Naga_100008g46, gene2560 (gene) Nannochloropsis gaditana

Overview
NameNaga_100008g46
Unique Namegene2560
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:942578..943991 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100008g46
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:942578..943991 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL120ngnoL120Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03990NO05G03990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2677rna2677-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2677rna2677Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2677

>rna2677-protein ID=rna2677-protein|Name=rna2677|organism=Nannochloropsis gaditana|type=polypeptide|length=368bp
MCTSLRSDMAFRCALCSRRNAETDILIRSKCQKSIIGAGSRQQGMLRRGL
RQQGGHLAFYCQISKDFRRSETQHDVGDKRYKALYTTVAASAGLDDMRRR
VGGFPKQEEKALNWPLGRNKEMGRRKFTSLPSPETASKGDGKRMPDESAE
EGEKHPPDSSPPLFLCPAQRFFRLLAAASLTQVTFWTSYAFLPSELSGSM
SYWGIVGSGAFVLIARHFAMVCCDCSPLRIFPRPIISFDTFLQHYVWEMD
QISPVAFRIATHTFWGNKGPDRIVQIGTSQCQHTSRYIAAKIKGDSFYYL
LDIKEGKFGSENAKEQIIRMFQGLRTDAQGQHLVRGVDGDNEDSAEQSDI
ARRKSGGRRWKGGWKGKA
back to top
Synonyms
Publications