NO09G02600, NO09G02600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02600 vs. NCBI_GenBank
Match: EWM27565.1 (atp-dependent zinc metalloprotease ftsh mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 216.9 bits (551), Expect = 7.200e-53 Identity = 132/226 (58.41%), Postives = 148/226 (65.49%), Query Frame = 0 Query: 5 SLLGSTIAGRLQVQLWGLAWRRLPHKARQVLAASPSFASTARDSSCNAFATLPRVTA-SSRSSARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYGLTPQAPTSQLQQQRRGIIFRFMEHQKLKSLEMEANQASTDPNKQYRFLKELGKSYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMPLQPLLQPLVATAAEGGG---AGREGAREGM 227 S + + + GRLQ+QLWGLAWRRLP RQ L ASPSF S ++ S AFA LPR+T+ +R+S R+ YGLT + P RRGIIFRFMEHQKLKSLEMEANQ + D NKQYRFLKELGKSYPEAVI RYEGG FAVNEGVTKEYLKALAKVGKLDSMPL+PLLQP+VA EGGG AG EG RE + Sbjct: 5 STVTTALNGRLQLQLWGLAWRRLPRHTRQCLEASPSFTSRPQERSFAAFAALPRLTSPHARASLRS----------RPPASVVSSLPSSSLRSPFPGGAYGLTQRHP-------RRGIIFRFMEHQKLKSLEMEANQGAMDANKQYRFLKELGKSYPEAVITRYEGGR---FAVNEGVTKEYLKALAKVGKLDSMPLRPLLQPMVAGGTEGGGRVAAGVEGGREAL 210
BLAST of NO09G02600 vs. NCBI_GenBank
Match: GAX96857.1 (cell division protease ftsH [Pythium insidiosum]) HSP 1 Score: 69.3 bits (168), Expect = 1.900e-8 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 0 Query: 115 QQQRRGIIFRFMEH---QKLKSLEMEANQASTDPNKQYRFLKELGKSYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMPLQPLL 205 Q R IF E ++LKSLE +AN D +Q+RFL+EL K YP VI R E FAV+E + KEY+KAL K G++DS+ + +L Sbjct: 43 QNGNRRTIFNMTERSRMRQLKSLEHDANLHPEDAFRQFRFLQELNKHYPALVIRRVEENR---FAVDENIQKEYVKALVKTGRIDSLDMNQVL 132
BLAST of NO09G02600 vs. NCBI_GenBank
Match: XP_008903188.1 (hypothetical protein PPTG_10276 [Phytophthora parasitica INRA-310] >ETI50847.1 hypothetical protein F443_05675 [Phytophthora parasitica P1569] >ETL44161.1 hypothetical protein L916_05476 [Phytophthora parasitica] >ETM50484.1 hypothetical protein L914_05486 [Phytophthora parasitica] >ETN11381.1 hypothetical protein PPTG_10276 [Phytophthora parasitica INRA-310] >ETO79587.1 hypothetical protein F444_05727 [Phytophthora parasitica P1976] >ETP20632.1 hypothetical protein F441_05683 [Phytophthora parasitica CJ01A1] >ETP48565.1 hypothetical protein F442_05721 [Phytophthora parasitica P10297]) HSP 1 Score: 68.2 bits (165), Expect = 4.200e-8 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 0 Query: 129 QKLKSLEMEANQASTDPNKQYRFLKELGK-SYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMPLQPLLQPLVATAAEGGGAGREGARE 225 ++LKSLE AN DP Q RFL+EL + +YP V+ R E FA++E V KEY+KAL K G+LD++ L L +P AE AG E AR+ Sbjct: 47 KQLKSLEQAANANPEDPYAQLRFLQELNRNNYPALVVRRVEENR---FALDEAVQKEYIKALVKTGRLDTVDLPQLARP-----AEASYAGAEAARQ 135
BLAST of NO09G02600 vs. NCBI_GenBank
Match: ETK90748.1 (hypothetical protein L915_05537 [Phytophthora parasitica] >ETL97333.1 hypothetical protein L917_05364 [Phytophthora parasitica] >KUF79410.1 ATP-dependent zinc metalloprotease FTSH 4 [Phytophthora nicotianae]) HSP 1 Score: 68.2 bits (165), Expect = 4.200e-8 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 0 Query: 129 QKLKSLEMEANQASTDPNKQYRFLKELGK-SYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMPLQPLLQPLVATAAEGGGAGREGARE 225 ++LKSLE AN DP Q RFL+EL + +YP V+ R E FA++E V KEY+KAL K G+LD++ L L +P AE AG E AR+ Sbjct: 20 KQLKSLEQAANANPEDPYAQLRFLQELNRNNYPALVVRRVEENR---FALDEAVQKEYIKALVKTGRLDTVDLPQLARP-----AEASYAGAEAARQ 108
BLAST of NO09G02600 vs. NCBI_GenBank
Match: XP_002909608.1 (cell division protease ftsH [Phytophthora infestans T30-4] >EEY58422.1 cell division protease ftsH [Phytophthora infestans T30-4]) HSP 1 Score: 67.4 bits (163), Expect = 7.100e-8 Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0 Query: 129 QKLKSLEMEANQASTDPNKQYRFLKELGK-SYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMPLQPLLQPLVATAAEGGGAGREGARE--GMMSSG 231 ++LKSLE AN DP Q RFL+EL + +YP V+ R E FA++E V KEY+KAL K G+LD++ L L +P EG AG + AR+ G+ ++G Sbjct: 51 KQLKSLEQAANANPEDPYTQLRFLQELNRNNYPALVVRRVEENR---FALDEAVQKEYIKALVKTGRLDTVDLPKLARP-----TEGAYAGADAARQFGGLAAAG 147
BLAST of NO09G02600 vs. NCBI_GenBank
Match: POM57630.1 (Cell division protease ftsH [Phytophthora palmivora var. palmivora]) HSP 1 Score: 67.4 bits (163), Expect = 7.100e-8 Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 0 Query: 110 PTSQLQQQRRGIIFRFMEHQK---LKSLEMEANQASTDPNKQYRFLKELGK-SYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMPLQPLLQPLVATAAEGGGAGREGAREGMMSSGQYG 234 P LQ R +F + K LKSLE AN D Q RFL+EL + +YP V+ R E FA++E V KEY+KAL K G+LD++ L L QP+ A A GA R+ ++ G G Sbjct: 32 PPQPLQPASRRSLFNLTQRGKLKQLKSLEQSANANPEDSYAQLRFLQELNRCNYPALVVRRVEENR---FALDEAVQKEYIKALVKTGRLDTVDLPQLTQPVEAAA----GAARQFNAGPAVTRGSQG 152
BLAST of NO09G02600 vs. NCBI_GenBank
Match: CEP00631.1 (hypothetical protein PBRA_001685 [Plasmodiophora brassicae]) HSP 1 Score: 65.9 bits (159), Expect = 2.100e-7 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 0 Query: 123 FRF---MEHQKLKSLEMEANQASTDPNKQYRFLKELGKSYPEAVINRYEGGAGKVFAVNEGVTKEYLKALAKVGKLDSMP---LQPLLQPLVATAAEGGGAGRE 221 FRF + Q L+SLE AN DP++Q F++ LGK +P+AV+ R++ G +A + V EY+KAL + G+L+SMP L+ L V A+ A E Sbjct: 19 FRFLSDLSEQSLRSLESMANSQPNDPHRQLMFMRALGKDHPKAVVERFQTGQ---YAESPEVVAEYIKALGQTGRLESMPETELRQLFSRAVGNASPSAAAAPE 119 The following BLAST results are available for this feature:
BLAST of NO09G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02600 ID=NO09G02600|Name=NO09G02600|organism=Nannochloropsis oceanica|type=gene|length=738bpback to top protein sequence of NO09G02600.1 >NO09G02600.1-protein ID=NO09G02600.1-protein|Name=NO09G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bpback to top Synonyms
Publications
|