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Properties
| Property Name | Value |
|---|
| Product | atp-dependent zinc metalloprotease ftsh mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100015g28.6381.mrna |
| Orig protein id | gnl|cribi|Naga_100015g28.6381 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:795172..798835 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3131 ID=rna3131|Name=rna3131|organism=Nannochloropsis gaditana|type=mRNA|length=1473bp
ATAGGAAAATGTTTGGACATGATTCAACCAACTGAAGCGGAGACCACTGG
ACCGAAAGCCCAGAGAAAATCGGACTCAGGCTACTCGAGTTACCGGCTGG
ACTGGTCACTGCGAGAGCATCCCAAGACAAAGGAAATGCTGCAAATGAGG
GTCAAGATTGCACACGTAATCCACGCCCTTGAAAACCTACGGCTTGAGTA
CCTGTATTCATCTCTCGGTGGCCTACCTTTACCAAACGCCCATCAACTTG
AAGCCGTTGTGCGTCTTCGTCCCAGTTCGTTGAACGCCTGCCCAGGCGGA
GTAATACCTACTTGGTCACAGCTGCAAACCTCTACCTTCGGTCAAGTATT
TTTAGAAAAGCTTGAGAAGCCCATCACGGAGATAGCAAGACGGCATAGTA
TCGACGAAGCGCGTGTCTTGGCGATTCTATTGCAGGCTGAAGATAAGGGA
AGTTCTGTAAATTGGACGCGCATGTCCGTCTCCTCCTGCTTAAAAGATTC
TGTGATGATCGCAGCAGAGGTGGCACGGCACATGGAAAAGGCGGCTGCGG
CATGCCCGCGGTTGCATCTAGGAGCAGAACTCGGCGGAATAGAGCCCTTC
TCTAAGAATTTCCCTTTGCCTGTCTTGATGCAACTCTTGCCTGACTGGCG
CCCGGCCGACGTTCTGGCAGGTATATGTGTGTTGCGGCAGACGCGTTCGA
AGACGCGGTCCCCTTGTAAGCAGCGGACCAGGCTCGCCAAATGCCTGCAG
GCGGACAAGGATCTCAACAAGGAAATGGAGGCAAGAGGCTCCACAGCCAG
CATGTCCATGTCAGAGGACGTGCATGCTCTCAGCGCATGGGCAAATTGCG
GGATGATCAGCGACGAGAGCAATCGTCCAAATGTGGCAGCGTGCGCTAGC
ATGGAAGACACTGGCAAGTCCGTAGACCGCCCGGAGGAGCAGGAAGAAGC
GTGCCCGCCTCTTCCAGAGCGTGGACAGGCCCAACGACGGCAGTGCAATC
CTTACCACGACAACAATCGGCATCCAGCCGATGCTAACGGTTCTGCAGCC
GCGGCCATGCTAGCATCCCCCCATCCTGAGCCGGCGACGTCACACGCAGC
AGTGTCGCCTGCCGCTCCCAACGCCTGCATCCTCGCCATGCTGAGTGTCC
ACAGTCACGAAGGACTGAGCGCCTCTGAATGCCTTCAGCTTCTGTCAGAC
GCGCATTGCGGTCATCGGCATGCGCTGGGCAACGGTGTGACGACGGTGGA
GGCCTGTCTGGGAGAACTACAGGAGAACTATGTCGCCTACCGGGGGGGGG
ATGGCAAATTTAGATTGTTATGATGCACTGAAGTCTAAAAGGAAAATTGT
AAAGTATTACAAATGGGACCGATGTACGCATTGGCCTTAAAACACCAGAG
AACTCGATAGCTAGACTTACTTCTCTTTGCAGTTTTGTATGCTAGGTAGA
CGTGAAATACAATACAGTGGCTC back to topprotein sequence of rna3131 >rna3131-protein ID=rna3131-protein|Name=rna3131|organism=Nannochloropsis gaditana|type=polypeptide|length=777bp
MLFPSTVTTALNGRLQLQLWGLAWRRLPRHTRQCLEASPSFTSRPQERSF
AAFAALPRLTSPHARASLRSRPPASVVSSLPSSSLRSPFPGGAYGLTQRH
PRRGIIFRFMEHQKLKSLEMEANQGAMDANKQYRFLKELGKSYPEAVITR
YEGGRFAVNEGVTKEYLKALAKVGKLDSMPLRPLLQPMVAGGTEGGGRVA
AGVEGGREALGAAAGVGGPATSVGAGSSMAPAASALGGYDPSQPLYVTMV
EPGFKQQLWRTFRFTLFVFLVISGLSAMIDDKGISSKLMMSTNLHMAESS
DKRFSDVMGVDEAKQELEEIVLYLKDPSRFTRLGGKLPKGLLLLGPPGTG
KTLLARAIAGEAGVPFFYASGSEFEEMYVGVGARRVRDLFEAAKKRAPCI
IFVDEIDAIGGARHLKDQQAMKMTLNQLLVELDGFEQNKGVIIIGATNFP
QSLDEALLRPGRFDKHVQVPLPDILGRKQILELYVKKIPTDSDVNMDVLA
RGTPGMSGAELSNLINEAALKASIDGLKAINMATFEWAKDKIMMGSERRS
AVISKETATVTAYHEGGHALVALKTGGADPVYKATIMPRGQALGMVTQLP
DGDQTSMSKKQIMARLDVCMGGRVAEELIFGAENVTSGASSDIQQATRLA
RAMVTQWGMSEAVGLVFHAKDGGEQSPETRAAIDREVKAILDASHLRAKE
LLVKHKGDLDLLAKALLDHETLTGPEIVDLLAGKKLSKPKVAPRATMAPP
SPAATPSPGSPAGATKPGILKGGRIGA back to topmRNA from alignment at CM002460.1:795172..798835- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3131 ID=rna3131|Name=rna3131|organism=Nannochloropsis gaditana|type=mRNA|length=3664bp|location=Sequence derived from alignment at CM002460.1:795172..798835- (Nannochloropsis gaditana)
CAAGTCTTGGCACGAGCCCGTGCACTATGCTGACCCACACGGGCCAGGGG
TTGTCATTGTGGAAGTCAGAATTGTCTCTTGACGAGTGCGGGGGGAGGGG
GGAATCTGGGGTCCCCCTGGTACCGTATCCATTCTCGATCATCACGCTCT
TGAGTTTTCTCGACCCGACTCAGCACCACGCCACCTTTTTGCCTTTGCAA
TGTTCTGTGATTTTCGTTTGCGCATGGGTAGATTTGTGCGAAAAAAGAGG
GCTCACCGACTTATTATACTACTTGCACTGAAAGGTCGCAGCAGTTGCGT
CGCATTTCTTGCAGGGAGGACAACCTTCCAGGCTGTAGGTGGCTTCCGTT
CGCATACTGTTGGCGTAGTTTACTGTGTACGAGGCACGACGAGGAGGCAC
ATAAGGGGACTTCTCATCTGTCATACAGTTGCGGAGTAAAGTGTTCACAG
GTACGCAAAGATGTATTGTTCTTGCCGGAGGAAAAAGTTCGTATGGGCAA
AGCGCTGCCGTACTTCAGCTACCCGTGGACGTGGTACCACTCTGAACGCT
CGAGAGCCGATGACTTGCTAGGCTGCCTAGCCCTGATGCAGGCGACGATA
GCTAGTCTACATGCTATGGTCCCATTTTCATTGGCTCAGGGCTGCTGTCC
TGAGGGCTTCATCATCTCTGTAAAAATCTCCTGACCACCTCACATAATCC
ACTCTCTCCCAGGGCGATTTTTGGCCTTATGCTGTTCCCTTCGACGGTGA
CCACGGCTTTGAATGGTCGCCTGCAGCTTCAGCTTTGGGGTTTGGCCTGG
CGCAGGCTCCCACGTCACACGCGTCAATGTTTGGAGGCCTCACCATCCTT
CACCTCCCGCCCTCAAGAGCGCTCGTTCGCAGCTTTTGCAGCACTCCCTC
GTCTGACCAGCCCGCACGCTCGAGCCTCATTGCGCTCACGTCCACCTGCC
AGTGTAGTTTCCTCCTTACCTTCGTCCTCGTTGCGAAGTCCTTTTCCCGG
CGGAGCTTACGGTCTGACTCAGAGGCATCCCCGCCGTGGGATCATCTTCC
GCTTTATGGAACACCAGAAGCTCAAGTCCTTGGAGATGGAGGCCAACCAA
GGCGCCATGGACGCAAATAAGCAGTACCGGTTCCTGAAAGAGCTGGGAAA
GAGCTACCCAGAGGCGGTGATTACTAGGTATGAGGGGGGAAGGTTTGCGG
TGAACGAGGGCGTGACAAAAGAGTACCTGAAGGCTTTGGCCAAGGTGGGG
AAACTGGACAGCATGCCCCTGCGTCCGCTCTTGCAGCCAATGGTTGCCGG
GGGCACTGAGGGAGGGGGAAGGGTTGCAGCCGGCGTGGAGGGAGGGCGGG
AGGCTTTGGGAGCGGCGGCTGGGGTTGGAGGACCGGCGACGTCCGTAGGG
GCAGGGTCGAGCATGGCGCCCGCAGCGTCAGCTTTAGGAGGCTACGATCC
AAGCCAACCCCTGTACGTGACCATGGTAGAGCCAGGCTTCAAGCAACAGT
TGTGGCGGACGTTCCGGTTTACTTTGTTCGTATTTCTGGTTATCTCGGGT
CTCTCGGCCATGATCGACGACAAAGGCATCTCCAGCAAGCTCATGATGTC
CACCAACCTGCACATGGCTGAGTCCTCCGACAAGCGCTTCTCGGACGTGA
TGGGCGTGGACGAGGCCAAGCAAGAGCTGGAGGAAATCGTGCTCTACCTG
AAAGACCCGTCCCGGTTCACCCGCCTGGGCGGGAAGCTCCCGAAAGGATT
GTTGTTGCTCGGCCCCCCGGGAACAGGGAAGACGCTATTGGCCAGGGCCA
TTGCGGGGGAGGCAGGAGTGCCTTTTTTCTATGCTTCGGGCTCGGAATTC
GAGGAGATGTACGTGGGGGTGGGGGCACGGCGGGTCAGGGACCTGTTCGA
GGCGGCCAAGAAGCGCGCGCCTTGCATCATCTTCGTGGACGAGATCGATG
CGATCGGAGGGGCCCGACACTTGAAGGATCAGCAGGCGATGAAAATGACG
CTGAATCAGCTGCTGGTGGAGCTCGATGGCTTCGAGCAGAACAAGGGCGT
GATTATCATCGGCGCCACCAATTTTCCCCAGTCCCTGGACGAAGCCTTGC
TGCGCCCGGGTCGCTTCGACAAGCACGTGCAGGTCCCCCTCCCGGATATC
CTGGGCCGAAAGCAAATTCTCGAGTTGTACGTGAAGAAAATCCCCACCGA
TTCGGACGTAAACATGGATGTCTTGGCTAGGGGCACCCCGGGAATGAGTG
GCGCAGAGCTCTCCAACCTGATCAACGAGGCCGCGTTGAAAGCCTCCATC
GACGGCTTGAAGGCCATCAACATGGCTACCTTCGAGTGGGCCAAGGACAA
AATCATGATGGGCTCAGAACGCCGCTCGGCGGTTATTTCCAAGGAAACGG
CCACGGTGACGGCCTACCACGAAGGGGGGCACGCGCTAGTGGCCCTCAAG
ACAGGGGGGGCGGACCCGGTGTACAAGGCGACCATCATGCCGCGGGGACA
GGCTCTGGGGATGGTGACGCAACTGCCAGATGGCGACCAGACGAGCATGA
GTAAGAAGCAGATCATGGCGCGGTTGGACGTGTGCATGGGGGGGCGGGTG
GCGGAGGAGCTGATCTTCGGCGCGGAGAATGTGACCAGCGGGGCAAGCTC
GGATATTCAGCAGGCCACGCGGTTGGCCCGGGCGATGGTGACGCAATGGG
GGATGAGCGAGGCAGTGGGTCTGGTCTTTCACGCGAAGGATGGGGGCGAG
CAGAGTCCTGAGACGCGGGCCGCCATCGACAGAGAGGTGAAGGCCATTCT
GGACGCCTCGCACCTCCGAGCCAAGGAGCTCCTTGTGAAACACAAGGGCG
ACCTGGACCTGCTCGCCAAGGCGCTCTTGGATCACGAGACGCTAACTGGT
CCTGAGATTGTTGACCTTTTGGCGGGAAAGAAATTGAGCAAGCCCAAGGT
CGCGCCGCGCGCCACTATGGCCCCTCCTAGCCCGGCAGCGACGCCATCGC
CGGGGTCACCAGCAGGGGCAACGAAGCCAGGAATATTGAAAGGGGGGAGG
ATCGGGGCGTGACAAGGGAGACAGGGAGAGGGTATGAAGGACGGATACGC
TGCCTGACTTCAATGGCGGTGGAAAGTGAAGAGGGTCCCATGCGGGGGAC
TCGTGTGAATAAATTTCTCAGGCAGATTTATGTATGCATTGGGTAAGAAT
ACCGAATAGCAGGAATGAAAGTTTTTATAAAAGTGATGGTATATTACGGT
GTCAGTCGCGGGGCAAATTGTAGCGTGTATTCTATCGAACGATTTTGCTC
GAGGCTATTATCACGGGCAAAGAAAGGCAAGCGCGGGCTCCGCGAGCAAA
GAAGCGGCAGTCTTGTTTTTCAAATTAGCGGAAATGGTTCGCACGCTCCT
GTCCTAGGATTGCGATGACTCGATGCATAAACAAATTTGTTCAAAAATAA
CTCACCTCTTTTGATCCGAGCACAAACTGATCCGCCTGGCCATTCATTTG
TCTCGCTGTGTGAGGCAGCAAGGCCACAGGACGCACCATGCAGCAATAGA
AAGTATAGTTTGATCCGATGTTCCTCTGTTGAAAGCAAAAAAAAGTTAAT
GCATTCAAGAAGTCTCGAGCACATCTTAGAACCGGCATTTGCTTGGGAAT
ATAACGATCGTATC back to topCoding sequence (CDS) from alignment at CM002460.1:795172..798835- >rna3131 ID=rna3131|Name=rna3131|organism=Nannochloropsis gaditana|type=CDS|length=2334bp|location=Sequence derived from alignment at CM002460.1:795172..798835- (Nannochloropsis gaditana)
ATGCTGTTCCCTTCGACGGTGACCACGGCTTTGAATGGTCGCCTGCAGCT
TCAGCTTTGGGGTTTGGCCTGGCGCAGGCTCCCACGTCACACGCGTCAAT
GTTTGGAGGCCTCACCATCCTTCACCTCCCGCCCTCAAGAGCGCTCGTTC
GCAGCTTTTGCAGCACTCCCTCGTCTGACCAGCCCGCACGCTCGAGCCTC
ATTGCGCTCACGTCCACCTGCCAGTGTAGTTTCCTCCTTACCTTCGTCCT
CGTTGCGAAGTCCTTTTCCCGGCGGAGCTTACGGTCTGACTCAGAGGCAT
CCCCGCCGTGGGATCATCTTCCGCTTTATGGAACACCAGAAGCTCAAGTC
CTTGGAGATGGAGGCCAACCAAGGCGCCATGGACGCAAATAAGCAGTACC
GGTTCCTGAAAGAGCTGGGAAAGAGCTACCCAGAGGCGGTGATTACTAGG
TATGAGGGGGGAAGGTTTGCGGTGAACGAGGGCGTGACAAAAGAGTACCT
GAAGGCTTTGGCCAAGGTGGGGAAACTGGACAGCATGCCCCTGCGTCCGC
TCTTGCAGCCAATGGTTGCCGGGGGCACTGAGGGAGGGGGAAGGGTTGCA
GCCGGCGTGGAGGGAGGGCGGGAGGCTTTGGGAGCGGCGGCTGGGGTTGG
AGGACCGGCGACGTCCGTAGGGGCAGGGTCGAGCATGGCGCCCGCAGCGT
CAGCTTTAGGAGGCTACGATCCAAGCCAACCCCTGTACGTGACCATGGTA
GAGCCAGGCTTCAAGCAACAGTTGTGGCGGACGTTCCGGTTTACTTTGTT
CGTATTTCTGGTTATCTCGGGTCTCTCGGCCATGATCGACGACAAAGGCA
TCTCCAGCAAGCTCATGATGTCCACCAACCTGCACATGGCTGAGTCCTCC
GACAAGCGCTTCTCGGACGTGATGGGCGTGGACGAGGCCAAGCAAGAGCT
GGAGGAAATCGTGCTCTACCTGAAAGACCCGTCCCGGTTCACCCGCCTGG
GCGGGAAGCTCCCGAAAGGATTGTTGTTGCTCGGCCCCCCGGGAACAGGG
AAGACGCTATTGGCCAGGGCCATTGCGGGGGAGGCAGGAGTGCCTTTTTT
CTATGCTTCGGGCTCGGAATTCGAGGAGATGTACGTGGGGGTGGGGGCAC
GGCGGGTCAGGGACCTGTTCGAGGCGGCCAAGAAGCGCGCGCCTTGCATC
ATCTTCGTGGACGAGATCGATGCGATCGGAGGGGCCCGACACTTGAAGGA
TCAGCAGGCGATGAAAATGACGCTGAATCAGCTGCTGGTGGAGCTCGATG
GCTTCGAGCAGAACAAGGGCGTGATTATCATCGGCGCCACCAATTTTCCC
CAGTCCCTGGACGAAGCCTTGCTGCGCCCGGGTCGCTTCGACAAGCACGT
GCAGGTCCCCCTCCCGGATATCCTGGGCCGAAAGCAAATTCTCGAGTTGT
ACGTGAAGAAAATCCCCACCGATTCGGACGTAAACATGGATGTCTTGGCT
AGGGGCACCCCGGGAATGAGTGGCGCAGAGCTCTCCAACCTGATCAACGA
GGCCGCGTTGAAAGCCTCCATCGACGGCTTGAAGGCCATCAACATGGCTA
CCTTCGAGTGGGCCAAGGACAAAATCATGATGGGCTCAGAACGCCGCTCG
GCGGTTATTTCCAAGGAAACGGCCACGGTGACGGCCTACCACGAAGGGGG
GCACGCGCTAGTGGCCCTCAAGACAGGGGGGGCGGACCCGGTGTACAAGG
CGACCATCATGCCGCGGGGACAGGCTCTGGGGATGGTGACGCAACTGCCA
GATGGCGACCAGACGAGCATGAGTAAGAAGCAGATCATGGCGCGGTTGGA
CGTGTGCATGGGGGGGCGGGTGGCGGAGGAGCTGATCTTCGGCGCGGAGA
ATGTGACCAGCGGGGCAAGCTCGGATATTCAGCAGGCCACGCGGTTGGCC
CGGGCGATGGTGACGCAATGGGGGATGAGCGAGGCAGTGGGTCTGGTCTT
TCACGCGAAGGATGGGGGCGAGCAGAGTCCTGAGACGCGGGCCGCCATCG
ACAGAGAGGTGAAGGCCATTCTGGACGCCTCGCACCTCCGAGCCAAGGAG
CTCCTTGTGAAACACAAGGGCGACCTGGACCTGCTCGCCAAGGCGCTCTT
GGATCACGAGACGCTAACTGGTCCTGAGATTGTTGACCTTTTGGCGGGAA
AGAAATTGAGCAAGCCCAAGGTCGCGCCGCGCGCCACTATGGCCCCTCCT
AGCCCGGCAGCGACGCCATCGCCGGGGTCACCAGCAGGGGCAACGAAGCC
AGGAATATTGAAAGGGGGGAGGATCGGGGCGTGA back to top
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