Naga_100008g17, gene2536 (gene) Nannochloropsis gaditana

Overview
NameNaga_100008g17
Unique Namegene2536
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:885759..888893 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100008g17
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:885759..888893 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL120ngnoL120Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03740NO05G03740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2652rna2652-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2652rna2652Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2652

>rna2652-protein ID=rna2652-protein|Name=rna2652|organism=Nannochloropsis gaditana|type=polypeptide|length=1044bp
MAPETNPEPGRTELTNGTEARRSEGHAAPSSPVQSSISSSRDPHPVLRPR
AGFGNGIPHVSQRLVAGMPSFPGSPVSPSLVVTGHEDFRVQGHDNNALVH
DEVMAPLSQVVLPFHGTQERGQEVVFSSHAAGHPVASEHTPAQDDAGVEN
KEDGEKQNKKEGEVQTSNWSGIRRDAGSSETNGRRGVGIGAEEEEEEEED
EEEDEDDDGEDEQDEEDEEEEEEEEEEEDANEADDEEEDEEVVGEDEGNE
EEEDEADGGKEEIGRRHERENISSVQGTRAVVPVFRERHGGGRGALSGAS
VSHALPLAGGVLRMRRSRGVSSIQAANGSRVRPPSAGSVRASPAGSRLEP
PAPFASAGPSPSPRTCAEVSGEQAGRDAWVCPVCLQHFDEPCRLPRCTHT
FCKTCIQGIIRNLVAAHHQQQQHQQLSPPAPHCPLCRLKFTPAEVQPDQA
LSQEMSAARVRCGNARCERLMTPLESKRHQDECPYGVAPCPHQHHGCGFQ
TLRRDLGAHLSMCPYEQIKGLFPKIRQSNEHVTAAMRGWENAFVSQQQTL
ATHAASLRNLEHRSSFPLSRHLQLVTLLLWEPYLWLQQAERWSRSFSLRL
FAMQLYASPLVLILLKVAARSSPDMPREPGHESRRWFFPPATHYPAPIVG
ANCCPSSPCLGPPSSSASSLSFLTPWPAESAKEGDGQPQVCSLGMAPELA
WFVLILVVAVVLVEGLQDAPPVLSTELCIPLRPASWRAFFPGLPFPSNRR
RTSSYDPSSPAPPSVPPSQATPPAPRSDRTPQTHTGTPPASTGPHSSPFI
PLVLSVPIRYGEWLLQLATAWACYAFGGGRARADFSDASFPYLSSFISVR
YIALFLSLIPAMAVQTLTHRCKLEKPIVQGMVMGVCMYWVEWRALAGSLL
LEEFLHYGLIYACGQWLLVDSAEREGSVRWDAYVRRCIEEPGARFRGILL
LTLATIMLLVGQSWALVKGIFFRTTGTMVSFMFRMILGRFMKQTYQMPRP
PATSAAVRLLQEQGQWPPPGHYMLLASRTLLALSVMGIALVSLY
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Synonyms
Publications