|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g46.7918.mrna |
| Orig protein id | gnl|cribi|Naga_100008g46.7918 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:942578..943991 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2677 ID=rna2677|Name=rna2677|organism=Nannochloropsis gaditana|type=mRNA|length=972bp
ATGGCGGTAACTGCAGTTATGTCGCCTTCTTCACACTTGATCAGACCATT
GAAAGAAAACATTCCTTCTCCCAAGGCCGACGCCGGAGCTGCCCCGGCCC
TTGTCACAATCCACGGCGACGACGGTTGCAGCTTATGCATCGAATGCGGC
AAGCCCGTCACAGAGGGCCTTTACAGGGAATATTCGAAGGATAATATCCG
TCTATCGAGATGTGAATTTTGTGGCGCAGTTGCAGACCGACTGATCGAGT
ATGAGCTCGTGCTCGTCGGACTGGATTTAGCCCTCCACAGGTTGCCTGCG
TGGCGGCATATTCTCTTCAATCGACAGCCGCACGCCAAACTAGAATTTGC
ACAGCTTTGGCGCATGGCATTGGTTCTGACGCTGGTCGACACACACATCA
AATATGCCATATACGTGCACTACTCCTCCATCTCTCCTCCAAATCACCTC
GATTTGACCGACACGCCTAAATACCAACTTTCTCTGCTTCTCCGCATCCT
GCTCCTTTCATTTGTAGAGCACTTCGTATTTTTCGGGATAATCGTGTTTC
TGACAACTTGGATGTTGGCTGTCCGTCTTCATCTGTGTCGCCCTCAACTA
CGAGGTCCTGCCAGCACTCCATACACCCGCACATTTGTGACACGCAAATT
GGTACAGGCCCTTCTATTTCCGAACTTTGGTCGATGCATCGTCATATTTG
TGATGGTTTGGGACCCTGCTTTTGTGGTGGCGAACCTCATCAGCCTTTTG
GTCCTTTTGTCCCAATGGCAGGCTCTCCGGGCGGTTGTTGCCGCAGCCAT
AGCCCTGAATGAAAGATACAATCAGCAGAGGAAAGAAGATAGTGTAAAAA
GGGGAAATGTAGAGTTTTACGCAGCAGCTCTACCATTTGTGGTCGGCTTG
TCTTGTAAGTGCTTGCTACGTCTTGTCGCGTTCCACGTGGACGCGTCATG
CACGAATTTGTACCTGGTCTAA back to topprotein sequence of rna2677 >rna2677-protein ID=rna2677-protein|Name=rna2677|organism=Nannochloropsis gaditana|type=polypeptide|length=368bp
MCTSLRSDMAFRCALCSRRNAETDILIRSKCQKSIIGAGSRQQGMLRRGL
RQQGGHLAFYCQISKDFRRSETQHDVGDKRYKALYTTVAASAGLDDMRRR
VGGFPKQEEKALNWPLGRNKEMGRRKFTSLPSPETASKGDGKRMPDESAE
EGEKHPPDSSPPLFLCPAQRFFRLLAAASLTQVTFWTSYAFLPSELSGSM
SYWGIVGSGAFVLIARHFAMVCCDCSPLRIFPRPIISFDTFLQHYVWEMD
QISPVAFRIATHTFWGNKGPDRIVQIGTSQCQHTSRYIAAKIKGDSFYYL
LDIKEGKFGSENAKEQIIRMFQGLRTDAQGQHLVRGVDGDNEDSAEQSDI
ARRKSGGRRWKGGWKGKA back to topmRNA from alignment at CM002459.1:942578..943991+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2677 ID=rna2677|Name=rna2677|organism=Nannochloropsis gaditana|type=mRNA|length=1414bp|location=Sequence derived from alignment at CM002459.1:942578..943991+ (Nannochloropsis gaditana)
ATGTGCACTTCTTTGAGAAGTGACATGGCTTTTCGATGTGCTCTTTGCTC
TCGAAGAAATGCGGAGACTGATATTTTGATCAGGAGTAAATGTCAAAAAT
CTATTATCGGCGCAGGTTCACGACAGCAAGGGATGCTACGACGCGGGTTG
AGGCAACAAGGGGGCCATCTTGCTTTCTATTGCCAAATTTCCAAGGATTT
CAGACGAAGCGAAACTCAACATGATGTTGGCGACAAACGATATAAAGCTC
TCTATACCACTGTGGCGGCATCCGCTGGCTTGGACGACATGAGAAGACGT
GTCGGTGGTTTTCCAAAgcaagaagagaaggcgTTGAATTGGCCACTCGG
TCGAAATAAGgagatgggaagaagaaaatttACCTCACTACCAAGTCCTG
AGACAGCTTCAAaaggggatggaaaaagaatgCCTGACGAGagtgccgag
gagggagagaagcatCCACCAGATTCATCGCCACCGCTTTTTCTATGTCC
GGCACAGGTGCGTCCTGTCCCCTTGCAACAACCTCTTTCAGAAGAGTTCC
AGTGTTTCGAGGAATCCCATGTCCTGTTGGTTGATTACGGTGTCCTATAA
GAGGTTGACTCGCGCGTGACCTTCCGTTCCTGCGATGTAGCGTCTTACAT
TCCCTCGACACATGTCGTATACACTTTGTGCCATCTTGGTGTACCAATAT
GCAGCGCTTCTTCCGGCTTCTTGCGGCAGCATCTCTTACACAAGTGACAT
TTTGGACCTCGTacgccttcctgccttcaGAATTGAGTGGCAGTATGAGC
TACTGGGGCATTGTTGGCTCGGGCGCCTTTGTATTGATTGCACGGCATTT
TGCGATGGTATGTTGTGATTGTTCCCCCTTGCGTATTTTTCCACGTCCCA
TCATCTCATTCGATACTTTCTTGCAGCACTACGTGTGGGAAATGGATCAA
ATTTCTCCAGTCGCTTTTCGAATTGCCACCCACACCTTCTGGGGCAATAA
AGGGCCCGATCGCATCGTGCAAATCGGCACAAGTCAATGCCAGCACACAT
CCCGGTACAGTCTGTGTTCCCTTTGGCTTTTTTATTGTTCATTTTTATCG
TGTAACGGCGATTATGCCTACCTTGATTCCATTTCATTTTCCCATTTCTA
TGCCATTTTTTCAGTTATATCGCCGCGAAGATCAAGGGTGACTCCTTCTA
TTACCTTCTTGACAtcaaggaaggaaaattcGGAAGTGAGAATGCGAAAG
AGCAGATCATTCGCATGTTTCAAGGACTAAGAACGGACGCGCAGGGGCAG
CATCTCGTCAGAGGGGTGGACGGTGACAATGAAGATAGTGCAGAGCAAAG
TGATATCGCTCGACGAAAAAGTGGTGGTCGGCGATGGAAGGGcggatgga
agggaaaagcatGA back to topCoding sequence (CDS) from alignment at CM002459.1:942578..943991+ >rna2677 ID=rna2677|Name=rna2677|organism=Nannochloropsis gaditana|type=CDS|length=3321bp|location=Sequence derived from alignment at CM002459.1:942578..943991+ (Nannochloropsis gaditana)
ATGTGCACTTCTTTGAGAAGTGACATGGCTTTTCGATGTGCTCTTTGCTC
TCGAAGAAATGCGGAGACTGATATTTTGATCAGGAGTAAATGTCAAAAAT
CTATTATCGGCGCAGGTTCACGACAGCAAGGGATGCTACGACGCGGGTTG
AGGCAACAAGGGGGCCATCTTGCTTTCTATTGCCAAATTTCCAAGGATTT
CAGACGAAGCGAAACTCAACATGATGTTGGCGACAAACGATATAAAGCTC
TCTATACCACTGTGGCGGCATCCGCTGGCTTGGACGACATGAGAAGACGT
GTCGGTGGTTTTCCAAAgcaagaagagaaggcgTTGAATTGGCCACTCGG
TCGAAATAAGgagatgggaagaagaaaatttACCTCACTACCAAGTCCTG
AGACAGCTTCAAaaggggatggaaaaagaatgCCTGACGAGagtgccgag
gagggagagaagcatCCACCAGATTCATCGCCACCGCTTTTTCTATGTCC
GGCACAGCGCTTCTTCCGGCTTCTTGCGGCAGCATCTCTTACACAAGTGA
CATTTTGGACCTCGTacgccttcctgccttcaGAATTGAGTGGCAGTATG
AGCTACTGGGGCATTGTTGGCTCGGGCGCCTTTGTATTGATTGCACGGCA
TTTTGCGATGGTATGTTGTGATTGTTCCCCCTTGCGTATTTTTCCACGTC
CCATCATCTCATTCGATACTTTCTTGCAGCACTACGTGTGGGAAATGGAT
CAAATTTCTCCAGTCGCTTTTCGAATTGCCACCCACACCTTCTGGGGCAA
TAAAGGGCCCGATCGCATCGTGCAAATCGGCACAAGTCAATGCCAGCACA
CATCCCGTTATATCGCCGCGAAGATCAAGGGTGACTCCTTCTATTACCTT
CTTGACAtcaaggaaggaaaattcGGAAGTGAGAATGCGAAAGAGCAGAT
CATTCGCATGTTTCAAGGACTAAGAACGGACGCGCAGGGGCAGCATCTCG
TCAGAGGGGTGGACGGTGACAATGAAGATAGTGCAGAGCAAAGTGATATC
GCTCGACGAAAAAGTGGTGGTCGGCGATGGAAGGGcggatggaagggaaa
agcatGAATGTGCACTTCTTTGAGAAGTGACATGGCTTTTCGATGTGCTC
TTTGCTCTCGAAGAAATGCGGAGACTGATATTTTGATCAGGAGTAAATGT
CAAAAATCTATTATCGGCGCAGGTTCACGACAGCAAGGGATGCTACGACG
CGGGTTGAGGCAACAAGGGGGCCATCTTGCTTTCTATTGCCAAATTTCCA
AGGATTTCAGACGAAGCGAAACTCAACATGATGTTGGCGACAAACGATAT
AAAGCTCTCTATACCACTGTGGCGGCATCCGCTGGCTTGGACGACATGAG
AAGACGTGTCGGTGGTTTTCCAAAgcaagaagagaaggcgTTGAATTGGC
CACTCGGTCGAAATAAGgagatgggaagaagaaaatttACCTCACTACCA
AGTCCTGAGACAGCTTCAAaaggggatggaaaaagaatgCCTGACGAGag
tgccgaggagggagagaagcatCCACCAGATTCATCGCCACCGCTTTTTC
TATGTCCGGCACAGCGCTTCTTCCGGCTTCTTGCGGCAGCATCTCTTACA
CAAGTGACATTTTGGACCTCGTacgccttcctgccttcaGAATTGAGTGG
CAGTATGAGCTACTGGGGCATTGTTGGCTCGGGCGCCTTTGTATTGATTG
CACGGCATTTTGCGATGGTATGTTGTGATTGTTCCCCCTTGCGTATTTTT
CCACGTCCCATCATCTCATTCGATACTTTCTTGCAGCACTACGTGTGGGA
AATGGATCAAATTTCTCCAGTCGCTTTTCGAATTGCCACCCACACCTTCT
GGGGCAATAAAGGGCCCGATCGCATCGTGCAAATCGGCACAAGTCAATGC
CAGCACACATCCCGTTATATCGCCGCGAAGATCAAGGGTGACTCCTTCTA
TTACCTTCTTGACAtcaaggaaggaaaattcGGAAGTGAGAATGCGAAAG
AGCAGATCATTCGCATGTTTCAAGGACTAAGAACGGACGCGCAGGGGCAG
CATCTCGTCAGAGGGGTGGACGGTGACAATGAAGATAGTGCAGAGCAAAG
TGATATCGCTCGACGAAAAAGTGGTGGTCGGCGATGGAAGGGcggatgga
agggaaaagcatGAATGTGCACTTCTTTGAGAAGTGACATGGCTTTTCGA
TGTGCTCTTTGCTCTCGAAGAAATGCGGAGACTGATATTTTGATCAGGAG
TAAATGTCAAAAATCTATTATCGGCGCAGGTTCACGACAGCAAGGGATGC
TACGACGCGGGTTGAGGCAACAAGGGGGCCATCTTGCTTTCTATTGCCAA
ATTTCCAAGGATTTCAGACGAAGCGAAACTCAACATGATGTTGGCGACAA
ACGATATAAAGCTCTCTATACCACTGTGGCGGCATCCGCTGGCTTGGACG
ACATGAGAAGACGTGTCGGTGGTTTTCCAAAgcaagaagagaaggcgTTG
AATTGGCCACTCGGTCGAAATAAGgagatgggaagaagaaaatttACCTC
ACTACCAAGTCCTGAGACAGCTTCAAaaggggatggaaaaagaatgCCTG
ACGAGagtgccgaggagggagagaagcatCCACCAGATTCATCGCCACCG
CTTTTTCTATGTCCGGCACAGCGCTTCTTCCGGCTTCTTGCGGCAGCATC
TCTTACACAAGTGACATTTTGGACCTCGTacgccttcctgccttcaGAAT
TGAGTGGCAGTATGAGCTACTGGGGCATTGTTGGCTCGGGCGCCTTTGTA
TTGATTGCACGGCATTTTGCGATGGTATGTTGTGATTGTTCCCCCTTGCG
TATTTTTCCACGTCCCATCATCTCATTCGATACTTTCTTGCAGCACTACG
TGTGGGAAATGGATCAAATTTCTCCAGTCGCTTTTCGAATTGCCACCCAC
ACCTTCTGGGGCAATAAAGGGCCCGATCGCATCGTGCAAATCGGCACAAG
TCAATGCCAGCACACATCCCGTTATATCGCCGCGAAGATCAAGGGTGACT
CCTTCTATTACCTTCTTGACAtcaaggaaggaaaattcGGAAGTGAGAAT
GCGAAAGAGCAGATCATTCGCATGTTTCAAGGACTAAGAACGGACGCGCA
GGGGCAGCATCTCGTCAGAGGGGTGGACGGTGACAATGAAGATAGTGCAG
AGCAAAGTGATATCGCTCGACGAAAAAGTGGTGGTCGGCGATGGAAGGGc
ggatggaagggaaaagcatGA back to top
|