG
CATGATGGCACAACATCAGCGGGAAGCACTGCAGATGAGGACGCGTTTAC
TTTTTATTGGCTTTTCATTCAGGCGCGTCTCAACTCGCCCGAATGGCCTT
TACCCTCTCCCTCACGCCCCATCTCCATCCTTGGAGGCATTTTCGGAGAA
GTGAGGCAGCCGCTCTTCGTACTGGCACCGATGGTCCTCCAATCAGAGAG
GGCCTTCCGGCTGCTCGTGCAACGATATGGTGTCAAGCTGTGCTTTTCGC
CAATGCTCCTCGCCCGCAATGTCCTTAATCACGCAGAAACAGGTAAGGTC
GAATGCCCTTATGCCCGAGAGCTTCTTCGACCCTGCCCTCAAGACAAGCC
AGTTATGGCTCAGTTAGCCGGTGCGGACCCACAACTGATTCTAGCAGCTG
CCCGTAGACTATGGGAAGGGGGAAATATAGCAGGTATCGATCTTAATTTT
GGTTGCCCACAGAAATGTGCTGAGATCGGAATGTATGGTGCATACCTTGT
TCAGAAGGATTCTGACACCGCTGTGGCCATGGTTAGGATTTTGGTTAAGG
AATTAGGCGTGCCCGTTTCGTGTAAGTTGCGTTGTATAGGAGGAGTGGAG
GCAACCGTTTCTTTTGCGCAGCGTTTGGAGGAGGCAGGGGCAGCGCTGTT
GACCGTGCATGGTCGGACGCCACATCAGAGAGATCATCAGGCGATAAGTG
ATTTCGATGTAATCCGTGCGGTGCGAGAAGCGGTCTCGATCCCTGTCTTG
GCGAATGGGAATTGTCGTACACGGCAGGATGCGGAATGTGCGTTGCGTTA
TACTGGGTGTGACGGCATGATGAGTGCGGTGGGGCTCCTTCGAAATCCGA
GACTTTTTGCTGCTCCTGCTGATACAATTGCTCCAGCTGACGCTGCTCTC
ACATCAAGCGGCACCCTCACTAACCCCAGGGTCGCTTTTGCCTGTGCCTG
GGAATACCTCGAGCTCGCTGAAGCTTTCCCACCGCCCGAGCCCCGTTGTG
TGCGTGATCATCTCCAGGTCATACTACAGGGAGTGTTGCAATTTAAAGAG
GTAGCTCTGTGGAATCTGTTGGGGAGTGATCGCATGGTTTTGAACAAACA
ATTCAGAGAGTTGTTGCGACTTGGCGCGGTTCTCTGCGCGAGTCGCTCGG
AGGAGGGAATGAAGGTAGGAAAAGAAGGAGAAGGAGGAGTGTTGACGTTG
CAGGAGATTAAGTCATTGCATAGGCGGGGGGATAAAAACGAGGAGGAGCA
ACAGGAAGGGGACGGGAAAGGTTTTGTTTGGGGTGGATTGTTCGAAGAGG
AGGGGGAGGAGGAAAATGAGGAGAAGGAGGAGAAGGAGGAGAAAGATGAC
CCGAAGGATGAGAATCTAGTCTATGCGCTTGAGGTGCAAGTGCCATGGTC
CCGTCGGCTGCTGGATGGAAGCAAGACTGTTGAGACTCGTGGGTATGACT
TGCCTTTACATTTGTGGGGACATCCTATTCTCTTGCTTGAGTCTCCTGCT
GGAGGAGGTTTGGCCAAGCACGGTCGAGATGCAGGAAAGACGGTGGGTGT
TGTCGTCTTTGGGAGGAGTAAGAGATACCGTTCGAGGGCAGAATGGGTGG
ATGACGCGGACAAGCATGGGGTTGATCCGCAGGCAGGGCGGGAAGAATTT
GGCTGGTGTGAGCACAAGACAAAGTGGGGGTGGGAGGTTGATAACCTTGA
GGTATGGGGGGAGGAGCAGCGGAGGGGGGTGAGCCTGAGGGAAGAACAGA
GGATAGTTGGGAGTATTTTTTGTTTGGGAGAGGAGGGGGGAAAAAGAGAA
ATAGATGCTGATTTGCAGGTAGATATAATGGCGCCAAAAGGGGACCAAGG
AGTTGTTATGTGAATATAATAGAATCCAAGGTGCAACCTTTAATGAGCAT
TTATTTTGATGATAGCACAGACCTTCAGTGACGCGAACTCAATAATTATG
AATATGACATACTTTGTAAAAACGGTCAGCGA
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protein sequence of NO07G02420.1

>NO07G02420.1-protein ID=NO07G02420.1-protein|Name=NO07G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=639bp
MVAFRARSKWKRGWRRLRHDGTTSAGSTADEDAFTFYWLFIQARLNSPEW
PLPSPSRPISILGGIFGEVRQPLFVLAPMVLQSERAFRLLVQRYGVKLCF
SPMLLARNVLNHAETGKVECPYARELLRPCPQDKPVMAQLAGADPQLILA
AARRLWEGGNIAGIDLNFGCPQKCAEIGMYGAYLVQKDSDTAVAMVRILV
KELGVPVSCKLRCIGGVEATVSFAQRLEEAGAALLTVHGRTPHQRDHQAI
SDFDVIRAVREAVSIPVLANGNCRTRQDAECALRYTGCDGMMSAVGLLRN
PRLFAAPADTIAPADAALTSSGTLTNPRVAFACAWEYLELAEAFPPPEPR
CVRDHLQVILQGVLQFKEVALWNLLGSDRMVLNKQFRELLRLGAVLCASR
SEEGMKVGKEGEGGVLTLQEIKSLHRRGDKNEEEQQEGDGKGFVWGGLFE
EEGEEENEEKEEKEEKDDPKDENLVYALEVQVPWSRRLLDGSKTVETRGY
DLPLHLWGHPILLLESPAGGGLAKHGRDAGKTVGVVVFGRSKRYRSRAEW
VDDADKHGVDPQAGREEFGWCEHKTKWGWEVDNLEVWGEEQRRGVSLREE
QRIVGSIFCLGEEGGKREIDADLQVDIMAPKGDQGVVM*
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Synonyms
Publications