Naga_100015g28, gene3009 (gene) Nannochloropsis gaditana

Overview
NameNaga_100015g28
Unique Namegene3009
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:795172..798835 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100015g28
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:795172..798835 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL129ngnoL129Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02600NO09G02600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3131rna3131-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3131rna3131Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3131

>rna3131-protein ID=rna3131-protein|Name=rna3131|organism=Nannochloropsis gaditana|type=polypeptide|length=777bp
MLFPSTVTTALNGRLQLQLWGLAWRRLPRHTRQCLEASPSFTSRPQERSF
AAFAALPRLTSPHARASLRSRPPASVVSSLPSSSLRSPFPGGAYGLTQRH
PRRGIIFRFMEHQKLKSLEMEANQGAMDANKQYRFLKELGKSYPEAVITR
YEGGRFAVNEGVTKEYLKALAKVGKLDSMPLRPLLQPMVAGGTEGGGRVA
AGVEGGREALGAAAGVGGPATSVGAGSSMAPAASALGGYDPSQPLYVTMV
EPGFKQQLWRTFRFTLFVFLVISGLSAMIDDKGISSKLMMSTNLHMAESS
DKRFSDVMGVDEAKQELEEIVLYLKDPSRFTRLGGKLPKGLLLLGPPGTG
KTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFEAAKKRAPCI
IFVDEIDAIGGARHLKDQQAMKMTLNQLLVELDGFEQNKGVIIIGATNFP
QSLDEALLRPGRFDKHVQVPLPDILGRKQILELYVKKIPTDSDVNMDVLA
RGTPGMSGAELSNLINEAALKASIDGLKAINMATFEWAKDKIMMGSERRS
AVISKETATVTAYHEGGHALVALKTGGADPVYKATIMPRGQALGMVTQLP
DGDQTSMSKKQIMARLDVCMGGRVAEELIFGAENVTSGASSDIQQATRLA
RAMVTQWGMSEAVGLVFHAKDGGEQSPETRAAIDREVKAILDASHLRAKE
LLVKHKGDLDLLAKALLDHETLTGPEIVDLLAGKKLSKPKVAPRATMAPP
SPAATPSPGSPAGATKPGILKGGRIGA
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Synonyms
Publications