Naga_100036g40, gene2433 (gene) Nannochloropsis gaditana

Overview
NameNaga_100036g40
Unique Namegene2433
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:626590..629870 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100036g40
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:626590..629870 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL121ngnoL121Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02670NO05G02670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2545rna2545-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2546rna2546-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2545rna2545Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2546rna2546Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2545

>rna2545-protein ID=rna2545-protein|Name=rna2545|organism=Nannochloropsis gaditana|type=polypeptide|length=551bp
MQAVLSTAEEAGMDVDAHMDGQAGGGAKDDTSNLTGANAESGSGANDDID
APNFDIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSL
NIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRT
GMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLN
VIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNY
DSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLD
RPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPEL
LLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEK
EIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRA
MLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARG
QGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGE
G
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protein sequence of rna2546

>rna2546-protein ID=rna2546-protein|Name=rna2546|organism=Nannochloropsis gaditana|type=polypeptide|length=539bp
MTLFIQDLLLKYMLLQKALPAFSSISHASKAHLLFWIYVYTADIDTYAAR
YAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLV
AGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQ
DLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFA
HVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGP
SGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENT
TFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVES
LYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMP
ARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSV
FVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARG
GDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG
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Synonyms
Publications